Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20626 | Canola | plastid | 81.06 | 81.74 |
| Bra018435.1-P | Field mustard | plastid | 80.56 | 81.1 |
| AT1G10510.1 | Thale cress | plastid | 80.4 | 80.0 |
| VIT_01s0026g00610.t01 | Wine grape | mitochondrion | 63.62 | 76.6 |
| CDY55048 | Canola | plastid | 75.42 | 76.05 |
| CDX93413 | Canola | plastid | 75.25 | 75.88 |
| KRH69472 | Soybean | nucleus | 64.62 | 64.19 |
| KRH74682 | Soybean | plastid | 63.29 | 62.87 |
| PGSC0003DMT400040302 | Potato | plastid | 61.79 | 61.08 |
| Solyc05g006170.2.1 | Tomato | plastid | 61.63 | 60.82 |
| GSMUA_Achr9P28160_001 | Banana | plastid | 58.47 | 57.05 |
| TraesCS7D01G196000.1 | Wheat | plastid | 52.82 | 51.79 |
| Os06t0237502-00 | Rice | plastid | 52.49 | 51.47 |
| TraesCS7A01G194400.1 | Wheat | plastid | 52.33 | 51.22 |
| TraesCS7B01G100000.1 | Wheat | plastid | 51.99 | 51.06 |
| HORVU7Hr1G039610.2 | Barley | cytosol, peroxisome, plastid | 52.16 | 49.61 |
| Zm00001d044774_P004 | Maize | plastid | 50.0 | 46.38 |
| KXG19681 | Sorghum | plastid | 50.33 | 46.05 |
| CDY16082 | Canola | cytosol | 4.82 | 25.66 |
| CDY02566 | Canola | cytosol | 7.48 | 22.73 |
| CDY44911 | Canola | cytosol | 9.14 | 21.91 |
| CDX93931 | Canola | cytosol | 11.96 | 21.3 |
| CDX92540 | Canola | cytosol | 17.61 | 18.93 |
| CDY56462 | Canola | cytosol, plastid | 16.45 | 18.5 |
| CDX89174 | Canola | plastid | 15.78 | 17.63 |
| CDX76683 | Canola | mitochondrion | 16.11 | 16.44 |
| CDY27720 | Canola | cytosol, mitochondrion | 6.48 | 16.05 |
| CDY05221 | Canola | cytosol, mitochondrion, nucleus, plastid | 4.15 | 13.09 |
| CDX93932 | Canola | cytosol | 1.83 | 9.57 |
Protein Annotations
| EnsemblPlants:CDY20954 | EnsemblPlantsGene:GSBRNA2T00015100001 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PFAM:PF13516 | ProteinID:CDY20954 |
| ProteinID:CDY20954.1 | SEG:seg | SMART:SM00368 | SUPFAM:SSF52047 | UniParc:UPI0004EDD6E8 | UniProt:A0A078G697 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA08g25710DBnaA08g25710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G697]
Coordinates
chrLK032115:+:58854..62268
Molecular Weight (calculated)
64474.6 Da
IEP (calculated)
7.208
GRAVY (calculated)
-0.119
Length
602 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSSSLC LHSLPKASSG LNQWRGGLRF EFRGSSASSS RRLFLSPAVV FLRQSPRLSA IRASAEGSSR RRGYKESQAV SGFPNAKVQQ VASSVLPVGS
101: FVVVTFVLWK VVEKFMSPKT SSAGDSKSST EGVKWSIGAG TNLLQGFAAK VDRENKQRLN EFAKELRSFR SVDMSGCNFG DEGLFFLAES LGYNQTVEEV
201: SFSANGITAA GVKAFDGVLQ SNIMLKVLNL SGNPIGDEGA KSLCATLMEN SSVEVLQLNS TDLGDEGAKE IAELLKRNST LRVIELNNNM IDYSGFTSLA
301: GALPENNTIR NLHLNGNYGG ALGANALSKG LEGNKSLREL HLHGNSIGDE GIRALMAGLS SHKGKLALLD LGNNSITAKG AFYVAEYIKR SKCLVWLNLY
401: MNDIGDEGAE KVADALKQNR SIATIDIGGN NIHAEGVNAI AQALKDNAII TTLEVGYNPI GPDGAKALSE ILKFHGNVKT LKLGWCQIAA KGAEYVADML
501: RYNNTISVLD LRANGLRDEG ASCLARSLKV VNEALTSVDL GFNEIRDDGA FSIAQALKAN EDVTVTSINL GNNFITKFGQ SALTDARDHV LEMTEKEVEI
601: FF
101: FVVVTFVLWK VVEKFMSPKT SSAGDSKSST EGVKWSIGAG TNLLQGFAAK VDRENKQRLN EFAKELRSFR SVDMSGCNFG DEGLFFLAES LGYNQTVEEV
201: SFSANGITAA GVKAFDGVLQ SNIMLKVLNL SGNPIGDEGA KSLCATLMEN SSVEVLQLNS TDLGDEGAKE IAELLKRNST LRVIELNNNM IDYSGFTSLA
301: GALPENNTIR NLHLNGNYGG ALGANALSKG LEGNKSLREL HLHGNSIGDE GIRALMAGLS SHKGKLALLD LGNNSITAKG AFYVAEYIKR SKCLVWLNLY
401: MNDIGDEGAE KVADALKQNR SIATIDIGGN NIHAEGVNAI AQALKDNAII TTLEVGYNPI GPDGAKALSE ILKFHGNVKT LKLGWCQIAA KGAEYVADML
501: RYNNTISVLD LRANGLRDEG ASCLARSLKV VNEALTSVDL GFNEIRDDGA FSIAQALKAN EDVTVTSINL GNNFITKFGQ SALTDARDHV LEMTEKEVEI
601: FF
001: MASSSTSSLN LHSLPKASSG LGQWKSGFRY ELLGSSVSRN RLFVSPVVIH HRSPRLPAIK AAYNSDGGSK RSRVYKESQA ASGFPNAKVQ QIASSVLPLG
101: SFAVVTFVLW KVVGKFMSPK SPKTSAGENN SSTQGVKWSI GAGTNLLQGF AAKVDREAKQ RLNEFAKELR SFRSVDMSGC NFGDEGLFFL AESLGYNQTV
201: EEVSFSANGI TAAGVKAFDG VLQSNIMLKI LNLSGNPIGD EGAKTLCATL MENSSIEILQ LNSTDIGDEG AKEIAELLKR NSTLRIIELN NNMIDYSGFT
301: SLAGALLENN TIRNLHLNGN YGGALGANAL AKGLEGNKSL RELHLHGNSI GDEGTRALMA GLSSHKGKVA LLDLGNNSIS AKGAFYVAEY IKRSKSLVWL
401: NLYMNDIGDE GAEKIADSLK QNRSIATIDL GGNNIHAEGV NAIAQALKDN AIITTLEVGY NPIGPDGAKA LSEILKFHGN VKTLKLGWCQ IAAKGAEHVA
501: DMLRYNNTIS VLDLRANGLR DEGASCLARS LKVVNEALTS VDLGFNEIRD DGAFAIAQAL KANEDVTVTS INLGNNFITK FGQSALTDAR DHVLEMTEKE
601: VEIFF
101: SFAVVTFVLW KVVGKFMSPK SPKTSAGENN SSTQGVKWSI GAGTNLLQGF AAKVDREAKQ RLNEFAKELR SFRSVDMSGC NFGDEGLFFL AESLGYNQTV
201: EEVSFSANGI TAAGVKAFDG VLQSNIMLKI LNLSGNPIGD EGAKTLCATL MENSSIEILQ LNSTDIGDEG AKEIAELLKR NSTLRIIELN NNMIDYSGFT
301: SLAGALLENN TIRNLHLNGN YGGALGANAL AKGLEGNKSL RELHLHGNSI GDEGTRALMA GLSSHKGKVA LLDLGNNSIS AKGAFYVAEY IKRSKSLVWL
401: NLYMNDIGDE GAEKIADSLK QNRSIATIDL GGNNIHAEGV NAIAQALKDN AIITTLEVGY NPIGPDGAKA LSEILKFHGN VKTLKLGWCQ IAAKGAEHVA
501: DMLRYNNTIS VLDLRANGLR DEGASCLARS LKVVNEALTS VDLGFNEIRD DGAFAIAQAL KANEDVTVTS INLGNNFITK FGQSALTDAR DHVLEMTEKE
601: VEIFF
Arabidopsis Description
emb2004RNI-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q93ZV8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.