Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G196000.1 | Wheat | plastid | 94.13 | 93.97 |
| TraesCS7A01G194400.1 | Wheat | plastid | 92.01 | 91.71 |
| HORVU7Hr1G039610.2 | Barley | cytosol, peroxisome, plastid | 88.91 | 86.1 |
| Os06t0237502-00 | Rice | plastid | 75.2 | 75.08 |
| Zm00001d044774_P004 | Maize | plastid | 69.98 | 66.1 |
| KXG19681 | Sorghum | plastid | 70.31 | 65.5 |
| VIT_01s0026g00610.t01 | Wine grape | mitochondrion | 53.34 | 65.4 |
| GSMUA_Achr9P28160_001 | Banana | plastid | 57.75 | 57.37 |
| CDY55048 | Canola | plastid | 52.85 | 54.27 |
| Bra019926.1-P | Field mustard | plastid | 52.69 | 54.1 |
| CDX93413 | Canola | plastid | 52.69 | 54.1 |
| AT1G10510.1 | Thale cress | plastid | 53.18 | 53.88 |
| CDY20626 | Canola | plastid | 52.04 | 53.43 |
| Bra018435.1-P | Field mustard | plastid | 52.04 | 53.34 |
| KRH69472 | Soybean | nucleus | 52.37 | 52.97 |
| PGSC0003DMT400040302 | Potato | plastid | 52.53 | 52.87 |
| Solyc05g006170.2.1 | Tomato | plastid | 52.2 | 52.46 |
| CDY20954 | Canola | plastid | 51.06 | 51.99 |
| KRH74682 | Soybean | plastid | 51.06 | 51.65 |
| TraesCS1B01G266900.1 | Wheat | plastid | 14.03 | 15.61 |
| TraesCS3B01G433100.1 | Wheat | cytosol, plastid | 14.03 | 15.52 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G100000.1 | EnsemblPlantsGene:TraesCS7B01G100000 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009941 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt |
| PFAM:PF13516 | SEG:seg | SMART:SM00368 | SUPFAM:SSF52047 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr7B:-:114181108..114193909
Molecular Weight (calculated)
65851.7 Da
IEP (calculated)
8.691
GRAVY (calculated)
-0.173
Length
613 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSLLLSSA RPLKPSLVAP SSFAHRRCAS SGPKPLSRRL PSLPPRARRW SVAPRAAPEA FEGIHSQDKP PGVGRGGARR RAYREEQGEP VSRPLGAGAG
101: GITRYIVPAG ALLALSFVIW KVVENFLPPK RKDQNSGEPT SSGVTWSFAA GSNLSTSTST KAQKESKKNL NKFYKELRTL KTVNMAGRQF GDEGLFFLAE
201: SLAYNKSAEE VDFSGNAITA AGIEAFDGIL QINTALKTLN LSGNIIGDEG AKCLSDILIE NVGIQKLFLN STNIGDEGAK AISDLLKKNK TIRIVQLSNN
301: TIEYSGFASI ADALLENNTL RSLYLNGNYG GPLGASSLAK GVVGNKSLRE LHLHGNGFGN EGLRVLMSAL SAHKGKITVL DIGNNNITSE GSLYVAEFIK
401: VTKSLRWLSL YMDDVGDEGA EKVADALKQN KTISTMDFGG NNIHSRGVTA IAETLKENEV LTTLELSYNP IGSEGVKALC DVLKFNGKLQ TLKLGWCQIG
501: VSGAEFIADC LKYNTTLSTL DLRANGLGDD GAICLARSLK IINESLKSLD LGFNEIRDDG AFALAQALKA NEDLAVTSLM LANNFFGKFG QVALTEARDH
601: VYEMSGKEID IYY
101: GITRYIVPAG ALLALSFVIW KVVENFLPPK RKDQNSGEPT SSGVTWSFAA GSNLSTSTST KAQKESKKNL NKFYKELRTL KTVNMAGRQF GDEGLFFLAE
201: SLAYNKSAEE VDFSGNAITA AGIEAFDGIL QINTALKTLN LSGNIIGDEG AKCLSDILIE NVGIQKLFLN STNIGDEGAK AISDLLKKNK TIRIVQLSNN
301: TIEYSGFASI ADALLENNTL RSLYLNGNYG GPLGASSLAK GVVGNKSLRE LHLHGNGFGN EGLRVLMSAL SAHKGKITVL DIGNNNITSE GSLYVAEFIK
401: VTKSLRWLSL YMDDVGDEGA EKVADALKQN KTISTMDFGG NNIHSRGVTA IAETLKENEV LTTLELSYNP IGSEGVKALC DVLKFNGKLQ TLKLGWCQIG
501: VSGAEFIADC LKYNTTLSTL DLRANGLGDD GAICLARSLK IINESLKSLD LGFNEIRDDG AFALAQALKA NEDLAVTSLM LANNFFGKFG QVALTEARDH
601: VYEMSGKEID IYY
001: MASSSTSSLN LHSLPKASSG LGQWKSGFRY ELLGSSVSRN RLFVSPVVIH HRSPRLPAIK AAYNSDGGSK RSRVYKESQA ASGFPNAKVQ QIASSVLPLG
101: SFAVVTFVLW KVVGKFMSPK SPKTSAGENN SSTQGVKWSI GAGTNLLQGF AAKVDREAKQ RLNEFAKELR SFRSVDMSGC NFGDEGLFFL AESLGYNQTV
201: EEVSFSANGI TAAGVKAFDG VLQSNIMLKI LNLSGNPIGD EGAKTLCATL MENSSIEILQ LNSTDIGDEG AKEIAELLKR NSTLRIIELN NNMIDYSGFT
301: SLAGALLENN TIRNLHLNGN YGGALGANAL AKGLEGNKSL RELHLHGNSI GDEGTRALMA GLSSHKGKVA LLDLGNNSIS AKGAFYVAEY IKRSKSLVWL
401: NLYMNDIGDE GAEKIADSLK QNRSIATIDL GGNNIHAEGV NAIAQALKDN AIITTLEVGY NPIGPDGAKA LSEILKFHGN VKTLKLGWCQ IAAKGAEHVA
501: DMLRYNNTIS VLDLRANGLR DEGASCLARS LKVVNEALTS VDLGFNEIRD DGAFAIAQAL KANEDVTVTS INLGNNFITK FGQSALTDAR DHVLEMTEKE
601: VEIFF
101: SFAVVTFVLW KVVGKFMSPK SPKTSAGENN SSTQGVKWSI GAGTNLLQGF AAKVDREAKQ RLNEFAKELR SFRSVDMSGC NFGDEGLFFL AESLGYNQTV
201: EEVSFSANGI TAAGVKAFDG VLQSNIMLKI LNLSGNPIGD EGAKTLCATL MENSSIEILQ LNSTDIGDEG AKEIAELLKR NSTLRIIELN NNMIDYSGFT
301: SLAGALLENN TIRNLHLNGN YGGALGANAL AKGLEGNKSL RELHLHGNSI GDEGTRALMA GLSSHKGKVA LLDLGNNSIS AKGAFYVAEY IKRSKSLVWL
401: NLYMNDIGDE GAEKIADSLK QNRSIATIDL GGNNIHAEGV NAIAQALKDN AIITTLEVGY NPIGPDGAKA LSEILKFHGN VKTLKLGWCQ IAAKGAEHVA
501: DMLRYNNTIS VLDLRANGLR DEGASCLARS LKVVNEALTS VDLGFNEIRD DGAFAIAQAL KANEDVTVTS INLGNNFITK FGQSALTDAR DHVLEMTEKE
601: VEIFF
Arabidopsis Description
emb2004RNI-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q93ZV8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.