Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G194400.1 | Wheat | plastid | 89.42 | 92.03 |
| TraesCS7D01G196000.1 | Wheat | plastid | 89.1 | 91.86 |
| TraesCS7B01G100000.1 | Wheat | plastid | 86.1 | 88.91 |
| Os06t0237502-00 | Rice | plastid | 74.57 | 76.87 |
| Zm00001d044774_P004 | Maize | plastid | 69.19 | 67.49 |
| VIT_01s0026g00610.t01 | Wine grape | mitochondrion | 52.45 | 66.4 |
| KXG19681 | Sorghum | plastid | 67.61 | 65.05 |
| GSMUA_Achr9P28160_001 | Banana | plastid | 54.98 | 56.4 |
| CDY20626 | Canola | plastid | 51.97 | 55.11 |
| AT1G10510.1 | Thale cress | plastid | 51.82 | 54.21 |
| Bra018435.1-P | Field mustard | plastid | 51.18 | 54.18 |
| PGSC0003DMT400040302 | Potato | plastid | 51.5 | 53.53 |
| Solyc05g006170.2.1 | Tomato | plastid | 51.18 | 53.11 |
| CDY55048 | Canola | plastid | 49.92 | 52.93 |
| CDX93413 | Canola | plastid | 49.76 | 52.76 |
| Bra019926.1-P | Field mustard | plastid | 49.76 | 52.76 |
| CDY20954 | Canola | plastid | 49.61 | 52.16 |
| KRH69472 | Soybean | nucleus | 49.92 | 52.15 |
| KRH74682 | Soybean | plastid | 49.13 | 51.32 |
| HORVU3Hr1G090080.1 | Barley | plastid | 14.06 | 16.07 |
| HORVU1Hr1G063300.3 | Barley | plastid | 14.69 | 14.24 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A287W507 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009941 | EnsemblPlantsGene:HORVU7Hr1G039610 | EnsemblPlants:HORVU7Hr1G039610.2 | InterPro:IPR001611 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PFAM:PF13516 | PANTHER:PTHR24114 | PANTHER:PTHR24114:SF30 | SMART:SM00368 |
| SUPFAM:SSF52047 | UniParc:UPI000B47EE71 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:104794017..104803577
Molecular Weight (calculated)
68079.3 Da
IEP (calculated)
8.060
GRAVY (calculated)
-0.206
Length
633 amino acids
Sequence
(BLAST)
(BLAST)
001: QPYPLCPRRE ESSLPSQNPV HISGGHHPHP MESSLLLSSA RPLKPSLVAP TFAHRRCSSF GPKPLPRRLP SLPPRAASEA FDGIHSQDKP PGVGRGGARR
101: RSYREEQGEP VARPLGAGAG GITRYIAPAG ALLALSFVIW KVVENFLPPK RKDQNSGEPM SSGVTWSFAA GSNLSTSTSI KAQKESKKNL NKFYKELRTL
201: KTVNMAGRQF GDEGLFFLAE SLAYNKSAEE VDFSGNAITA AGIEAFDGIL QINTALKTLN LSGNAIGDEG AKCLSDILIE NVGIQKLFLN STNIGDEGAK
301: AISDLLKKNK TIRIVQLSNN TIEYSGFASI ADALLENNTL RSLYLNGNYG GPLGASSLAK GVVGNKSLRE LHLHGNGFGN EGLRVLMSAL SAHKGKITVL
401: DIGNNNITSE GSLYVAEFIK VTKSLRWLSL YMDDVGDEGA EKVADALKQN KTISTMDFGG NNIHSRGVTA IAETLKENEV LTTLELSYNP IGPEGVKALC
501: DVLKFNGKLQ TLKLGWCQIG VSGAEFIADC LKYNTTLSTL DLRANGLGDD GAICLARSLK IINESLKSLD LGFNEIRDDG AFALAQALKA NEDLAVTSLM
601: LANNFFGKFG QVALTEARDH VYEMSGKEID IYY
101: RSYREEQGEP VARPLGAGAG GITRYIAPAG ALLALSFVIW KVVENFLPPK RKDQNSGEPM SSGVTWSFAA GSNLSTSTSI KAQKESKKNL NKFYKELRTL
201: KTVNMAGRQF GDEGLFFLAE SLAYNKSAEE VDFSGNAITA AGIEAFDGIL QINTALKTLN LSGNAIGDEG AKCLSDILIE NVGIQKLFLN STNIGDEGAK
301: AISDLLKKNK TIRIVQLSNN TIEYSGFASI ADALLENNTL RSLYLNGNYG GPLGASSLAK GVVGNKSLRE LHLHGNGFGN EGLRVLMSAL SAHKGKITVL
401: DIGNNNITSE GSLYVAEFIK VTKSLRWLSL YMDDVGDEGA EKVADALKQN KTISTMDFGG NNIHSRGVTA IAETLKENEV LTTLELSYNP IGPEGVKALC
501: DVLKFNGKLQ TLKLGWCQIG VSGAEFIADC LKYNTTLSTL DLRANGLGDD GAICLARSLK IINESLKSLD LGFNEIRDDG AFALAQALKA NEDLAVTSLM
601: LANNFFGKFG QVALTEARDH VYEMSGKEID IYY
001: MASSSTSSLN LHSLPKASSG LGQWKSGFRY ELLGSSVSRN RLFVSPVVIH HRSPRLPAIK AAYNSDGGSK RSRVYKESQA ASGFPNAKVQ QIASSVLPLG
101: SFAVVTFVLW KVVGKFMSPK SPKTSAGENN SSTQGVKWSI GAGTNLLQGF AAKVDREAKQ RLNEFAKELR SFRSVDMSGC NFGDEGLFFL AESLGYNQTV
201: EEVSFSANGI TAAGVKAFDG VLQSNIMLKI LNLSGNPIGD EGAKTLCATL MENSSIEILQ LNSTDIGDEG AKEIAELLKR NSTLRIIELN NNMIDYSGFT
301: SLAGALLENN TIRNLHLNGN YGGALGANAL AKGLEGNKSL RELHLHGNSI GDEGTRALMA GLSSHKGKVA LLDLGNNSIS AKGAFYVAEY IKRSKSLVWL
401: NLYMNDIGDE GAEKIADSLK QNRSIATIDL GGNNIHAEGV NAIAQALKDN AIITTLEVGY NPIGPDGAKA LSEILKFHGN VKTLKLGWCQ IAAKGAEHVA
501: DMLRYNNTIS VLDLRANGLR DEGASCLARS LKVVNEALTS VDLGFNEIRD DGAFAIAQAL KANEDVTVTS INLGNNFITK FGQSALTDAR DHVLEMTEKE
601: VEIFF
101: SFAVVTFVLW KVVGKFMSPK SPKTSAGENN SSTQGVKWSI GAGTNLLQGF AAKVDREAKQ RLNEFAKELR SFRSVDMSGC NFGDEGLFFL AESLGYNQTV
201: EEVSFSANGI TAAGVKAFDG VLQSNIMLKI LNLSGNPIGD EGAKTLCATL MENSSIEILQ LNSTDIGDEG AKEIAELLKR NSTLRIIELN NNMIDYSGFT
301: SLAGALLENN TIRNLHLNGN YGGALGANAL AKGLEGNKSL RELHLHGNSI GDEGTRALMA GLSSHKGKVA LLDLGNNSIS AKGAFYVAEY IKRSKSLVWL
401: NLYMNDIGDE GAEKIADSLK QNRSIATIDL GGNNIHAEGV NAIAQALKDN AIITTLEVGY NPIGPDGAKA LSEILKFHGN VKTLKLGWCQ IAAKGAEHVA
501: DMLRYNNTIS VLDLRANGLR DEGASCLARS LKVVNEALTS VDLGFNEIRD DGAFAIAQAL KANEDVTVTS INLGNNFITK FGQSALTDAR DHVLEMTEKE
601: VEIFF
Arabidopsis Description
emb2004RNI-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q93ZV8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.