CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044774_P004	Maize	plastid	77.81	78.89
Os06t0237502-00	Rice	plastid	68.24	73.13
TraesCS7B01G100000.1	Wheat	plastid	65.5	70.31
TraesCS7A01G194400.1	Wheat	plastid	64.59	69.11
TraesCS7D01G196000.1	Wheat	plastid	64.29	68.89
HORVU7Hr1G039610.2	Barley	cytosol, peroxisome, plastid	65.05	67.61
VIT_01s0026g00610.t01	Wine grape	mitochondrion	48.63	64.0
GSMUA_Achr9P28160_001	Banana	plastid	55.93	59.64
KRH69472	Soybean	nucleus	50.46	54.79
KRH74682	Soybean	plastid	50.15	54.46
CDY55048	Canola	plastid	48.94	53.94
CDX93413	Canola	plastid	48.78	53.77
Bra019926.1-P	Field mustard	plastid	48.78	53.77
Solyc05g006170.2.1	Tomato	plastid	48.18	51.97
CDY20626	Canola	plastid	46.96	51.76
PGSC0003DMT400040302	Potato	plastid	47.72	51.56
Bra018435.1-P	Field mustard	plastid	46.81	51.51
AT1G10510.1	Thale cress	plastid	47.26	51.41
CDY20954	Canola	plastid	46.05	50.33
EES07543	Sorghum	cytosol	7.29	19.12
EES05430	Sorghum	cytosol, nucleus, plastid	15.05	18.23
EES05435	Sorghum	cytosol, plastid	15.2	17.92

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A194YJ98	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0009507
GO:GO:0009536	GO:GO:0009941	InterPro:IPR001611	InterPro:IPR032675	EnsemblPlants:KXG19681	ProteinID:KXG19681
ProteinID:KXG19681.1	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF13516	PANTHER:PTHR24106	PANTHER:PTHR24106:SF127
SMART:SM00368	EnsemblPlantsGene:SORBI_3010G098200	SUPFAM:SSF52047	UniParc:UPI0007F2B08D	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:8875176..8881925

Molecular Weight (calculated)

70592.7 Da

IEP (calculated)

9.234

GRAVY (calculated)

-0.205

Length

658 amino acids

Sequence
(BLAST)

001: MIHTTLPLPA SKAPPPKAPA RRPPPVSLPH PPPSSSSGPQ PPRPMESSLL LSSPRPLKPF HPLRFHTGRR RHASFRGKPS PPPLPPLAHG SRRVGLAVPR
101: AASVSFGDGF RIQDRPPGTG RGGAPRRSYR EAQGEAAVPP LAAAARKVAP YAVPVGAVLM LSFVIWKVVQ NMIPGKKKDQ NSGESAPSGI MWSFAAGSNL
201: STPTLSAEKE SRKNLNKFYK EIRTSKTVNM AGRQFGDEGL FFLAESLAYN KSAEEVDFSG NGITAVGIEA FDGILQINTT LKTLNLSGND IGDEGAKCLS
301: DILVENFGIQ KLLLNSINIG DEGAKAISNM LKKNKSIRFL QLSNNTIDYS GFASIAEGLL ENNLIRSLYL NGNYGGPLGA SSLAQGILGN KSLREIHLHG
401: NGIGNEGIRE LMSALSAHKG KITIVDIGNN NISPEGLRPV ASFLKRTKSL QWFSLCMNDI SDEGAEKVAE ALKDNKTIST IDLGGNNIHS KGVSVIAETL
501: KDNAVLTTLD LSYNPIGSDG VKALCDVLKF HGKIQTLKLG WCQIGVEGAE CIADCLKYNT TLSTLDLRAN GLGDDGAICL ARSFKIINES LTSLDLGFNE
601: IRDDGAFALA QALKANEDLA VTSLNLANNF FTKFGQVALS EARDHVFEMH EKEIDIYF

Best Arabidopsis Sequence Match ( AT1G10510.1 )
(BLAST)

001: MASSSTSSLN LHSLPKASSG LGQWKSGFRY ELLGSSVSRN RLFVSPVVIH HRSPRLPAIK AAYNSDGGSK RSRVYKESQA ASGFPNAKVQ QIASSVLPLG
101: SFAVVTFVLW KVVGKFMSPK SPKTSAGENN SSTQGVKWSI GAGTNLLQGF AAKVDREAKQ RLNEFAKELR SFRSVDMSGC NFGDEGLFFL AESLGYNQTV
201: EEVSFSANGI TAAGVKAFDG VLQSNIMLKI LNLSGNPIGD EGAKTLCATL MENSSIEILQ LNSTDIGDEG AKEIAELLKR NSTLRIIELN NNMIDYSGFT
301: SLAGALLENN TIRNLHLNGN YGGALGANAL AKGLEGNKSL RELHLHGNSI GDEGTRALMA GLSSHKGKVA LLDLGNNSIS AKGAFYVAEY IKRSKSLVWL
401: NLYMNDIGDE GAEKIADSLK QNRSIATIDL GGNNIHAEGV NAIAQALKDN AIITTLEVGY NPIGPDGAKA LSEILKFHGN VKTLKLGWCQ IAAKGAEHVA
501: DMLRYNNTIS VLDLRANGLR DEGASCLARS LKVVNEALTS VDLGFNEIRD DGAFAIAQAL KANEDVTVTS INLGNNFITK FGQSALTDAR DHVLEMTEKE
601: VEIFF

Arabidopsis Description

emb2004RNI-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q93ZV8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.