Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018435.1-P | Field mustard | plastid | 90.28 | 90.13 |
| CDY55048 | Canola | plastid | 83.42 | 83.42 |
| CDX93413 | Canola | plastid | 83.25 | 83.25 |
| AT1G10510.1 | Thale cress | plastid | 84.25 | 83.14 |
| CDY20954 | Canola | plastid | 81.74 | 81.06 |
| VIT_01s0026g00610.t01 | Wine grape | mitochondrion | 64.99 | 77.6 |
| PGSC0003DMT400040302 | Potato | plastid | 64.15 | 62.89 |
| Solyc05g006170.2.1 | Tomato | plastid | 64.15 | 62.79 |
| KRH69472 | Soybean | nucleus | 63.15 | 62.21 |
| KRH74682 | Soybean | plastid | 61.81 | 60.89 |
| GSMUA_Achr9P28160_001 | Banana | plastid | 60.47 | 58.51 |
| TraesCS7D01G196000.1 | Wheat | plastid | 55.28 | 53.75 |
| Os06t0237502-00 | Rice | plastid | 54.94 | 53.42 |
| TraesCS7A01G194400.1 | Wheat | plastid | 54.27 | 52.68 |
| TraesCS7B01G100000.1 | Wheat | plastid | 53.43 | 52.04 |
| HORVU7Hr1G039610.2 | Barley | cytosol, peroxisome, plastid | 55.11 | 51.97 |
| Zm00001d044774_P004 | Maize | plastid | 52.43 | 48.23 |
| KXG19681 | Sorghum | plastid | 51.76 | 46.96 |
| CDY16082 | Canola | cytosol | 5.03 | 26.55 |
| CDY02566 | Canola | cytosol | 7.54 | 22.73 |
| CDX93931 | Canola | cytosol | 12.06 | 21.3 |
| CDY44911 | Canola | cytosol | 8.54 | 20.32 |
| CDX92540 | Canola | cytosol | 17.59 | 18.75 |
| CDY56462 | Canola | cytosol, plastid | 16.75 | 18.69 |
| CDX89174 | Canola | plastid | 15.58 | 17.25 |
| CDX76683 | Canola | mitochondrion | 16.42 | 16.61 |
| CDY27720 | Canola | cytosol, mitochondrion | 6.37 | 15.64 |
| CDY05221 | Canola | cytosol, mitochondrion, nucleus, plastid | 4.19 | 13.09 |
| CDX93932 | Canola | cytosol | 2.01 | 10.43 |
Protein Annotations
| EnsemblPlants:CDY20626 | EnsemblPlantsGene:GSBRNA2T00012804001 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PFAM:PF13516 | ProteinID:CDY20626 |
| ProteinID:CDY20626.1 | SEG:seg | SMART:SM00368 | SUPFAM:SSF52047 | UniParc:UPI0004EF02AC | UniProt:A0A078G5A5 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC08g14320DBnaC08g14320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G5A5]
Coordinates
chrLK032110:-:313348..316791
Molecular Weight (calculated)
64038.3 Da
IEP (calculated)
7.563
GRAVY (calculated)
-0.103
Length
597 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSTSSLY LHSLPKASSG LRFKFRGVSA SSSHRLFLSP VVFLRQSPRL SAIRASAEGS SRRKAYKESQ AVSGFPNAEV QQIASNVLPV GSFVVVTFVL
101: WKVVEKFMSP KSPKTSSSGD SKSSPQGVKW SIGAGTNLLQ GFAAKVDREN KQRLNEFAKE LRSFRSVDMS GCNFGDEGLF FLAESLGYNQ TVEEVSFSAN
201: GITAAGVKAF DGVLQSNIVL KVLNLSGNPI GDEGAKTLCA TLMENSSIEI LQLNSTDLGD EGAKEIAELL KRNSTLRVIE LNNNMIDYSG FTSLAGALLE
301: NNTIRNLHLN GNYGGALGAN ALSKGLEGNK SLRELHLHGN SIGDEGIRAL MAGLSSHKGK LALLDLGNNS ITAKGAFYVA EYIKRSKCLV WLNLYMNDIG
401: DEGAEKVADA LKQNRSIATI DIGGNNIRAE GVNAIAQALK DNAIITTLEV GYNPIGPDGA KALSEILKFH GNVKTLKLGW CQIAAKGAEY VADMLRYNNT
501: ISVLDLRANG LRDEGASCLA RSLKVVNEAL TSVDLGFNEI RDDGAFAIAQ ALKANEDVTV TSINLGNNFI TKFGQSALTD ARDHVLEMTE KEVEIFF
101: WKVVEKFMSP KSPKTSSSGD SKSSPQGVKW SIGAGTNLLQ GFAAKVDREN KQRLNEFAKE LRSFRSVDMS GCNFGDEGLF FLAESLGYNQ TVEEVSFSAN
201: GITAAGVKAF DGVLQSNIVL KVLNLSGNPI GDEGAKTLCA TLMENSSIEI LQLNSTDLGD EGAKEIAELL KRNSTLRVIE LNNNMIDYSG FTSLAGALLE
301: NNTIRNLHLN GNYGGALGAN ALSKGLEGNK SLRELHLHGN SIGDEGIRAL MAGLSSHKGK LALLDLGNNS ITAKGAFYVA EYIKRSKCLV WLNLYMNDIG
401: DEGAEKVADA LKQNRSIATI DIGGNNIRAE GVNAIAQALK DNAIITTLEV GYNPIGPDGA KALSEILKFH GNVKTLKLGW CQIAAKGAEY VADMLRYNNT
501: ISVLDLRANG LRDEGASCLA RSLKVVNEAL TSVDLGFNEI RDDGAFAIAQ ALKANEDVTV TSINLGNNFI TKFGQSALTD ARDHVLEMTE KEVEIFF
001: MASSSTSSLN LHSLPKASSG LGQWKSGFRY ELLGSSVSRN RLFVSPVVIH HRSPRLPAIK AAYNSDGGSK RSRVYKESQA ASGFPNAKVQ QIASSVLPLG
101: SFAVVTFVLW KVVGKFMSPK SPKTSAGENN SSTQGVKWSI GAGTNLLQGF AAKVDREAKQ RLNEFAKELR SFRSVDMSGC NFGDEGLFFL AESLGYNQTV
201: EEVSFSANGI TAAGVKAFDG VLQSNIMLKI LNLSGNPIGD EGAKTLCATL MENSSIEILQ LNSTDIGDEG AKEIAELLKR NSTLRIIELN NNMIDYSGFT
301: SLAGALLENN TIRNLHLNGN YGGALGANAL AKGLEGNKSL RELHLHGNSI GDEGTRALMA GLSSHKGKVA LLDLGNNSIS AKGAFYVAEY IKRSKSLVWL
401: NLYMNDIGDE GAEKIADSLK QNRSIATIDL GGNNIHAEGV NAIAQALKDN AIITTLEVGY NPIGPDGAKA LSEILKFHGN VKTLKLGWCQ IAAKGAEHVA
501: DMLRYNNTIS VLDLRANGLR DEGASCLARS LKVVNEALTS VDLGFNEIRD DGAFAIAQAL KANEDVTVTS INLGNNFITK FGQSALTDAR DHVLEMTEKE
601: VEIFF
101: SFAVVTFVLW KVVGKFMSPK SPKTSAGENN SSTQGVKWSI GAGTNLLQGF AAKVDREAKQ RLNEFAKELR SFRSVDMSGC NFGDEGLFFL AESLGYNQTV
201: EEVSFSANGI TAAGVKAFDG VLQSNIMLKI LNLSGNPIGD EGAKTLCATL MENSSIEILQ LNSTDIGDEG AKEIAELLKR NSTLRIIELN NNMIDYSGFT
301: SLAGALLENN TIRNLHLNGN YGGALGANAL AKGLEGNKSL RELHLHGNSI GDEGTRALMA GLSSHKGKVA LLDLGNNSIS AKGAFYVAEY IKRSKSLVWL
401: NLYMNDIGDE GAEKIADSLK QNRSIATIDL GGNNIHAEGV NAIAQALKDN AIITTLEVGY NPIGPDGAKA LSEILKFHGN VKTLKLGWCQ IAAKGAEHVA
501: DMLRYNNTIS VLDLRANGLR DEGASCLARS LKVVNEALTS VDLGFNEIRD DGAFAIAQAL KANEDVTVTS INLGNNFITK FGQSALTDAR DHVLEMTEKE
601: VEIFF
Arabidopsis Description
emb2004RNI-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q93ZV8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.