Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020034.1-P | Field mustard | cytosol | 86.85 | 88.62 |
| CDX92540 | Canola | cytosol | 50.2 | 22.5 |
| CDY02566 | Canola | cytosol | 17.53 | 22.22 |
| KRH71426 | Soybean | nucleus | 45.82 | 21.58 |
| KRH32020 | Soybean | cytosol | 45.02 | 21.16 |
| CDX93931 | Canola | cytosol | 28.29 | 21.01 |
| Zm00001d051112_P001 | Maize | plasma membrane | 41.83 | 20.35 |
| Zm00001d017239_P001 | Maize | mitochondrion, plasma membrane | 42.23 | 20.27 |
| VIT_07s0104g00520.t01 | Wine grape | plastid | 43.43 | 20.15 |
| TraesCS3D01G394300.1 | Wheat | cytosol, plastid | 44.22 | 20.04 |
| HORVU3Hr1G090080.1 | Barley | plastid | 44.22 | 20.04 |
| TraesCS1B01G266900.1 | Wheat | plastid | 43.82 | 19.96 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 43.43 | 19.89 |
| TraesCS3B01G433100.1 | Wheat | cytosol, plastid | 43.82 | 19.86 |
| TraesCS1D01G255600.1 | Wheat | cytosol, plastid | 43.82 | 19.82 |
| TraesCS1A01G256200.1 | Wheat | cytosol | 43.43 | 19.82 |
| Os05t0543200-01 | Rice | plasma membrane | 42.63 | 19.67 |
| EES05430 | Sorghum | cytosol, nucleus, plastid | 42.23 | 19.52 |
| PGSC0003DMT400086322 | Potato | cytosol | 41.43 | 19.48 |
| EES05435 | Sorghum | cytosol, plastid | 42.63 | 19.18 |
| Solyc09g065190.1.1 | Tomato | plastid | 40.64 | 19.1 |
| TraesCS3A01G400100.1 | Wheat | plastid | 44.62 | 19.02 |
| CDY56462 | Canola | cytosol, plastid | 40.24 | 18.88 |
| CDX89174 | Canola | plastid | 39.04 | 18.18 |
| Zm00001d034691_P001 | Maize | cytosol | 27.09 | 17.89 |
| Zm00001d043604_P002 | Maize | cytosol | 37.45 | 17.5 |
| CDX76683 | Canola | mitochondrion | 40.24 | 17.12 |
| HORVU1Hr1G063300.3 | Barley | plastid | 43.03 | 16.54 |
| Zm00001d046105_P001 | Maize | peroxisome | 37.45 | 15.99 |
| EES07543 | Sorghum | cytosol | 14.34 | 14.34 |
| GSMUA_Achr8P13660_001 | Banana | cytosol | 32.27 | 13.24 |
| Zm00001d052426_P001 | Maize | cytosol | 6.37 | 11.68 |
| Os05t0409200-00 | Rice | cytosol | 4.38 | 10.28 |
| CDY16082 | Canola | cytosol | 4.38 | 9.73 |
| CDY20954 | Canola | plastid | 21.91 | 9.14 |
| CDY27720 | Canola | cytosol, mitochondrion | 8.76 | 9.05 |
| CDY55048 | Canola | plastid | 20.72 | 8.71 |
| CDX93413 | Canola | plastid | 20.72 | 8.71 |
| CDX93932 | Canola | cytosol | 3.98 | 8.7 |
| CDY20626 | Canola | plastid | 20.32 | 8.54 |
| CDY05221 | Canola | cytosol, mitochondrion, nucleus, plastid | 5.18 | 6.81 |
Protein Annotations
| EnsemblPlants:CDY44911 | EnsemblPlantsGene:GSBRNA2T00081067001 | Gene3D:3.80.10.10 | GO:A0A078I4V3 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR24106 | PANTHER:PTHR24106:SF248 | ProteinID:CDY44911 |
| ProteinID:CDY44911.1 | SEG:seg | SUPFAM:SSF52047 | TMHMM:TMhelix | UniParc:UPI0004EEB210 | UniProt:A0A078I4V3 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA02g04160DBnaA02g04160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I4V3]
Coordinates
chrLK032606:-:9598..13089
Molecular Weight (calculated)
28454.9 Da
IEP (calculated)
4.370
GRAVY (calculated)
-0.208
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRSNFSLIC SFEEYLGRFP THPMVILKLN SPYPQCSDDE AQKFSLICFS NRSFGLGGAR VAEPILASLK HQLKVEALDV MNLFSNALQG NVLSSLNLSD
101: NASGEKGVRA FGTLLKSLSS LEELYLMNDG ISKEAAQAVS ELIPSTEKLR VLHFHNYSPF KLLNIDGNII SEEGVEEVRE IFKKKPELLG DLDENDPDEE
201: DEEDYELESK LKNLEVNEDD YVFVMFVLFS VLFVLLYQDY LNVLTKNKQK Y
101: NASGEKGVRA FGTLLKSLSS LEELYLMNDG ISKEAAQAVS ELIPSTEKLR VLHFHNYSPF KLLNIDGNII SEEGVEEVRE IFKKKPELLG DLDENDPDEE
201: DEEDYELESK LKNLEVNEDD YVFVMFVLFS VLFVLLYQDY LNVLTKNKQK Y
001: MADILDSRPH AFSIKLWPPS LPTRKALIER ITNNFSSKTI FTEKYGSLTK DQATENAKRI EDIAFSTANQ QFEREPDGDG GSAVQLYAKE CSKLILEVLK
101: KGPVAKVAAR ELISEDSVSP RETFFDISKG KRAFIEAEEA EELLKPLKEP GNAYTKICFS NRSFGLGAAR VAEPILASLK DQLKEVDLSD FVAGRPELEA
201: LEVMNIFSDA LQGSILSSLN LSDNALGEKG VRAFGALLKS LSSLEELYLM NDGISKEAAQ AVSELIPSTE NLRVLHFHNN MTGDEGALAI AEVVKRSPLL
301: ENFRCSSTRV GSKGGIALSE ALEHCTHMEK LDLRDNMFGT EAGVSLSKTL SSFKHMTELY LSYLNLEDEG AIAIVNALKE SASPIEVLEM AGNDITVEAA
401: SAIAACVAAK QDLNKLNLSE NELKDEGCVQ IANCIEEGHS KLQYIDMSTN YIRRAGARAL AHVVVKKEAF KLLNIDGNII SEEGIEELKE IFKKSPELLG
501: ALDENDPDGE EDDDDEEDEE DEENEGNGNG ELESKLKNLE VNQED
101: KGPVAKVAAR ELISEDSVSP RETFFDISKG KRAFIEAEEA EELLKPLKEP GNAYTKICFS NRSFGLGAAR VAEPILASLK DQLKEVDLSD FVAGRPELEA
201: LEVMNIFSDA LQGSILSSLN LSDNALGEKG VRAFGALLKS LSSLEELYLM NDGISKEAAQ AVSELIPSTE NLRVLHFHNN MTGDEGALAI AEVVKRSPLL
301: ENFRCSSTRV GSKGGIALSE ALEHCTHMEK LDLRDNMFGT EAGVSLSKTL SSFKHMTELY LSYLNLEDEG AIAIVNALKE SASPIEVLEM AGNDITVEAA
401: SAIAACVAAK QDLNKLNLSE NELKDEGCVQ IANCIEEGHS KLQYIDMSTN YIRRAGARAL AHVVVKKEAF KLLNIDGNII SEEGIEELKE IFKKSPELLG
501: ALDENDPDGE EDDDDEEDEE DEENEGNGNG ELESKLKNLE VNQED
Arabidopsis Description
RANGAP2RANGAP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UQD1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.