Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 1
  • plastid 2
  • mitochondrion 2
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007730.1-P Field mustard cytosol, plastid 99.25 99.25
Bra013834.1-P Field mustard cytosol 21.87 88.64
CDX93931 Canola cytosol 55.33 87.57
CDX76683 Canola mitochondrion 94.39 85.59
CDX89174 Canola plastid 82.8 82.19
CDX93932 Canola cytosol 14.39 66.96
Os05t0543200-01 Rice plasma membrane 61.87 60.85
GSMUA_Achr11P... Banana cytosol, plastid 62.06 60.58
Zm00001d051112_P001 Maize plasma membrane 58.13 60.27
Zm00001d017239_P001 Maize mitochondrion, plasma membrane 58.5 59.85
EES05430 Sorghum cytosol, nucleus, plastid 60.56 59.67
TraesCS1B01G266900.1 Wheat plastid 61.31 59.53
TraesCS1A01G256200.1 Wheat cytosol 60.75 59.09
TraesCS1D01G255600.1 Wheat cytosol, plastid 61.12 58.92
CDY02566 Canola cytosol 21.5 58.08
TraesCS3B01G433100.1 Wheat cytosol, plastid 59.81 57.76
EES05435 Sorghum cytosol, plastid 60.19 57.71
TraesCS3D01G394300.1 Wheat cytosol, plastid 59.63 57.58
CDX92540 Canola cytosol 60.19 57.5
EES07543 Sorghum cytosol 26.92 57.37
HORVU3Hr1G090080.1 Barley plastid 59.25 57.22
CDY16082 Canola cytosol 11.78 55.75
TraesCS3A01G400100.1 Wheat plastid 59.81 54.33
Zm00001d052426_P001 Maize cytosol 13.46 52.55
HORVU1Hr1G063300.3 Barley plastid 60.0 49.16
Zm00001d034691_P001 Maize cytosol 33.08 46.58
GSMUA_Achr8P13660_001 Banana cytosol 48.22 42.16
CDY44911 Canola cytosol 18.88 40.24
Os05t0409200-00 Rice cytosol 7.66 38.32
CDY05221 Canola cytosol, mitochondrion, nucleus, plastid 11.59 32.46
CDY27720 Canola cytosol, mitochondrion 14.21 31.28
Zm00001d043604_P002 Maize cytosol 29.16 29.05
Zm00001d046105_P001 Maize peroxisome 29.72 27.04
CDY20626 Canola plastid 18.69 16.75
CDX93413 Canola plastid 18.69 16.75
CDY55048 Canola plastid 18.5 16.58
CDY20954 Canola plastid 18.5 16.45
Protein Annotations
Gene3D:1.10.246.200MapMan:23.5.1.5Gene3D:3.80.10.10UniProt:A0A078J0B6EnsemblPlants:CDY56462ProteinID:CDY56462
ProteinID:CDY56462.1ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00019611001
InterPro:IPR001611InterPro:IPR032675InterPro:IPR038214InterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF13516
PFAM:PF13943PANTHER:PTHR24106PANTHER:PTHR24106:SF248SMART:SM00368SUPFAM:SSF52047UniParc:UPI0004EEB898
InterPro:WPP_domInterPro:WPP_sfSEG:seg:::
Description
BnaA09g55770DBnaA09g55770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0B6]
Coordinates
chrLK033491:-:52608..54409
Molecular Weight (calculated)
58295.7 Da
IEP (calculated)
4.278
GRAVY (calculated)
-0.348
Length
535 amino acids
Sequence
(BLAST)
001: MDHSVKTPPV LSVKMWPPSK STRLMLVDRM TKNITTPSIF SRKYGLLSLQ EAEEDAKRIE ELAFATANKH FQSEPDADGT SAVHVYAKES SKLMLEVIKR
101: GPQQVDSEAE GNVDGDTLFD LSGGRRAFID LEEARELLRP LAEPNNSFTK IRFSNRSFGS EAAKFAVGVL SSVKDQLTEV DLSDFVAGRP EAEALEVMTM
201: FSSALEGSNL RSLNLSDNAL GEKGIRAFAS LIKSQRGLEE LYLMNDGISE DAARAVRELL PSTGEIRVLQ FHNNMTGDEG AIAIAEIVKQ CPSLEDFRCS
301: STRIGSDGGV ALAEALASCS RLKKLDLRDN MFGVEGGVAL AKTLSVLSEL TEIYMSYLNL EDEGAEALSE ALVKSAPRLE VIELAGNDVT VKAAGKLAEC
401: IASKESLSKL NLSENELKDE GTILIAKALE EGHDQLTEVD LSTNMMRRAG ARALAQSVLK KPTLKLLNIN GNFISEEGVD EVSDMFKDSA DKLGPLDDND
501: PEGEDFEDED EEEEGEEDSE LEAKLGGLKI KQEEE
Best Arabidopsis Sequence Match ( AT3G63130.2 )
(BLAST)
001: MDHSAKTTQN RVLSVKMWPP SKSTRLMLVE RMTKNITTPS IFSRKYGLLS VEEAEQDAKR IEDLAFATAN KHFQNEPDGD GTSAVHVYAK ESSKLMLDVI
101: KRGPQEESEV EVSKDGDVFF DISGGSRAFI EEEEARDLLR PLADPRNSYT KIRFSNRSFG SEAAKFAASV LSSIKDQLTE VDLSDFVAGR PEAEALEVMN
201: MFSSALEGSK LRYLNLSDNA LGEKGIRAFA SLINSQHDLE ELYLMNDGIS EDAARAVREL LPSTDKIRVL QFHNNMTGDE GATAIAEIVR ECPSLEDFRC
301: SSTRIGSEGG VALAEALEHC SHLKKLDLRD NMFGVEGGIA LAKTLSVLTH LTEIYMSYLN LEDEGTEALS EALLKSAPSL EVLELAGNDI TVKSTGNLAA
401: CIASKQSLAK LNLSENELKD EGTILIAKAV EGHDQLVEVD LSTNMIRRAG ARALAQTVVK KNTFKLLNIN GNFISEEGID EVNDMFKDCL DKLVPLDDND
501: PEGEDFEDED EEEEGEDGNE LESKLGSLKI KQGEE
Arabidopsis Description
RANGAP1RAN GTPase-activating protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE82]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.