Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- mitochondrion 2
- cytosol 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra007730.1-P | Field mustard | cytosol, plastid | 99.25 | 99.25 |
Bra013834.1-P | Field mustard | cytosol | 21.87 | 88.64 |
CDX93931 | Canola | cytosol | 55.33 | 87.57 |
CDX76683 | Canola | mitochondrion | 94.39 | 85.59 |
CDX89174 | Canola | plastid | 82.8 | 82.19 |
CDX93932 | Canola | cytosol | 14.39 | 66.96 |
Os05t0543200-01 | Rice | plasma membrane | 61.87 | 60.85 |
GSMUA_Achr11P... | Banana | cytosol, plastid | 62.06 | 60.58 |
Zm00001d051112_P001 | Maize | plasma membrane | 58.13 | 60.27 |
Zm00001d017239_P001 | Maize | mitochondrion, plasma membrane | 58.5 | 59.85 |
EES05430 | Sorghum | cytosol, nucleus, plastid | 60.56 | 59.67 |
TraesCS1B01G266900.1 | Wheat | plastid | 61.31 | 59.53 |
TraesCS1A01G256200.1 | Wheat | cytosol | 60.75 | 59.09 |
TraesCS1D01G255600.1 | Wheat | cytosol, plastid | 61.12 | 58.92 |
CDY02566 | Canola | cytosol | 21.5 | 58.08 |
TraesCS3B01G433100.1 | Wheat | cytosol, plastid | 59.81 | 57.76 |
EES05435 | Sorghum | cytosol, plastid | 60.19 | 57.71 |
TraesCS3D01G394300.1 | Wheat | cytosol, plastid | 59.63 | 57.58 |
CDX92540 | Canola | cytosol | 60.19 | 57.5 |
EES07543 | Sorghum | cytosol | 26.92 | 57.37 |
HORVU3Hr1G090080.1 | Barley | plastid | 59.25 | 57.22 |
CDY16082 | Canola | cytosol | 11.78 | 55.75 |
TraesCS3A01G400100.1 | Wheat | plastid | 59.81 | 54.33 |
Zm00001d052426_P001 | Maize | cytosol | 13.46 | 52.55 |
HORVU1Hr1G063300.3 | Barley | plastid | 60.0 | 49.16 |
Zm00001d034691_P001 | Maize | cytosol | 33.08 | 46.58 |
GSMUA_Achr8P13660_001 | Banana | cytosol | 48.22 | 42.16 |
CDY44911 | Canola | cytosol | 18.88 | 40.24 |
Os05t0409200-00 | Rice | cytosol | 7.66 | 38.32 |
CDY05221 | Canola | cytosol, mitochondrion, nucleus, plastid | 11.59 | 32.46 |
CDY27720 | Canola | cytosol, mitochondrion | 14.21 | 31.28 |
Zm00001d043604_P002 | Maize | cytosol | 29.16 | 29.05 |
Zm00001d046105_P001 | Maize | peroxisome | 29.72 | 27.04 |
CDY20626 | Canola | plastid | 18.69 | 16.75 |
CDX93413 | Canola | plastid | 18.69 | 16.75 |
CDY55048 | Canola | plastid | 18.5 | 16.58 |
CDY20954 | Canola | plastid | 18.5 | 16.45 |
Protein Annotations
Gene3D:1.10.246.200 | MapMan:23.5.1.5 | Gene3D:3.80.10.10 | UniProt:A0A078J0B6 | EnsemblPlants:CDY56462 | ProteinID:CDY56462 |
ProteinID:CDY56462.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00019611001 |
InterPro:IPR001611 | InterPro:IPR032675 | InterPro:IPR038214 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PFAM:PF13516 |
PFAM:PF13943 | PANTHER:PTHR24106 | PANTHER:PTHR24106:SF248 | SMART:SM00368 | SUPFAM:SSF52047 | UniParc:UPI0004EEB898 |
InterPro:WPP_dom | InterPro:WPP_sf | SEG:seg | : | : | : |
Description
BnaA09g55770DBnaA09g55770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0B6]
Coordinates
chrLK033491:-:52608..54409
Molecular Weight (calculated)
58295.7 Da
IEP (calculated)
4.278
GRAVY (calculated)
-0.348
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHSVKTPPV LSVKMWPPSK STRLMLVDRM TKNITTPSIF SRKYGLLSLQ EAEEDAKRIE ELAFATANKH FQSEPDADGT SAVHVYAKES SKLMLEVIKR
101: GPQQVDSEAE GNVDGDTLFD LSGGRRAFID LEEARELLRP LAEPNNSFTK IRFSNRSFGS EAAKFAVGVL SSVKDQLTEV DLSDFVAGRP EAEALEVMTM
201: FSSALEGSNL RSLNLSDNAL GEKGIRAFAS LIKSQRGLEE LYLMNDGISE DAARAVRELL PSTGEIRVLQ FHNNMTGDEG AIAIAEIVKQ CPSLEDFRCS
301: STRIGSDGGV ALAEALASCS RLKKLDLRDN MFGVEGGVAL AKTLSVLSEL TEIYMSYLNL EDEGAEALSE ALVKSAPRLE VIELAGNDVT VKAAGKLAEC
401: IASKESLSKL NLSENELKDE GTILIAKALE EGHDQLTEVD LSTNMMRRAG ARALAQSVLK KPTLKLLNIN GNFISEEGVD EVSDMFKDSA DKLGPLDDND
501: PEGEDFEDED EEEEGEEDSE LEAKLGGLKI KQEEE
101: GPQQVDSEAE GNVDGDTLFD LSGGRRAFID LEEARELLRP LAEPNNSFTK IRFSNRSFGS EAAKFAVGVL SSVKDQLTEV DLSDFVAGRP EAEALEVMTM
201: FSSALEGSNL RSLNLSDNAL GEKGIRAFAS LIKSQRGLEE LYLMNDGISE DAARAVRELL PSTGEIRVLQ FHNNMTGDEG AIAIAEIVKQ CPSLEDFRCS
301: STRIGSDGGV ALAEALASCS RLKKLDLRDN MFGVEGGVAL AKTLSVLSEL TEIYMSYLNL EDEGAEALSE ALVKSAPRLE VIELAGNDVT VKAAGKLAEC
401: IASKESLSKL NLSENELKDE GTILIAKALE EGHDQLTEVD LSTNMMRRAG ARALAQSVLK KPTLKLLNIN GNFISEEGVD EVSDMFKDSA DKLGPLDDND
501: PEGEDFEDED EEEEGEEDSE LEAKLGGLKI KQEEE
001: MDHSAKTTQN RVLSVKMWPP SKSTRLMLVE RMTKNITTPS IFSRKYGLLS VEEAEQDAKR IEDLAFATAN KHFQNEPDGD GTSAVHVYAK ESSKLMLDVI
101: KRGPQEESEV EVSKDGDVFF DISGGSRAFI EEEEARDLLR PLADPRNSYT KIRFSNRSFG SEAAKFAASV LSSIKDQLTE VDLSDFVAGR PEAEALEVMN
201: MFSSALEGSK LRYLNLSDNA LGEKGIRAFA SLINSQHDLE ELYLMNDGIS EDAARAVREL LPSTDKIRVL QFHNNMTGDE GATAIAEIVR ECPSLEDFRC
301: SSTRIGSEGG VALAEALEHC SHLKKLDLRD NMFGVEGGIA LAKTLSVLTH LTEIYMSYLN LEDEGTEALS EALLKSAPSL EVLELAGNDI TVKSTGNLAA
401: CIASKQSLAK LNLSENELKD EGTILIAKAV EGHDQLVEVD LSTNMIRRAG ARALAQTVVK KNTFKLLNIN GNFISEEGID EVNDMFKDCL DKLVPLDDND
501: PEGEDFEDED EEEEGEDGNE LESKLGSLKI KQGEE
101: KRGPQEESEV EVSKDGDVFF DISGGSRAFI EEEEARDLLR PLADPRNSYT KIRFSNRSFG SEAAKFAASV LSSIKDQLTE VDLSDFVAGR PEAEALEVMN
201: MFSSALEGSK LRYLNLSDNA LGEKGIRAFA SLINSQHDLE ELYLMNDGIS EDAARAVREL LPSTDKIRVL QFHNNMTGDE GATAIAEIVR ECPSLEDFRC
301: SSTRIGSEGG VALAEALEHC SHLKKLDLRD NMFGVEGGIA LAKTLSVLTH LTEIYMSYLN LEDEGTEALS EALLKSAPSL EVLELAGNDI TVKSTGNLAA
401: CIASKQSLAK LNLSENELKD EGTILIAKAV EGHDQLVEVD LSTNMIRRAG ARALAQTVVK KNTFKLLNIN GNFISEEGID EVNDMFKDCL DKLVPLDDND
501: PEGEDFEDED EEEEGEDGNE LESKLGSLKI KQGEE
Arabidopsis Description
RANGAP1RAN GTPase-activating protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE82]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.