Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27720 | Canola | cytosol, mitochondrion | 68.06 | 53.5 |
| Bra020788.1-P | Field mustard | cytosol, mitochondrion | 59.16 | 47.88 |
| AT3G06000.1 | Thale cress | cytosol | 48.17 | 43.6 |
| CDY16082 | Canola | cytosol | 17.28 | 29.2 |
| CDY02566 | Canola | cytosol | 26.18 | 25.25 |
| Os05t0409200-00 | Rice | cytosol | 14.14 | 25.23 |
| CDX93931 | Canola | cytosol | 31.94 | 18.05 |
| EES07543 | Sorghum | cytosol | 17.8 | 13.55 |
| KRG91256 | Soybean | endoplasmic reticulum | 34.55 | 12.41 |
| KRH35557 | Soybean | endoplasmic reticulum, nucleus | 34.55 | 12.38 |
| CDX92540 | Canola | cytosol | 36.13 | 12.32 |
| Zm00001d017239_P001 | Maize | mitochondrion, plasma membrane | 32.98 | 12.05 |
| CDY56462 | Canola | cytosol, plastid | 32.46 | 11.59 |
| PGSC0003DMT400023310 | Potato | plastid | 33.51 | 11.57 |
| TraesCS1D01G255600.1 | Wheat | cytosol, plastid | 33.51 | 11.53 |
| Solyc01g079680.2.1 | Tomato | plastid | 32.98 | 11.45 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 32.46 | 11.31 |
| TraesCS1B01G266900.1 | Wheat | plastid | 32.46 | 11.25 |
| Zm00001d051112_P001 | Maize | plasma membrane | 30.37 | 11.24 |
| CDX89174 | Canola | plastid | 30.89 | 10.95 |
| TraesCS1A01G256200.1 | Wheat | cytosol | 31.41 | 10.91 |
| EES05430 | Sorghum | cytosol, nucleus, plastid | 30.89 | 10.87 |
| VIT_19s0014g03800.t01 | Wine grape | cytosol, plastid | 29.84 | 10.84 |
| TraesCS3B01G433100.1 | Wheat | cytosol, plastid | 31.41 | 10.83 |
| TraesCS3D01G394300.1 | Wheat | cytosol, plastid | 31.41 | 10.83 |
| VIT_05s0020g02970.t01 | Wine grape | cytosol, plastid | 30.37 | 10.76 |
| EES05435 | Sorghum | cytosol, plastid | 31.41 | 10.75 |
| HORVU3Hr1G090080.1 | Barley | plastid | 30.89 | 10.65 |
| CDX76683 | Canola | mitochondrion | 32.46 | 10.51 |
| TraesCS3A01G400100.1 | Wheat | plastid | 31.41 | 10.19 |
| Os05t0543200-01 | Rice | plasma membrane | 28.8 | 10.11 |
| HORVU1Hr1G063300.3 | Barley | plastid | 31.41 | 9.19 |
| GSMUA_Achr8P13660_001 | Banana | cytosol | 28.27 | 8.82 |
| Zm00001d034691_P001 | Maize | cytosol | 15.71 | 7.89 |
| CDY44911 | Canola | cytosol | 6.81 | 5.18 |
| Zm00001d043604_P002 | Maize | cytosol | 12.57 | 4.47 |
| CDY55048 | Canola | plastid | 13.09 | 4.19 |
| CDY20626 | Canola | plastid | 13.09 | 4.19 |
| CDX93413 | Canola | plastid | 13.09 | 4.19 |
| CDY20954 | Canola | plastid | 13.09 | 4.15 |
| Zm00001d052426_P001 | Maize | cytosol | 2.62 | 3.65 |
| Zm00001d046105_P001 | Maize | peroxisome | 9.95 | 3.23 |
| CDX93932 | Canola | cytosol | 0.52 | 0.87 |
Protein Annotations
| EnsemblPlants:CDY05221 | EnsemblPlantsGene:GSBRNA2T00120031001 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | ncoils:Coil | PANTHER:PTHR24106 |
| PANTHER:PTHR24106:SF248 | PFAM:PF13516 | ProteinID:CDY05221 | ProteinID:CDY05221.1 | SEG:seg | SMART:SM00368 |
| SUPFAM:SSF52047 | UniParc:UPI0004EE6CD5 | MapMan:35.1 | : | : | : |
Description
BnaC05g45820D
Coordinates
chrLK031960:+:420732..421469
Molecular Weight (calculated)
21599.3 Da
IEP (calculated)
4.238
GRAVY (calculated)
-0.511
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKRRALLVN MRNKTKELEV KLAETSLTKK EAMKENESVS TCPHMKLRVP VSKSFSSFNF MTIINLSYTN LENEGAIALV NALENSAPSL KAIEVAGNNI
101: TYEAAPDISA CLAAKKHLKR LNLSNNDLKD EGCIEEIMEI FKNCPKLLGP FDENDSDEGD EDDVDDDDQE WESESLHEDF EDEFVSVFYF Y
101: TYEAAPDISA CLAAKKHLKR LNLSNNDLKD EGCIEEIMEI FKNCPKLLGP FDENDSDEGD EDDVDDDDQE WESESLHEDF EDEFVSVFYF Y
001: MVDTSLTNED TIEETAFETC THIKVGVSMS KPFSSFSFLT VINLSYTNLE NGGAIALVNA LKNSAPSLQV IEMAGNNITY EAATAIAVCL AAKRHLKKLN
101: LSENDLKDEG CVEIVKSMED WELEYVDMSY NDLRREGALR LARVVVKKGS FKMLNIDGNM ISLKGIEEIK VIFTNCPKLL GPLDKNVYNV DDDDDLREND
201: EDEFVSVFIF Y
101: LSENDLKDEG CVEIVKSMED WELEYVDMSY NDLRREGALR LARVVVKKGS FKMLNIDGNM ISLKGIEEIK VIFTNCPKLL GPLDKNVYNV DDDDDLREND
201: EDEFVSVFIF Y
Arabidopsis Description
F2O10.4 protein [Source:UniProtKB/TrEMBL;Acc:Q9SFG4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.