Factsheet for TraesCS3B01G433100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G331000.1
TraesCS2B01G351300.1
TraesCS2D01G332000.1
TraesCS3A01G158400.1
TraesCS3D01G166100.1
TraesCS5A01G257000.1
TraesCS5B01G256500.1
TraesCS5D01G265600.1
TraesCS6A01G272000.1
TraesCS6B01G299600.1
TraesCS6D01G252200.1
TraesCS7A01G042800.1
TraesCS7A01G240200.1
TraesCS7B01G135800.1
TraesCS7D01G038700.1
TraesCS7D01G238200.1
TraesCSU01G064900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63130.1	TraesCS6A01G272000.1	AT3G50910.1	21798944
AT3G63130.1	TraesCS6B01G299600.1	AT3G50910.1	21798944
AT3G63130.1	TraesCS6D01G252200.1	AT3G50910.1	21798944
AT3G63130.1	TraesCS2A01G331000.1	AT4G26455.1	17600715
AT3G63130.1	TraesCS2B01G351300.1	AT4G26455.1	17600715
AT3G63130.1	TraesCS2D01G332000.1	AT4G26455.1	17600715
AT3G63130.1	TraesCS5A01G257000.1	AT4G26455.1	17600715
AT3G63130.1	TraesCS5B01G256500.1	AT4G26455.1	17600715
AT3G63130.1	TraesCS5D01G265600.1	AT4G26455.1	17600715
AT3G63130.1	TraesCS7A01G240200.1	AT4G26455.1	17600715
AT3G63130.1	TraesCS7B01G135800.1	AT4G26455.1	17600715
AT3G63130.1	TraesCS7D01G238200.1	AT4G26455.1	17600715
AT3G63130.1	TraesCS2A01G331000.1	AT4G26455.1	20579133
AT3G63130.1	TraesCS2B01G351300.1	AT4G26455.1	20579133
AT3G63130.1	TraesCS2D01G332000.1	AT4G26455.1	20579133
AT3G63130.1	TraesCS5A01G257000.1	AT4G26455.1	20579133
AT3G63130.1	TraesCS5B01G256500.1	AT4G26455.1	20579133
AT3G63130.1	TraesCS5D01G265600.1	AT4G26455.1	20579133
AT3G63130.1	TraesCS7A01G240200.1	AT4G26455.1	20579133
AT3G63130.1	TraesCS7B01G135800.1	AT4G26455.1	20579133
AT3G63130.1	TraesCS7D01G238200.1	AT4G26455.1	20579133
AT3G63130.1	TraesCS3A01G158400.1	AT5G11390.1	18591351
AT3G63130.1	TraesCS3D01G166100.1	AT5G11390.1	18591351
AT3G63130.1	TraesCS7A01G042800.1	AT5G11390.1	18591351
AT3G63130.1	TraesCS7D01G038700.1	AT5G11390.1	18591351
AT3G63130.1	TraesCSU01G064900.1	AT5G11390.1	18591351
AT3G63130.1	TraesCS2A01G331000.1	AT5G56210.1	17600715
AT3G63130.1	TraesCS2B01G351300.1	AT5G56210.1	17600715
AT3G63130.1	TraesCS2D01G332000.1	AT5G56210.1	17600715
AT3G63130.1	TraesCS5A01G257000.1	AT5G56210.1	17600715
AT3G63130.1	TraesCS5B01G256500.1	AT5G56210.1	17600715
AT3G63130.1	TraesCS5D01G265600.1	AT5G56210.1	17600715
AT3G63130.1	TraesCS7A01G240200.1	AT5G56210.1	17600715
AT3G63130.1	TraesCS7B01G135800.1	AT5G56210.1	17600715
AT3G63130.1	TraesCS7D01G238200.1	AT5G56210.1	17600715
AT3G63130.1	TraesCS2A01G331000.1	AT5G56210.1	20579133
AT3G63130.1	TraesCS2B01G351300.1	AT5G56210.1	20579133
AT3G63130.1	TraesCS2D01G332000.1	AT5G56210.1	20579133
AT3G63130.1	TraesCS5A01G257000.1	AT5G56210.1	20579133
AT3G63130.1	TraesCS5B01G256500.1	AT5G56210.1	20579133
AT3G63130.1	TraesCS5D01G265600.1	AT5G56210.1	20579133
AT3G63130.1	TraesCS7A01G240200.1	AT5G56210.1	20579133
AT3G63130.1	TraesCS7B01G135800.1	AT5G56210.1	20579133
AT3G63130.1	TraesCS7D01G238200.1	AT5G56210.1	20579133
AT5G19320.1	TraesCS2A01G331000.1	AT4G26455.1	17600715
AT5G19320.1	TraesCS2B01G351300.1	AT4G26455.1	17600715
AT5G19320.1	TraesCS2D01G332000.1	AT4G26455.1	17600715
AT5G19320.1	TraesCS5A01G257000.1	AT4G26455.1	17600715
AT5G19320.1	TraesCS5B01G256500.1	AT4G26455.1	17600715
AT5G19320.1	TraesCS5D01G265600.1	AT4G26455.1	17600715
AT5G19320.1	TraesCS7A01G240200.1	AT4G26455.1	17600715
AT5G19320.1	TraesCS7B01G135800.1	AT4G26455.1	17600715
AT5G19320.1	TraesCS7D01G238200.1	AT4G26455.1	17600715
AT5G19320.1	TraesCS3A01G158400.1	AT5G11390.1	18591351
AT5G19320.1	TraesCS3D01G166100.1	AT5G11390.1	18591351
AT5G19320.1	TraesCS7A01G042800.1	AT5G11390.1	18591351
AT5G19320.1	TraesCS7D01G038700.1	AT5G11390.1	18591351
AT5G19320.1	TraesCSU01G064900.1	AT5G11390.1	18591351
AT5G19320.1	TraesCS2A01G331000.1	AT5G56210.1	17600715
AT5G19320.1	TraesCS2B01G351300.1	AT5G56210.1	17600715
AT5G19320.1	TraesCS2D01G332000.1	AT5G56210.1	17600715
AT5G19320.1	TraesCS5A01G257000.1	AT5G56210.1	17600715
AT5G19320.1	TraesCS5B01G256500.1	AT5G56210.1	17600715
AT5G19320.1	TraesCS5D01G265600.1	AT5G56210.1	17600715
AT5G19320.1	TraesCS7A01G240200.1	AT5G56210.1	17600715
AT5G19320.1	TraesCS7B01G135800.1	AT5G56210.1	17600715
AT5G19320.1	TraesCS7D01G238200.1	AT5G56210.1	17600715

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G394300.1	Wheat	cytosol, plastid	99.1	99.1
HORVU3Hr1G090080.1	Barley	plastid	96.03	96.03
TraesCS3A01G400100.1	Wheat	plastid	97.11	91.34
TraesCS1B01G266900.1	Wheat	plastid	86.46	86.93
Os05t0543200-01	Rice	plasma membrane	82.67	84.19
EES05430	Sorghum	cytosol, nucleus, plastid	80.69	82.32
Zm00001d051112_P001	Maize	plasma membrane	75.81	81.4
EES05435	Sorghum	cytosol, plastid	80.14	79.57
Zm00001d017239_P001	Maize	mitochondrion, plasma membrane	74.01	78.39
EES07543	Sorghum	cytosol	34.66	76.49
VIT_07s0104g00520.t01	Wine grape	plastid	65.16	66.73
GSMUA_Achr11P...	Banana	cytosol, plastid	65.88	66.61
KRH71426	Soybean	nucleus	62.27	64.73
KRH32020	Soybean	cytosol	62.27	64.61
VIT_05s0020g02970.t01	Wine grape	cytosol, plastid	62.64	64.38
Solyc09g065190.1.1	Tomato	plastid	60.83	63.11
PGSC0003DMT400086322	Potato	cytosol	60.83	63.11
VIT_19s0014g03800.t01	Wine grape	cytosol, plastid	59.39	62.55
Zm00001d052426_P001	Maize	cytosol	15.34	62.04
KRG91256	Soybean	endoplasmic reticulum	59.57	62.03
KRH35557	Soybean	endoplasmic reticulum, nucleus	59.21	61.54
AT5G19320.1	Thale cress	cytosol	60.47	61.47
Solyc01g079680.2.1	Tomato	plastid	60.29	60.73
PGSC0003DMT400023310	Potato	plastid	60.29	60.4
CDY56462	Canola	cytosol, plastid	57.76	59.81
Bra007730.1-P	Field mustard	cytosol, plastid	57.76	59.81
Zm00001d034691_P001	Maize	cytosol	40.97	59.74
AT3G63130.1	Thale cress	plastid	57.58	59.63
CDX92540	Canola	cytosol	59.93	59.29
CDX93931	Canola	cytosol	35.2	57.69
Bra040432.1-P	Field mustard	plastid	55.05	56.9
CDX89174	Canola	plastid	55.05	56.59
CDY16082	Canola	cytosol	11.37	55.75
Os05t0409200-00	Rice	cytosol	10.65	55.14
CDX76683	Canola	mitochondrion	57.58	54.07
CDY02566	Canola	cytosol	19.13	53.54
CDX93932	Canola	cytosol	10.83	52.17
Bra026911.1-P	Field mustard	cytosol	12.27	51.52
Bra013834.1-P	Field mustard	cytosol	11.55	48.48
GSMUA_Achr8P13660_001	Banana	cytosol	52.71	47.71
Bra020034.1-P	Field mustard	cytosol	20.04	45.12
CDY44911	Canola	cytosol	19.86	43.82
AT3G06000.1	Thale cress	cytosol	14.26	37.44
Zm00001d043604_P002	Maize	cytosol	35.74	36.87
CDY27720	Canola	cytosol, mitochondrion	15.16	34.57
Zm00001d046105_P001	Maize	peroxisome	36.46	34.35
Bra020788.1-P	Field mustard	cytosol, mitochondrion	14.62	34.32
CDY05221	Canola	cytosol, mitochondrion, nucleus, plastid	10.83	31.41
TraesCS7B01G100000.1	Wheat	plastid	15.52	14.03

Protein Annotations

Gene3D:1.10.246.200	MapMan:23.5.1.5	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:IPR038214	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF13516
PFAM:PF13943	PANTHER:PTHR24106	PANTHER:PTHR24106:SF248	SMART:SM00368	SUPFAM:SSF52047	EnsemblPlantsGene:TraesCS3B01G433100
EnsemblPlants:TraesCS3B01G433100.1	InterPro:WPP_dom	InterPro:WPP_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chr3B:-:672099585..672101249

Molecular Weight (calculated)

59937.8 Da

IEP (calculated)

4.289

GRAVY (calculated)

-0.343

Length

554 amino acids

Sequence
(BLAST)

001: MASAAQDFQP RTFSIKLWPP SESTRLMLVE RMTKNLSSES IFSRKYGLLG KEEAHKNAKR IEEMCFASAD EHFKKEPDGD GSSVVQLYAK ETSKLMLEVL
101: KKGPGTTAEP EAPVIDTPIE PADTVFDISG GKRAFIEAEE AKELLSPLTE PGNSYSRICL SNRSFGIGAA NVAGPILESI KSQLKEVDIS DFVAGRPEDE
201: ALDVMRIFSK ALAGSVLRYL NISDNALGEK GVRAFTELLK SQGNLEELYV MNDGISGEAA KALSELIPST EKLKVLHFHN NMTGDEGAMF IAEMVKRSPN
301: LESFRCSATR IGSDGGVALA EALGTCTRLK KLDIRDNLFG VEAGVALSET LPKLGDLVEL YLSDLNLENE GTIAIVNVLK ESAPQLEILE MAGNEITAEA
401: AKPLAECLTA MQSLKKLTLA ENELKDAGAA AVAKSLQEGH PDLKELDVST NLFQRSGARC FAQAVANKPG FVLLNMNANY IPEEGIDEVR KILKAGENSA
501: DVLGPLDENE PEGNPDDEDE EEDDDDEAKY GDDNGKDAGL GSKLQDLKVE AEED

Best Arabidopsis Sequence Match ( AT5G19320.2 )
(BLAST)

001: MADILDSRPH AFSIKLWPPS LPTRKALIER ITNNFSSKTI FTEKYGSLTK DQATENAKRI EDIAFSTANQ QFEREPDGDG GSAVQLYAKE CSKLILEVLK
101: KGPVAKVAAR ELISEDSVSP RETFFDISKG KRAFIEAEEA EELLKPLKEP GNAYTKICFS NRSFGLGAAR VAEPILASLK DQLKEVDLSD FVAGRPELEA
201: LEVMNIFSDA LQGSILSSLN LSDNALGEKG VRAFGALLKS LSSLEELYLM NDGISKEAAQ AVSELIPSTE NLRVLHFHNN MTGDEGALAI AEVVKRSPLL
301: ENFRCSSTRV GSKGGIALSE ALEHCTHMEK LDLRDNMFGT EAGVSLSKTL SSFKHMTELY LSYLNLEDEG AIAIVNALKE SASPIEVLEM AGNDITVEAA
401: SAIAACVAAK QDLNKLNLSE NELKDEGCVQ IANCIEEGHS KLQYIDMSTN YIRRAGARAL AHVVVKKEAF KLLNIDGNII SEEGIEELKE IFKKSPELLG
501: ALDENDPDGE EDDDDEEDEE DEENEGNGNG ELESKLKNLE VNQED

Arabidopsis Description

RANGAP2RANGAP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UQD1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.