Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G038700.1 | Wheat | cytosol | 94.41 | 94.41 |
| TraesCSU01G064900.1 | Wheat | cytosol | 94.41 | 94.13 |
| HORVU7Hr1G007940.7 | Barley | mitochondrion | 88.38 | 83.01 |
| Os05t0241000-01 | Rice | nucleus | 63.09 | 64.13 |
| KXG21620 | Sorghum | cytosol | 54.41 | 57.19 |
| TraesCS3A01G158400.1 | Wheat | cytosol | 51.47 | 52.01 |
| Zm00001d010047_P001 | Maize | plastid | 53.97 | 49.0 |
| GSMUA_Achr1P19080_001 | Banana | nucleus | 38.82 | 43.85 |
| GSMUA_Achr7P06030_001 | Banana | cytosol, golgi, nucleus | 39.41 | 40.36 |
| VIT_14s0083g00730.t01 | Wine grape | nucleus | 37.94 | 36.13 |
| KRH18315 | Soybean | nucleus | 28.97 | 35.37 |
| KRG93747 | Soybean | nucleus | 28.38 | 35.09 |
| PGSC0003DMT400068312 | Potato | cytosol, golgi, nucleus | 34.26 | 34.06 |
| Solyc02g065660.2.1 | Tomato | nucleus, plastid | 30.88 | 33.55 |
| KRH01441 | Soybean | cytosol | 31.76 | 33.23 |
| CDX95976 | Canola | cytosol, peroxisome, plastid | 17.06 | 31.02 |
| CDX69762 | Canola | nucleus | 29.56 | 30.69 |
| Bra008966.1-P | Field mustard | nucleus | 29.56 | 30.64 |
| AT5G11390.1 | Thale cress | cytosol, golgi, nucleus | 31.62 | 30.58 |
| AT1G68910.1 | Thale cress | cytosol | 27.94 | 30.3 |
| CDX97101 | Canola | cytosol, golgi, nucleus | 29.12 | 30.0 |
| PGSC0003DMT400050565 | Potato | cytosol, golgi, nucleus | 30.74 | 29.77 |
| Solyc05g010590.2.1 | Tomato | nucleus | 30.44 | 29.49 |
| CDX81573 | Canola | cytosol | 27.35 | 29.15 |
| CDY33569 | Canola | cytosol, golgi, peroxisome | 27.79 | 29.08 |
| CDY45838 | Canola | cytosol, golgi, nucleus | 27.5 | 29.04 |
| Bra004347.1-P | Field mustard | cytosol | 28.38 | 28.76 |
| VIT_01s0010g00750.t01 | Wine grape | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 29.85 | 27.62 |
| KRH75191 | Soybean | cytosol | 27.65 | 27.61 |
| KRH71037 | Soybean | cytosol | 28.38 | 27.26 |
| Bra038339.1-P | Field mustard | nucleus | 27.35 | 26.09 |
| CDX95975 | Canola | cytosol | 6.62 | 24.06 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G042800.1 | EnsemblPlantsGene:TraesCS7A01G042800 | ncoils:Coil | PANTHER:PTHR35705 | PANTHER:PTHR35705:SF6 | SEG:seg |
| TMHMM:TMhelix | MapMan:20.4.2.2 | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:19955864..19958742
Molecular Weight (calculated)
75267.6 Da
IEP (calculated)
4.412
GRAVY (calculated)
-0.461
Length
680 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAENTINDI LAQENALSPG DRMNAVGTNM ESLTRVELDL AFASEKLLNL EMLVMEIARR ATDFEPLTLE SGSVSSETAE DAFELDTLYG ILDAEVQELD
101: DMISSIQIDA KNVEDKVYDE ESGGKVKAKL DAAMASLKQM QDLIADIRKE SAKFEKPIEF SSDKAGIAEH GVCENGHVSS VTSMHTEDER RNVLQMLEQS
201: IASELDLEKK LSDSRYAVEE LKMKLRLQTQ ETSFLEELTE TNSGRLFEAE NASEILLGTS RELINELNTI QVHLTASRSR EDDLNSKLER SLMELSSLKL
301: NQEKMQEESK KVETEEAVQN EARSNPELLS LQHQVEELEK HFRESNSQLL LENVSAEVSQ EKENVMLTEL STLESIIKNL KADVLRAENR AQNAEVRCMQ
401: LTKDNVELSG ELSSLKSQGS DKASLLEREL SESNAQLEHA KASVAAFAEQ QGMLKSTVSD MEHMIEDLKG KVSKSETRAL NAESKCALLA DTNLELSEEL
501: SFLRARVEGL ESSLQEANHV KVSTIKDIGL RTKVITELVT KLAMERERLH LQISMLTKKN RILTHRCKGT SVKDGTKLYK NATGKDAELQ FTTSAEEIVS
601: DSSSAQNVAE KASDLIDGKV EAEGSTGEEE DDSTDEGALR TIKPSAALSW KYVATALLAV VAAVVVCHLL LENGWEGRTA
101: DMISSIQIDA KNVEDKVYDE ESGGKVKAKL DAAMASLKQM QDLIADIRKE SAKFEKPIEF SSDKAGIAEH GVCENGHVSS VTSMHTEDER RNVLQMLEQS
201: IASELDLEKK LSDSRYAVEE LKMKLRLQTQ ETSFLEELTE TNSGRLFEAE NASEILLGTS RELINELNTI QVHLTASRSR EDDLNSKLER SLMELSSLKL
301: NQEKMQEESK KVETEEAVQN EARSNPELLS LQHQVEELEK HFRESNSQLL LENVSAEVSQ EKENVMLTEL STLESIIKNL KADVLRAENR AQNAEVRCMQ
401: LTKDNVELSG ELSSLKSQGS DKASLLEREL SESNAQLEHA KASVAAFAEQ QGMLKSTVSD MEHMIEDLKG KVSKSETRAL NAESKCALLA DTNLELSEEL
501: SFLRARVEGL ESSLQEANHV KVSTIKDIGL RTKVITELVT KLAMERERLH LQISMLTKKN RILTHRCKGT SVKDGTKLYK NATGKDAELQ FTTSAEEIVS
601: DSSSAQNVAE KASDLIDGKV EAEGSTGEEE DDSTDEGALR TIKPSAALSW KYVATALLAV VAAVVVCHLL LENGWEGRTA
001: METETEHDRT VSVDDNDSLV PEPSSTKESF FEDLSLTGQV MNPQLSSAGE VLTKVELDFA FVSEKLVNLS LLTMQLGTRE NDFESFVSKK EEDEEEPSSN
101: VDDDDDSAEK ALEFDLLSSI LNSEVKELES LLGFLQNEIQ SARVMISPFQ HDGEAFLDLE GKLNDTEQSL GQLMEQVVEM KKQSSNFQRL SSGLDEQGSW
201: SGGQTSVSQN DGEFGDLSAK INMQTADQQR NVLRMLEKSL AKEMELEKKL SESRNTEREL EMKLYSSEQD VVYMEEVTED AFSRWLEADN AAEVFKGTSK
301: EMSGKLQILQ FNLSGSFKRE DNLKSKLVDS KERLEAKECA LHKLDSSNAR LADFLVAQTE GLKESLQEAE EKLILLNTEN STLSEKVSSL EEQLNEYGIQ
401: TEDADATSGA LITDLERINE ELKDKLAKTE ARAEETESKC KILEESKKEL QDELGNFRDK GFTIHKLASL EKHLRDSDLQ LEHAVAAVEA SKEKQNLLYS
501: TVSDMEDVIE DLKSKVLKAE NRADITEEKL IMVSESNAEV NEELKFFKGR LKEGEKYLQQ AEERKLRTAK DIGVHNKIMK KLVMQLAAER ERLHKQITNL
601: SRENCVLMVK LKKVGKTGYM ESGNGSEVSP KSDQNASSCH QGSRLQATFI SLTNPEEEET GSKSDIGSVR RLDVGALRFK HILVAILVIL ISSIAYVISQ
701: QNM
101: VDDDDDSAEK ALEFDLLSSI LNSEVKELES LLGFLQNEIQ SARVMISPFQ HDGEAFLDLE GKLNDTEQSL GQLMEQVVEM KKQSSNFQRL SSGLDEQGSW
201: SGGQTSVSQN DGEFGDLSAK INMQTADQQR NVLRMLEKSL AKEMELEKKL SESRNTEREL EMKLYSSEQD VVYMEEVTED AFSRWLEADN AAEVFKGTSK
301: EMSGKLQILQ FNLSGSFKRE DNLKSKLVDS KERLEAKECA LHKLDSSNAR LADFLVAQTE GLKESLQEAE EKLILLNTEN STLSEKVSSL EEQLNEYGIQ
401: TEDADATSGA LITDLERINE ELKDKLAKTE ARAEETESKC KILEESKKEL QDELGNFRDK GFTIHKLASL EKHLRDSDLQ LEHAVAAVEA SKEKQNLLYS
501: TVSDMEDVIE DLKSKVLKAE NRADITEEKL IMVSESNAEV NEELKFFKGR LKEGEKYLQQ AEERKLRTAK DIGVHNKIMK KLVMQLAAER ERLHKQITNL
601: SRENCVLMVK LKKVGKTGYM ESGNGSEVSP KSDQNASSCH QGSRLQATFI SLTNPEEEET GSKSDIGSVR RLDVGALRFK HILVAILVIL ISSIAYVISQ
701: QNM
Arabidopsis Description
WIT1WPP domain-interacting tail-anchored protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7E5]
SUBAcon: [golgi,nucleus,cytosol]
SUBAcon: [golgi,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.