Factsheet for VIT_01s0010g00750.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:

plastid 2
mitochondrion 3
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95976	Canola	cytosol, peroxisome, plastid	23.13	45.45
VIT_14s0083g00730.t01	Wine grape	nucleus	43.95	45.24
AT1G68910.1	Thale cress	cytosol	38.5	45.14
KRH75191	Soybean	cytosol	41.5	44.79
KRH71037	Soybean	cytosol	42.18	43.79
PGSC0003DMT400050565	Potato	cytosol, golgi, nucleus	41.77	43.73
GSMUA_Achr1P19080_001	Banana	nucleus	35.78	43.69
Solyc05g010590.2.1	Tomato	nucleus	41.36	43.3
CDX81573	Canola	cytosol	37.55	43.26
CDY45838	Canola	cytosol, golgi, nucleus	37.82	43.17
CDY33569	Canola	cytosol, golgi, peroxisome	37.96	42.92
Bra004347.1-P	Field mustard	cytosol	37.55	41.13
GSMUA_Achr7P06030_001	Banana	cytosol, golgi, nucleus	36.33	40.21
Bra038339.1-P	Field mustard	nucleus	37.82	38.99
CDX95975	Canola	cytosol	8.71	34.22
KXG21620	Sorghum	cytosol	29.39	33.38
Os05t0241000-01	Rice	nucleus	30.07	33.03
Zm00001d039272_P003	Maize	cytosol	28.71	32.31
HORVU3Hr1G057330.1	Barley	cytosol	29.12	32.18
OQU86053	Sorghum	cytosol, golgi, nucleus	29.12	32.13
TraesCS3A01G158400.1	Wheat	cytosol	28.84	31.5
TraesCS3D01G166100.1	Wheat	cytosol	27.62	31.04
TraesCS7D01G038700.1	Wheat	cytosol	28.16	30.44
TraesCSU01G064900.1	Wheat	cytosol	28.16	30.35
Os01t0235350-00	Rice	cytosol	28.57	30.0
TraesCS7A01G042800.1	Wheat	cytosol	27.62	29.85
HORVU7Hr1G007940.7	Barley	mitochondrion	28.44	28.87
Zm00001d010047_P001	Maize	plastid	29.25	28.7

Protein Annotations

ArrayExpress:VIT_01s0010g00750	EMBL:FN595754	EnsemblPlants:VIT_01s0010g00750.t01	EnsemblPlantsGene:VIT_01s0010g00750	GO:GO:0005575	GO:GO:0008150
GO:GO:0009653	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:2000769
ncoils:Coil	PANTHER:PTHR35705	PANTHER:PTHR35705:SF2	ProteinID:CBI27417	ProteinID:CBI27417.3	SEG:seg
SUPFAM:SSF57997	TMHMM:TMhelix	UniParc:UPI0001BE299B	UniProt:D7TA95	MapMan:20.4.2.2	:

Description

No Description!

Coordinates

chr1:+:15925062..15931423

Molecular Weight (calculated)

83496.2 Da

IEP (calculated)

4.577

GRAVY (calculated)

-0.385

Length

735 amino acids

Sequence
(BLAST)

001: MTTGSRSACN SNHPIIRFGQ CALLTYSGAR LLLLRCLASR KILLKVAEEK NEGMGMDNNV VDDTDMNGKG MEELECAVKV LLSLDLDLAY SSEKLVNLHV
101: LLMQVWAREN VFEAMAMEKD HISADSIEKA LVFDLLSGIL DSEVREIENF MDTLQAEIVD AHKKIYSCSH LRELFNVMEE KLIDCEESLK QSQEQVLKMN
201: TQLAKFQRVF LEFEYQNGKN DENIDSRENG QLSNINLKLK MPAVRQQRHI LRVLDKSLER ELDLEKKLLE IRQSEEELKL KMHLTEQVGF CMEEAAGAIY
301: GRFLEAENLA EVLMGISKEL VGRLQIAQFN LNGSIQREAE AKYKLLDCME QLKAKETASQ RLEKINSEPF NFDESEVFTL REKIQLLEEQ LKESELQLKN
401: AHASNEAMQE QLSGMDNLIE SLKEGILKAE SKAESAEGKL TLLTETNLEL TEEMGFLKDS TTEKAGSLEK QLRDLQIQLQ HAKASSEASQ EQQNMLYSAI
501: WDMETLIEEL KSKVSKAESK TENAEEQCIL LTETNFELNK ELGFLRDKMD CLEKTLHQVK CEKTASAEDI SIRTRLIMDM VMQLAFERER IQKQLYSLTE
601: DNRILVEKIQ KAKNNASVIM YGNGDGEEKD FLFVKHNSAT ATQAKTFKET VTEPLQKSQV DEPSKDSPEP ETEVETSVSA KDAANVVSEL GAVNVVGERR
701: LDLIYIFVAV LVLLIPVATI YLFNKKLIMD DAFNG

Best Arabidopsis Sequence Match ( AT1G68910.1 )
(BLAST)

001: MEEIIREDYF EALSSRNEEE QEMLRMLTKL EIDSAYTSEK LMNLHVLLMH LLAWDNDLEG MGTLDSSPAS FEKALTFDLL CGILESEVKE VDEVLDVLEA
101: QIVDTSYKIS SCKHGNYIVI EGKLGESAES LKQSRGQVSE ITLQLAQLRR TLHYIRNGTS ENEESVELRQ KYALKPSDLR HKNALRMLEK SLSRELELEK
201: KLMEFQQNEE QLKLKLHYTE EVSSRMEEAS EFIWGRFLEA DNSSEVLTGI SKELVGRLQI LQFSLNGSAQ RESELKSKLE DCTVQLEAKD LLVQKLEGTI
301: SENSEIVSEV LTLREYVKSA EQKLKNTDLE LKSVNASKQE ILVHLAEMEN ANESVKENLF EAESRAESGE AKIKELDAAN LELTEELNFL KDADDKKTKK
401: VNSLEKQVRE LEVQVQNSKV SSEANQEQQN MLYSAIWDME TLIEDLKSKA SKAESRTETV EEQCIVLSTT NSELNKDVSF LRQKAKSLEA MLDLANNEKE
501: RYAQEITTRN KVLMDMMLQL SSERERIQEQ LYSLAKENKI LRVNQCSNTY QRNGSYAGDK ELSFHADGHE IEALAESLQE DERTREEPEK QSVSEKSSEI
601: RRAIKLKHIL VVALVFVLFC SFFGVTY

Arabidopsis Description

WIT2WPP domain-interacting tail-anchored protein 2 [Source:UniProtKB/Swiss-Prot;Acc:A8MQR0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.