Factsheet for Os01t0235350-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0235350-00
Os03t0209000-01
Os04t0471300-01
Os05t0241000-01
Os05t0409200-00
Os05t0543200-01
Os08t0497900-01
Os09t0481300-01
Os10t0337700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G11390.1	Os05t0409200-00	AT3G63130.1	18591351
AT5G11390.1	Os05t0543200-01	AT3G63130.1	18591351
AT5G11390.1	Os04t0471300-01	AT4G26455.1	18591351
AT5G11390.1	Os08t0497900-01	AT4G26455.1	18591351
AT5G11390.1	Os09t0481300-01	AT4G26455.1	18591351
AT5G11390.1	Os01t0235350-00	AT5G11390.1	18591351
AT5G11390.1	Os05t0241000-01	AT5G11390.1	18591351
AT5G11390.1	Os05t0409200-00	AT5G19320.1	18591351
AT5G11390.1	Os05t0543200-01	AT5G19320.1	18591351
AT5G11390.1	Os03t0209000-01	AT5G27940.1	18591351
AT5G11390.1	Os10t0337700-01	AT5G27940.1	18591351

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G057330.1	Barley	cytosol	55.86	58.8
TraesCS3A01G158400.1	Wheat	cytosol	56.14	58.4
TraesCS3D01G166100.1	Wheat	cytosol	53.43	57.19
OQU86053	Sorghum	cytosol, golgi, nucleus	52.43	55.11
Zm00001d039272_P003	Maize	cytosol	50.71	54.36
Os05t0241000-01	Rice	nucleus	49.14	51.42
GSMUA_Achr1P19080_001	Banana	nucleus	35.14	40.86
GSMUA_Achr7P06030_001	Banana	cytosol, golgi, nucleus	36.0	37.95
KRG93747	Soybean	nucleus	26.71	34.0
VIT_14s0083g00730.t01	Wine grape	nucleus	34.43	33.75
KRH18315	Soybean	nucleus	26.14	32.85
Solyc02g065660.2.1	Tomato	nucleus, plastid	29.14	32.59
CDX95976	Canola	cytosol, peroxisome, plastid	17.29	32.35
KRH01441	Soybean	cytosol	29.43	31.69
PGSC0003DMT400068312	Potato	cytosol, golgi, nucleus	30.71	31.43
AT1G68910.1	Thale cress	cytosol	28.0	31.26
CDY45838	Canola	cytosol, golgi, nucleus	28.57	31.06
CDY33569	Canola	cytosol, golgi, peroxisome	28.71	30.92
Bra008966.1-P	Field mustard	nucleus	28.86	30.79
CDX81573	Canola	cytosol	27.86	30.56
AT5G11390.1	Thale cress	cytosol, golgi, nucleus	30.57	30.44
CDX69762	Canola	nucleus	28.43	30.38
Bra004347.1-P	Field mustard	cytosol	28.57	29.81
CDX97101	Canola	cytosol, golgi, nucleus	27.86	29.55
VIT_01s0010g00750.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	30.0	28.57
Bra038339.1-P	Field mustard	nucleus	27.71	27.21
KRH75191	Soybean	cytosol	26.29	27.02
PGSC0003DMT400050565	Potato	cytosol, golgi, nucleus	27.0	26.92
Solyc05g010590.2.1	Tomato	nucleus	27.0	26.92
KRH71037	Soybean	cytosol	27.0	26.69
CDX95975	Canola	cytosol	6.71	25.13

Protein Annotations

MapMan:20.4.2.2	UniProt:A0A0P0V0A8	ProteinID:BAS71218.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006810
GO:GO:0006886	GO:GO:0008150	GO:GO:0008536	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:Os01g0235350
EnsemblPlants:Os01t0235350-00	PANTHER:PTHR35705	PANTHER:PTHR35705:SF6	SUPFAM:SSF57997	TMHMM:TMhelix	UniParc:UPI000393B11C
SEG:seg	:	:	:	:	:

Description

Conserved hypothetical protein. (Os01t0235350-00)

Coordinates

chr1:-:7473271..7476621

Molecular Weight (calculated)

77446.4 Da

IEP (calculated)

4.367

GRAVY (calculated)

-0.431

Length

700 amino acids

Sequence
(BLAST)

001: MAMRVVRVLD ALGANDEFAP PSNIEDQKES KNHMDTESIQ DGDDILLSGG DDDRNGGSIA EIQTTVDLGV AFGSEKLLNL EMLLMEIAHR ATEIEPLVLD
101: AESISAESVQ RVSEFDLLHC ILDSEVKELE KLVDSIEVDI GNGGKMMASD EDPVSEVNSK LRDAAVSLNQ MQDLISAIRR QSANFVNVID PSQDNSGTSE
201: DGGYENGHGS SRSAMPAEEQ RNTLQLLNQS IASELDLGKK LHDSESVVEE LKLKLHHVEH ESYFLEESVE AISERMFAAE NASELFLGAS KELIGKVNTI
301: QFHLSASIRR EGDLKSKLEQ SLTESNGSNS TLEKMKQDSE KEVMPTQAQP DSEFLTLQDK IQQLEEWLRE SKSGLPLTIA STGENEVGED EMSTFENIVN
401: DIKDAVFRAE SRTQNAEAKC KQLSHANIQL DEELKSLKSQ GSDRAGLLEE KLKESETQLL HAKASIEAIV ERHSIFKSSM SDMEQVIDDL KEKYLKAETR
501: AENAESKCTL LTDTNLELSE ELSFLRGRVD TLENSLCKAN QLKMSAAKDI GIKTKTITDL VAKLALEREC LHLQLPGIFS VQIVTLTKKN RMLAQKCKEN
601: ITEVTLLNNK IAASEGELKT TKVMEEMVSD SSPTQTKVKR VADTLGEEED EITAPPEDNS GACSTPNTVR SIEPKILNWK WIFAAFLVLL VAVLVCLPYQ

Best Arabidopsis Sequence Match ( AT5G11390.1 )
(BLAST)

001: METETEHDRT VSVDDNDSLV PEPSSTKESF FEDLSLTGQV MNPQLSSAGE VLTKVELDFA FVSEKLVNLS LLTMQLGTRE NDFESFVSKK EEDEEEPSSN
101: VDDDDDSAEK ALEFDLLSSI LNSEVKELES LLGFLQNEIQ SARVMISPFQ HDGEAFLDLE GKLNDTEQSL GQLMEQVVEM KKQSSNFQRL SSGLDEQGSW
201: SGGQTSVSQN DGEFGDLSAK INMQTADQQR NVLRMLEKSL AKEMELEKKL SESRNTEREL EMKLYSSEQD VVYMEEVTED AFSRWLEADN AAEVFKGTSK
301: EMSGKLQILQ FNLSGSFKRE DNLKSKLVDS KERLEAKECA LHKLDSSNAR LADFLVAQTE GLKESLQEAE EKLILLNTEN STLSEKVSSL EEQLNEYGIQ
401: TEDADATSGA LITDLERINE ELKDKLAKTE ARAEETESKC KILEESKKEL QDELGNFRDK GFTIHKLASL EKHLRDSDLQ LEHAVAAVEA SKEKQNLLYS
501: TVSDMEDVIE DLKSKVLKAE NRADITEEKL IMVSESNAEV NEELKFFKGR LKEGEKYLQQ AEERKLRTAK DIGVHNKIMK KLVMQLAAER ERLHKQITNL
601: SRENCVLMVK LKKVGKTGYM ESGNGSEVSP KSDQNASSCH QGSRLQATFI SLTNPEEEET GSKSDIGSVR RLDVGALRFK HILVAILVIL ISSIAYVISQ
701: QNM

Arabidopsis Description

WIT1WPP domain-interacting tail-anchored protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7E5]
SUBAcon: [golgi,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.