Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45838 | Canola | cytosol, golgi, nucleus | 94.2 | 93.32 |
| CDY33569 | Canola | cytosol, golgi, peroxisome | 76.33 | 74.92 |
| AT1G68910.1 | Thale cress | cytosol | 73.51 | 74.8 |
| Bra038339.1-P | Field mustard | nucleus | 82.6 | 73.91 |
| CDX95976 | Canola | cytosol, peroxisome, plastid | 42.95 | 73.26 |
| CDX95975 | Canola | cytosol | 19.28 | 65.78 |
| KRH75191 | Soybean | cytosol | 43.26 | 40.53 |
| KRH71037 | Soybean | cytosol | 44.2 | 39.83 |
| VIT_01s0010g00750.t01 | Wine grape | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 43.26 | 37.55 |
| PGSC0003DMT400050565 | Potato | cytosol, golgi, nucleus | 38.56 | 35.04 |
| Solyc05g010590.2.1 | Tomato | nucleus | 37.77 | 34.33 |
| GSMUA_Achr1P19080_001 | Banana | nucleus | 31.35 | 33.22 |
| GSMUA_Achr7P06030_001 | Banana | cytosol, golgi, nucleus | 33.86 | 32.53 |
| CDX69762 | Canola | nucleus | 31.03 | 30.23 |
| CDX97101 | Canola | cytosol, golgi, nucleus | 30.41 | 29.39 |
| HORVU3Hr1G057330.1 | Barley | cytosol | 30.41 | 29.17 |
| Os05t0241000-01 | Rice | nucleus | 30.25 | 28.85 |
| KXG21620 | Sorghum | cytosol | 29.15 | 28.75 |
| TraesCS3A01G158400.1 | Wheat | cytosol | 29.47 | 27.93 |
| Os01t0235350-00 | Rice | cytosol | 30.56 | 27.86 |
| TraesCSU01G064900.1 | Wheat | cytosol | 29.47 | 27.57 |
| TraesCS7A01G042800.1 | Wheat | cytosol | 29.15 | 27.35 |
| Zm00001d039272_P003 | Maize | cytosol | 27.74 | 27.11 |
| TraesCS7D01G038700.1 | Wheat | cytosol | 28.53 | 26.76 |
| TraesCS3D01G166100.1 | Wheat | cytosol | 27.27 | 26.61 |
| OQU86053 | Sorghum | cytosol, golgi, nucleus | 27.59 | 26.43 |
| HORVU7Hr1G007940.7 | Barley | mitochondrion | 28.68 | 25.28 |
| Zm00001d010047_P001 | Maize | plastid | 28.68 | 24.43 |
Protein Annotations
| EnsemblPlants:CDX81573 | EnsemblPlantsGene:GSBRNA2T00135294001 | GO:A0A078D2Q2 | ncoils:Coil | PANTHER:PTHR35705 | PANTHER:PTHR35705:SF2 |
| ProteinID:CDX81573 | ProteinID:CDX81573.1 | SEG:seg | SUPFAM:SSF57997 | TMHMM:TMhelix | UniParc:UPI0004EE65F4 |
| MapMan:20.4.2.2 | : | : | : | : | : |
Description
BnaC02g18770D
Coordinates
chrLK031825:-:1662852..1665658
Molecular Weight (calculated)
72617.2 Da
IEP (calculated)
4.565
GRAVY (calculated)
-0.537
Length
638 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEIVQEDVY NHGEASSSSR SEEEQGIEGL LTKLEMDSAY TSEKLLNLHV LLMHLLAWDN DLEGVGTLDS SAASFEKALT FDLLCGILES EVKEVDEVLD
101: ELEAQIVDTS YKLSICKHPN SIFMEGKLGE SAESLKQSRG QVSEITLQLA QLRRTLHYIR NGSMGYFGSG QYLRQKYVLR PSDLRHKNAL RMLEKSLARE
201: LELEKKLIEF QQNEEELKLK LHYTEEVSSR MEEASEFIWG QFLEAENSSE VLMGISKELV GRLQIIKLSQ NGSAQRESEL KAKLEDLTVQ LEGKDLLVQK
301: LEGTIAENRE MVSEVLTLRE QVKSAEEKLE KTETELKSVN ASKQEVLLHL AETEDANESI KESLFEAESR AESGEAKIKE VDAANLELTE ELNFLKDADD
401: KKTKKVSSIE KQLRELEFQL QKSKVSSEAS QEQQNMLYTA IWDMETLIED LKSKASKAES RTETVEEKCV VVSTANSVLN KEVILLRQRA KSLEASLELA
501: NDEKEKNAQE ITVRNKLLMD MVMQLSSERE RIQEQLYSLA KENEKLRVNQ CSMGSKFQRN KTYAGDKELP FNAESLQAGI HYKNAMEEPE TDVEPEDHYA
601: SEKSSMNTEI RRAPNLRRIL VLALAFVLSF ILCFGVFY
101: ELEAQIVDTS YKLSICKHPN SIFMEGKLGE SAESLKQSRG QVSEITLQLA QLRRTLHYIR NGSMGYFGSG QYLRQKYVLR PSDLRHKNAL RMLEKSLARE
201: LELEKKLIEF QQNEEELKLK LHYTEEVSSR MEEASEFIWG QFLEAENSSE VLMGISKELV GRLQIIKLSQ NGSAQRESEL KAKLEDLTVQ LEGKDLLVQK
301: LEGTIAENRE MVSEVLTLRE QVKSAEEKLE KTETELKSVN ASKQEVLLHL AETEDANESI KESLFEAESR AESGEAKIKE VDAANLELTE ELNFLKDADD
401: KKTKKVSSIE KQLRELEFQL QKSKVSSEAS QEQQNMLYTA IWDMETLIED LKSKASKAES RTETVEEKCV VVSTANSVLN KEVILLRQRA KSLEASLELA
501: NDEKEKNAQE ITVRNKLLMD MVMQLSSERE RIQEQLYSLA KENEKLRVNQ CSMGSKFQRN KTYAGDKELP FNAESLQAGI HYKNAMEEPE TDVEPEDHYA
601: SEKSSMNTEI RRAPNLRRIL VLALAFVLSF ILCFGVFY
001: MEEIIREDYF EALSSRNEEE QEMLRMLTKL EIDSAYTSEK LMNLHVLLMH LLAWDNDLEG MGTLDSSPAS FEKALTFDLL CGILESEVKE VDEVLDVLEA
101: QIVDTSYKIS SCKHGNYIVI EGKLGESAES LKQSRGQVSE ITLQLAQLRR TLHYIRNGTS ENEESVELRQ KYALKPSDLR HKNALRMLEK SLSRELELEK
201: KLMEFQQNEE QLKLKLHYTE EVSSRMEEAS EFIWGRFLEA DNSSEVLTGI SKELVGRLQI LQFSLNGSAQ RESELKSKLE DCTVQLEAKD LLVQKLEGTI
301: SENSEIVSEV LTLREYVKSA EQKLKNTDLE LKSVNASKQE ILVHLAEMEN ANESVKENLF EAESRAESGE AKIKELDAAN LELTEELNFL KDADDKKTKK
401: VNSLEKQVRE LEVQVQNSKV SSEANQEQQN MLYSAIWDME TLIEDLKSKA SKAESRTETV EEQCIVLSTT NSELNKDVSF LRQKAKSLEA MLDLANNEKE
501: RYAQEITTRN KVLMDMMLQL SSERERIQEQ LYSLAKENKI LRVNQCSNTY QRNGSYAGDK ELSFHADGHE IEALAESLQE DERTREEPEK QSVSEKSSEI
601: RRAIKLKHIL VVALVFVLFC SFFGVTY
101: QIVDTSYKIS SCKHGNYIVI EGKLGESAES LKQSRGQVSE ITLQLAQLRR TLHYIRNGTS ENEESVELRQ KYALKPSDLR HKNALRMLEK SLSRELELEK
201: KLMEFQQNEE QLKLKLHYTE EVSSRMEEAS EFIWGRFLEA DNSSEVLTGI SKELVGRLQI LQFSLNGSAQ RESELKSKLE DCTVQLEAKD LLVQKLEGTI
301: SENSEIVSEV LTLREYVKSA EQKLKNTDLE LKSVNASKQE ILVHLAEMEN ANESVKENLF EAESRAESGE AKIKELDAAN LELTEELNFL KDADDKKTKK
401: VNSLEKQVRE LEVQVQNSKV SSEANQEQQN MLYSAIWDME TLIEDLKSKA SKAESRTETV EEQCIVLSTT NSELNKDVSF LRQKAKSLEA MLDLANNEKE
501: RYAQEITTRN KVLMDMMLQL SSERERIQEQ LYSLAKENKI LRVNQCSNTY QRNGSYAGDK ELSFHADGHE IEALAESLQE DERTREEPEK QSVSEKSSEI
601: RRAIKLKHIL VVALVFVLFC SFFGVTY
Arabidopsis Description
WIT2WPP domain-interacting tail-anchored protein 2 [Source:UniProtKB/Swiss-Prot;Acc:A8MQR0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.