CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER96942
EER97479
EES05430
EES05435
EES07543
EES14314
KXG21620
KXG39905
OQU81760
OQU86053

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G11390.1	EES05430	AT3G63130.1	18591351
AT5G11390.1	EES05435	AT3G63130.1	18591351
AT5G11390.1	EES07543	AT3G63130.1	18591351
AT5G11390.1	EER96942	AT4G26455.1	18591351
AT5G11390.1	EES14314	AT4G26455.1	18591351
AT5G11390.1	OQU81760	AT4G26455.1	18591351
AT5G11390.1	KXG21620	AT5G11390.1	18591351
AT5G11390.1	OQU86053	AT5G11390.1	18591351
AT5G11390.1	EES05430	AT5G19320.1	18591351
AT5G11390.1	EES05435	AT5G19320.1	18591351
AT5G11390.1	EES07543	AT5G19320.1	18591351
AT5G11390.1	EER97479	AT5G27940.1	18591351
AT5G11390.1	KXG39905	AT5G27940.1	18591351

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010047_P001	Maize	plastid	77.59	67.02
Os05t0241000-01	Rice	nucleus	60.74	58.74
TraesCSU01G064900.1	Wheat	cytosol	57.81	54.84
TraesCS7A01G042800.1	Wheat	cytosol	57.19	54.41
TraesCS7D01G038700.1	Wheat	cytosol	56.72	53.97
HORVU7Hr1G007940.7	Barley	mitochondrion	58.11	51.93
OQU86053	Sorghum	cytosol, golgi, nucleus	47.6	46.25
GSMUA_Achr1P19080_001	Banana	nucleus	42.35	45.51
GSMUA_Achr7P06030_001	Banana	cytosol, golgi, nucleus	42.35	41.27
KRH18315	Soybean	nucleus	29.83	34.65
VIT_14s0083g00730.t01	Wine grape	nucleus	38.18	34.59
KRG93747	Soybean	nucleus	29.37	34.55
Solyc02g065660.2.1	Tomato	nucleus, plastid	32.77	33.87
PGSC0003DMT400068312	Potato	cytosol, golgi, nucleus	35.09	33.19
KRH01441	Soybean	cytosol	33.08	32.92
AT1G68910.1	Thale cress	cytosol	29.68	30.62
CDX95976	Canola	cytosol, peroxisome, plastid	17.62	30.48
AT5G11390.1	Thale cress	cytosol, golgi, nucleus	32.61	30.01
KRH75191	Soybean	cytosol	31.53	29.96
Bra004347.1-P	Field mustard	cytosol	30.91	29.81
VIT_01s0010g00750.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	33.38	29.39
KRH71037	Soybean	cytosol	31.99	29.24
CDY33569	Canola	cytosol, golgi, peroxisome	29.37	29.23
CDX81573	Canola	cytosol	28.75	29.15
CDY45838	Canola	cytosol, golgi, nucleus	28.9	29.04
CDX69762	Canola	nucleus	29.37	29.01
Bra008966.1-P	Field mustard	nucleus	29.37	28.96
Solyc05g010590.2.1	Tomato	nucleus	30.76	28.35
CDX97101	Canola	cytosol, golgi, nucleus	28.9	28.33
PGSC0003DMT400050565	Potato	cytosol, golgi, nucleus	29.83	27.49
Bra038339.1-P	Field mustard	nucleus	29.37	26.65
CDX95975	Canola	cytosol	6.34	21.93

Protein Annotations

EnsemblPlants:KXG21620	EnsemblPlantsGene:SORBI_3009G088000	ncoils:Coil	PANTHER:PTHR35705	PANTHER:PTHR35705:SF6	ProteinID:KXG21620
ProteinID:KXG21620.1	SEG:seg	SUPFAM:SSF57997	UniParc:UPI00081ABB56	UniProt:A0A1B6P7D3	MapMan:20.4.2.2

Description

hypothetical protein

Coordinates

chr9:-:15107180..15110916

Molecular Weight (calculated)

72473.9 Da

IEP (calculated)

4.562

GRAVY (calculated)

-0.479

Length

647 amino acids

Sequence
(BLAST)

001: MDTMIYKHDD ISQERTPPFG DAVNMGGSNV EILTRVEVDM AFASEKLLNL EMLVMEIARQ ATDFDPATLE DESISSETAE NAFELDILYG ILDAEVKELH
101: NLISSLQADI KSIEHQDYEE ESGGKVKARM DAVKLSLKQM QELIADIRNE SAKFEKVIAF PHDKEGTIEA AGCDNGHLSY QNGTQTEEQH RNVLHMLEKS
201: IASELDLEKK LSDSISVIED LRLKLHHQEE EIYFLEESTE TVSGRLFEAE NASELLFGTS KELIDRLNNM QFHVSALKCT EDDLKSKLEQ SLTKSSFLEN
301: SPDKVEKESD KVGAGSPSLQ DKIQELEKQL NESNLQLQLA LASAETRQEE QNALQSELST MENTIKNIKD DVSRAESRAQ NAEIRCMQLT VANIELNGEL
401: DALKSEKSDK ANLLEKKLTE SNTQLEHAKA AVDAIVEQQG MLKCTMSDME HIIEDLKGKV SKAETRAESA ESKCTLLTDT NLELSEELAF LRGRVESLEN
501: LLREANHAKV STAKDIGVRT KIITDLVIKL ALERERLHLQ IATLTKKNKM LVKKCKEDIN GSIQMSKKAT SNRTEFQSTQ KAEEICPDSL PSQTVVTTCH
601: MTQYLLPSRI QETKCCNRSC WIVINIDLVW PGLCLSLSTA QAELGFG

Best Arabidopsis Sequence Match ( AT5G11390.1 )
(BLAST)

001: METETEHDRT VSVDDNDSLV PEPSSTKESF FEDLSLTGQV MNPQLSSAGE VLTKVELDFA FVSEKLVNLS LLTMQLGTRE NDFESFVSKK EEDEEEPSSN
101: VDDDDDSAEK ALEFDLLSSI LNSEVKELES LLGFLQNEIQ SARVMISPFQ HDGEAFLDLE GKLNDTEQSL GQLMEQVVEM KKQSSNFQRL SSGLDEQGSW
201: SGGQTSVSQN DGEFGDLSAK INMQTADQQR NVLRMLEKSL AKEMELEKKL SESRNTEREL EMKLYSSEQD VVYMEEVTED AFSRWLEADN AAEVFKGTSK
301: EMSGKLQILQ FNLSGSFKRE DNLKSKLVDS KERLEAKECA LHKLDSSNAR LADFLVAQTE GLKESLQEAE EKLILLNTEN STLSEKVSSL EEQLNEYGIQ
401: TEDADATSGA LITDLERINE ELKDKLAKTE ARAEETESKC KILEESKKEL QDELGNFRDK GFTIHKLASL EKHLRDSDLQ LEHAVAAVEA SKEKQNLLYS
501: TVSDMEDVIE DLKSKVLKAE NRADITEEKL IMVSESNAEV NEELKFFKGR LKEGEKYLQQ AEERKLRTAK DIGVHNKIMK KLVMQLAAER ERLHKQITNL
601: SRENCVLMVK LKKVGKTGYM ESGNGSEVSP KSDQNASSCH QGSRLQATFI SLTNPEEEET GSKSDIGSVR RLDVGALRFK HILVAILVIL ISSIAYVISQ
701: QNM

Arabidopsis Description

WIT1WPP domain-interacting tail-anchored protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7E5]
SUBAcon: [golgi,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.