CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81573	Canola	cytosol	93.32	94.2
Bra038339.1-P	Field mustard	nucleus	85.09	76.86
CDY33569	Canola	cytosol, golgi, peroxisome	76.71	76.0
AT1G68910.1	Thale cress	cytosol	72.83	74.8
CDX95976	Canola	cytosol, peroxisome, plastid	42.39	72.99
CDX95975	Canola	cytosol	19.41	66.84
KRH75191	Soybean	cytosol	42.7	40.38
KRH71037	Soybean	cytosol	43.48	39.55
VIT_01s0010g00750.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	43.17	37.82
PGSC0003DMT400050565	Potato	cytosol, golgi, nucleus	38.98	35.76
Solyc05g010590.2.1	Tomato	nucleus	38.35	35.19
GSMUA_Achr1P19080_001	Banana	nucleus	31.83	34.05
GSMUA_Achr7P06030_001	Banana	cytosol, golgi, nucleus	34.16	33.13
CDX69762	Canola	nucleus	31.06	30.53
CDX97101	Canola	cytosol, golgi, nucleus	30.43	29.7
HORVU3Hr1G057330.1	Barley	cytosol	30.43	29.47
KXG21620	Sorghum	cytosol	29.04	28.9
Os05t0241000-01	Rice	nucleus	29.97	28.85
Os01t0235350-00	Rice	cytosol	31.06	28.57
TraesCS3A01G158400.1	Wheat	cytosol	29.81	28.53
Zm00001d039272_P003	Maize	cytosol	28.26	27.87
TraesCSU01G064900.1	Wheat	cytosol	29.35	27.71
TraesCS7A01G042800.1	Wheat	cytosol	29.04	27.5
TraesCS3D01G166100.1	Wheat	cytosol	27.8	27.37
OQU86053	Sorghum	cytosol, golgi, nucleus	28.11	27.18
TraesCS7D01G038700.1	Wheat	cytosol	28.42	26.91
HORVU7Hr1G007940.7	Barley	mitochondrion	28.57	25.41
Zm00001d010047_P001	Maize	plastid	28.26	24.3

Protein Annotations

EnsemblPlants:CDY45838	EnsemblPlantsGene:GSBRNA2T00082781001	GO:A0A078I9M0	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
ncoils:Coil	PANTHER:PTHR35705	PANTHER:PTHR35705:SF2	ProteinID:CDY45838	ProteinID:CDY45838.1	SEG:seg
SUPFAM:SSF57997	TMHMM:TMhelix	UniParc:UPI0004EEC2D1	UniProt:A0A078I9M0	MapMan:20.4.2.2	:

Description

BnaA02g14150DBnaA02g14150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I9M0]

Coordinates

chrLK032638:+:46290..48756

Molecular Weight (calculated)

73238.4 Da

IEP (calculated)

4.509

GRAVY (calculated)

-0.594

Length

644 amino acids

Sequence
(BLAST)

001: MEEIVQEDVR NHGEASSSSR SEEEQGIEGM LAKLEMDSAY TSEKLLNLHV LLMHLLAWDN DLERVGTLDS SAASFEKALT FDLLCGILES EVKEVDEILD
101: ELEAQIVDAS YKLSTCKHSN SIFMEGKLGE SADSLKQSRG QVSEINLQLA QLRRTLHYIR NGTSENEESV GYSGHGEDLR QKNALRPSDL RHKNALRMLE
201: KSLARELELD KKLIEFQQNE EELKLKLHYT EEVSSRMEEA SEFIWGQFLE AENSSEVLMG ISKELVGRLQ SIQFSQNGSA QRESELKAKL EDLTVQLEGK
301: DLLVQNLEGT IAENREMVSE VLTLREQVKS AEEKLEKTES ELKSVNASKQ EVLLHLAEME NANESIKESL FEAESRAESG EAKIKEVDAA NLELTEELNF
401: LKDADEKKTK KVSSLEKQVR ELEFQLQNSK VSSEASQEQQ NMLYTAIWDM ETLIEDLKSK ASKAESRTET VEEKCVVVST ANSVLNKEVI LLRQRAKYLE
501: ASLELANDEK EKNAQEITVR NKLLMDMVMQ LSSERERIQE QLYSLAKENE KLRVNQCSMG SKFQRNKTYA GDKELPFNAE SLQAGIHYKN AMEEPETDVE
601: PEDHYASEKS SMNTEIRRAP NLRRILVLAL AFVLSFILCF GVFY

Best Arabidopsis Sequence Match ( AT1G68910.1 )
(BLAST)

001: MEEIIREDYF EALSSRNEEE QEMLRMLTKL EIDSAYTSEK LMNLHVLLMH LLAWDNDLEG MGTLDSSPAS FEKALTFDLL CGILESEVKE VDEVLDVLEA
101: QIVDTSYKIS SCKHGNYIVI EGKLGESAES LKQSRGQVSE ITLQLAQLRR TLHYIRNGTS ENEESVELRQ KYALKPSDLR HKNALRMLEK SLSRELELEK
201: KLMEFQQNEE QLKLKLHYTE EVSSRMEEAS EFIWGRFLEA DNSSEVLTGI SKELVGRLQI LQFSLNGSAQ RESELKSKLE DCTVQLEAKD LLVQKLEGTI
301: SENSEIVSEV LTLREYVKSA EQKLKNTDLE LKSVNASKQE ILVHLAEMEN ANESVKENLF EAESRAESGE AKIKELDAAN LELTEELNFL KDADDKKTKK
401: VNSLEKQVRE LEVQVQNSKV SSEANQEQQN MLYSAIWDME TLIEDLKSKA SKAESRTETV EEQCIVLSTT NSELNKDVSF LRQKAKSLEA MLDLANNEKE
501: RYAQEITTRN KVLMDMMLQL SSERERIQEQ LYSLAKENKI LRVNQCSNTY QRNGSYAGDK ELSFHADGHE IEALAESLQE DERTREEPEK QSVSEKSSEI
601: RRAIKLKHIL VVALVFVLFC SFFGVTY

Arabidopsis Description

WIT2WPP domain-interacting tail-anchored protein 2 [Source:UniProtKB/Swiss-Prot;Acc:A8MQR0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.