CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33569	Canola	cytosol, golgi, peroxisome	90.91	52.31
Bra004347.1-P	Field mustard	cytosol	80.48	44.86
CDX81573	Canola	cytosol	73.26	42.95
CDY45838	Canola	cytosol, golgi, nucleus	72.99	42.39
AT1G68910.1	Thale cress	cytosol	70.32	41.95
KRH75191	Soybean	cytosol	43.32	23.79
VIT_01s0010g00750.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	45.45	23.13
KRH71037	Soybean	cytosol	43.05	22.74
PGSC0003DMT400050565	Potato	cytosol, golgi, nucleus	40.64	21.65
Solyc05g010590.2.1	Tomato	nucleus	39.84	21.23
GSMUA_Achr1P19080_001	Banana	nucleus	29.68	18.44
CDX69762	Canola	nucleus	31.55	18.02
HORVU3Hr1G057330.1	Barley	cytosol	31.55	17.74
CDX97101	Canola	cytosol, golgi, nucleus	31.28	17.73
KXG21620	Sorghum	cytosol	30.48	17.62
Os05t0241000-01	Rice	nucleus	31.28	17.49
GSMUA_Achr7P06030_001	Banana	cytosol, golgi, nucleus	30.75	17.32
Zm00001d039272_P003	Maize	cytosol	30.21	17.3
Os01t0235350-00	Rice	cytosol	32.35	17.29
TraesCSU01G064900.1	Wheat	cytosol	31.28	17.16
TraesCS7A01G042800.1	Wheat	cytosol	31.02	17.06
TraesCS3D01G166100.1	Wheat	cytosol	29.68	16.97
OQU86053	Sorghum	cytosol, golgi, nucleus	29.95	16.82
TraesCS3A01G158400.1	Wheat	cytosol	30.21	16.79
TraesCS7D01G038700.1	Wheat	cytosol	30.48	16.76
HORVU7Hr1G007940.7	Barley	mitochondrion	31.02	16.02
Zm00001d010047_P001	Maize	plastid	30.75	15.35
CDX95975	Canola	cytosol	0.27	0.53

Protein Annotations

EnsemblPlants:CDX95976	EnsemblPlantsGene:GSBRNA2T00101996001	GO:A0A078E3P6	ncoils:Coil	PANTHER:PTHR35705	PANTHER:PTHR35705:SF2
ProteinID:CDX95976	ProteinID:CDX95976.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE82C7	MapMan:20.4.2.2

Description

BnaA07g27550D

Coordinates

chrLK031892:+:377706..379225

Molecular Weight (calculated)

42368.5 Da

IEP (calculated)

4.818

GRAVY (calculated)

-0.549

Length

374 amino acids

Sequence
(BLAST)

001: MGVSKELVGR LQIIQFSQSW SAQREAELKS KLEDITAQLQ VKDLEVKKLE GTIQENQEIV SEVLTLREHV KLTEQKLKDT EIELKSVNAS KQEVLAESRA
101: ESGETKIKEL TAANLELTEE LSFLKDADDK KTKKVSSLEK QLRELEFQLQ NSKVLSEASQ EQQNMLYSAI WDMETLIEDL KSKASKAESR TETVEEQCIV
201: LSTTNSVLNK EVTSLRQRTK SLEASLDLAK EEKEKYAQEI ATRNKLLMDM VMQLSSERER IKEQLYSLAK ENEKLRVNQC SEGGKYQRNG TYAGDKELLS
301: NTDGGGIEAF AESLQTEPET KVEPEFLSES EKSSMNTEIR RASKLRCIPV FAAAFVLFLS FFVLAFVKGK IISV

Best Arabidopsis Sequence Match ( AT1G68910.1 )
(BLAST)

001: MEEIIREDYF EALSSRNEEE QEMLRMLTKL EIDSAYTSEK LMNLHVLLMH LLAWDNDLEG MGTLDSSPAS FEKALTFDLL CGILESEVKE VDEVLDVLEA
101: QIVDTSYKIS SCKHGNYIVI EGKLGESAES LKQSRGQVSE ITLQLAQLRR TLHYIRNGTS ENEESVELRQ KYALKPSDLR HKNALRMLEK SLSRELELEK
201: KLMEFQQNEE QLKLKLHYTE EVSSRMEEAS EFIWGRFLEA DNSSEVLTGI SKELVGRLQI LQFSLNGSAQ RESELKSKLE DCTVQLEAKD LLVQKLEGTI
301: SENSEIVSEV LTLREYVKSA EQKLKNTDLE LKSVNASKQE ILVHLAEMEN ANESVKENLF EAESRAESGE AKIKELDAAN LELTEELNFL KDADDKKTKK
401: VNSLEKQVRE LEVQVQNSKV SSEANQEQQN MLYSAIWDME TLIEDLKSKA SKAESRTETV EEQCIVLSTT NSELNKDVSF LRQKAKSLEA MLDLANNEKE
501: RYAQEITTRN KVLMDMMLQL SSERERIQEQ LYSLAKENKI LRVNQCSNTY QRNGSYAGDK ELSFHADGHE IEALAESLQE DERTREEPEK QSVSEKSSEI
601: RRAIKLKHIL VVALVFVLFC SFFGVTY

Arabidopsis Description

WIT2WPP domain-interacting tail-anchored protein 2 [Source:UniProtKB/Swiss-Prot;Acc:A8MQR0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.