CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004347.1-P	Field mustard	cytosol	93.58	26.08
CDY33569	Canola	cytosol, golgi, peroxisome	88.24	25.38
AT1G68910.1	Thale cress	cytosol	65.78	19.62
CDY45838	Canola	cytosol, golgi, nucleus	66.84	19.41
CDX81573	Canola	cytosol	65.78	19.28
VIT_01s0010g00750.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	34.22	8.71
KRH75191	Soybean	cytosol	31.55	8.66
KRH71037	Soybean	cytosol	32.62	8.62
GSMUA_Achr1P19080_001	Banana	nucleus	26.74	8.31
HORVU3Hr1G057330.1	Barley	cytosol	26.74	7.52
GSMUA_Achr7P06030_001	Banana	cytosol, golgi, nucleus	26.2	7.38
Solyc05g010590.2.1	Tomato	nucleus	27.27	7.26
PGSC0003DMT400050565	Potato	cytosol, golgi, nucleus	27.27	7.26
CDX69762	Canola	nucleus	24.6	7.02
CDX97101	Canola	cytosol, golgi, nucleus	24.6	6.97
Zm00001d039272_P003	Maize	cytosol	24.06	6.89
TraesCS3D01G166100.1	Wheat	cytosol	24.06	6.88
TraesCS3A01G158400.1	Wheat	cytosol	24.6	6.84
Os01t0235350-00	Rice	cytosol	25.13	6.71
TraesCS7A01G042800.1	Wheat	cytosol	24.06	6.62
OQU86053	Sorghum	cytosol, golgi, nucleus	23.53	6.61
TraesCSU01G064900.1	Wheat	cytosol	24.06	6.6
KXG21620	Sorghum	cytosol	21.93	6.34
TraesCS7D01G038700.1	Wheat	cytosol	22.99	6.32
HORVU7Hr1G007940.7	Barley	mitochondrion	24.06	6.22
Os05t0241000-01	Rice	nucleus	21.93	6.13
Zm00001d010047_P001	Maize	plastid	21.39	5.34
CDX95976	Canola	cytosol, peroxisome, plastid	0.53	0.27

Protein Annotations

EnsemblPlants:CDX95975	EnsemblPlantsGene:GSBRNA2T00101995001	ncoils:Coil	PANTHER:PTHR35705	PANTHER:PTHR35705:SF2	ProteinID:CDX95975
ProteinID:CDX95975.1	SEG:seg	UniParc:UPI0004EF4AC3	MapMan:20.4.2.2	:	:

Description

BnaA07g27560D

Coordinates

chrLK031892:+:376733..377638

Molecular Weight (calculated)

20806.5 Da

IEP (calculated)

4.235

GRAVY (calculated)

-0.328

Length

187 amino acids

Sequence
(BLAST)

001: MEEISQEDVY NHGEEALSSM SEEEQAREGM FKILTKLEID SAYTSEKLLN LHVLLMHLLA WDNDLEGMGT LGSSPASFEK ALTFDLLCGI LESELKGVDE
101: VLDELEAQIV DTSYKLSACK QVDYSVMEGK LAESAESLKQ SRGQVSEITL QLAQLRRTLH YIRHGTSENE ESAEYSGNAA LHGRGIF

Best Arabidopsis Sequence Match ( AT1G68910.1 )
(BLAST)

001: MEEIIREDYF EALSSRNEEE QEMLRMLTKL EIDSAYTSEK LMNLHVLLMH LLAWDNDLEG MGTLDSSPAS FEKALTFDLL CGILESEVKE VDEVLDVLEA
101: QIVDTSYKIS SCKHGNYIVI EGKLGESAES LKQSRGQVSE ITLQLAQLRR TLHYIRNGTS ENEESVELRQ KYALKPSDLR HKNALRMLEK SLSRELELEK
201: KLMEFQQNEE QLKLKLHYTE EVSSRMEEAS EFIWGRFLEA DNSSEVLTGI SKELVGRLQI LQFSLNGSAQ RESELKSKLE DCTVQLEAKD LLVQKLEGTI
301: SENSEIVSEV LTLREYVKSA EQKLKNTDLE LKSVNASKQE ILVHLAEMEN ANESVKENLF EAESRAESGE AKIKELDAAN LELTEELNFL KDADDKKTKK
401: VNSLEKQVRE LEVQVQNSKV SSEANQEQQN MLYSAIWDME TLIEDLKSKA SKAESRTETV EEQCIVLSTT NSELNKDVSF LRQKAKSLEA MLDLANNEKE
501: RYAQEITTRN KVLMDMMLQL SSERERIQEQ LYSLAKENKI LRVNQCSNTY QRNGSYAGDK ELSFHADGHE IEALAESLQE DERTREEPEK QSVSEKSSEI
601: RRAIKLKHIL VVALVFVLFC SFFGVTY

Arabidopsis Description

WIT2WPP domain-interacting tail-anchored protein 2 [Source:UniProtKB/Swiss-Prot;Acc:A8MQR0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.