Factsheet for PGSC0003DMT400050565

Subcellular Localization

min:

: max

Winner_takes_all: golgi, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, nucleus
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g010590.2.1	Tomato	nucleus	89.17	89.17
KRH75191	Soybean	cytosol	40.74	42.0
VIT_01s0010g00750.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	43.73	41.77
CDX95976	Canola	cytosol, peroxisome, plastid	21.65	40.64
KRH71037	Soybean	cytosol	40.74	40.4
AT1G68910.1	Thale cress	cytosol	35.76	40.03
CDY45838	Canola	cytosol, golgi, nucleus	35.76	38.98
CDX81573	Canola	cytosol	35.04	38.56
CDY33569	Canola	cytosol, golgi, peroxisome	35.61	38.46
GSMUA_Achr1P19080_001	Banana	nucleus	32.48	37.87
Bra004347.1-P	Field mustard	cytosol	35.61	37.26
GSMUA_Achr7P06030_001	Banana	cytosol, golgi, nucleus	33.05	34.94
Bra038339.1-P	Field mustard	nucleus	34.9	34.36
PGSC0003DMT400068312	Potato	cytosol, golgi, nucleus	33.33	34.21
Os05t0241000-01	Rice	nucleus	30.77	32.29
TraesCSU01G064900.1	Wheat	cytosol	29.91	30.79
TraesCS7A01G042800.1	Wheat	cytosol	29.77	30.74
TraesCS7D01G038700.1	Wheat	cytosol	29.49	30.44
KXG21620	Sorghum	cytosol	27.49	29.83
HORVU3Hr1G057330.1	Barley	cytosol	27.35	28.87
Zm00001d039272_P003	Maize	cytosol	26.5	28.48
TraesCS3A01G158400.1	Wheat	cytosol	26.92	28.08
OQU86053	Sorghum	cytosol, golgi, nucleus	26.64	28.08
HORVU7Hr1G007940.7	Barley	mitochondrion	28.77	27.9
TraesCS3D01G166100.1	Wheat	cytosol	25.93	27.83
CDX95975	Canola	cytosol	7.26	27.27
Os01t0235350-00	Rice	cytosol	26.92	27.0
Zm00001d010047_P001	Maize	plastid	27.92	26.17

Protein Annotations

EntrezGene:102604853	MapMan:20.4.2.2	ncoils:Coil	GO:GO:0005575	GO:GO:0008150	GO:GO:0009653
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:2000769	UniProt:M1BQI9
EnsemblPlantsGene:PGSC0003DMG400019651	PGSC:PGSC0003DMG400019651	EnsemblPlants:PGSC0003DMT400050565	PANTHER:PTHR35705	PANTHER:PTHR35705:SF2	SUPFAM:SSF57997
TMHMM:TMhelix	UniParc:UPI0002969727	RefSeq:XP_006348627.1	RefSeq:XP_015164782.1	RefSeq:XP_015164783.1	SEG:seg

Description

WPP domain-interacting tail-anchored protein 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400019651]

Coordinates

chr5:+:1146991..1150734

Molecular Weight (calculated)

80555.2 Da

IEP (calculated)

4.567

GRAVY (calculated)

-0.485

Length

702 amino acids

Sequence
(BLAST)

001: MAIEELAVRT SDIVDPQVME TLLIENHSSE AKDMEEMRSS MEKLSRVDLD LAYSDEKLTN LDNLLMRVLA CENEVEAISF ENDEISPESI EKVLSLDHLS
101: IILNSEIRLL DNFLGTLQDL VIEARQKIPT RREFSELHVI MENKFHDTEE LLRQSKERVL EMKIQLAKLQ MTSLAFDQNE WRHRMSLDLS DIDNVSAREL
201: KPRAQTVEQR RILRMLEKSL ERELDLEKKL TLHKQNEDDL KLKLRLTEQV ALCMEEGAEV IWGRFLESEN AAEVLMGISR EMVSRLQVVN FNLNGSLQRE
301: KDFTLKIDNC IGQINAKDIT IQNLNSNNKH LAVENTEVSS LRDKLKLSED KLKESESKLL KANELNEVSE ERLKELECIV ESQKEDIDIA EHKAESAEEK
401: VAHLTETNLE LHEELDFLKS SNENNAKKVS ILEKQVRELE LQLQNAKTSS EAGQEQQNML YTAIWDMETL IDELKQKVLK AESKTEHVEE QCLILSETNL
501: ELTQEVEFLR SRVEGLETSL NQATVEKLAS AKDINIKTSF IMDLVMQLAI ERERVQKQIF CLAKENKSLI SKLKSTKEQP SINVLENGGD DIGLSSSRVA
601: STIAAATDSC RELQTESSQK SSQVINELPH DKTTDQSSKS SVLTNEEPNI VVKTEDTEVQ LQAKQHQHRY IVMAVLVLLL STLGLYFFDK RNDILEWLMV
701: RL

Best Arabidopsis Sequence Match ( AT1G68910.2 )
(BLAST)

001: MEEIIREDYF EALSSRNEEE QEMLRMLTKL EIDSAYTSEK LMNLHVLLMH LLAWDNDLEG MGTLDSSPAS FEKALTFDLL CGILESEVKE VDEVLDVLEA
101: QIVDTSYKIS SCKHGNYIVI EGKLGESAES LKQSRGQVSE ITLQLAQLRR TLHYIRNGTS ENEESVELRQ KYALKPSDLR HKNALRMLEK SLSRELELEK
201: KLMEFQQNEE QLKLKLHYTE EVSSRMEEAS EFIWGRFLEA DNSSEVLTGI SKELVGRLQI LQFSLNGSAQ RESELKSKLE DCTVQLEAKD LLVQKLEGTI
301: SENSEIVSEV LTLREYVKSA EQKLKNTDLE LKSVNASKQE ILVHLAEMEN ANESVKENLF EAESRAESGE AKIKELDAAN LELTEELNFL KDADDKKTKK
401: VNSLEKQVRE LEVQVQNSKV SSEANQEQQN MLYSAIWDME TLIEDLKSKA SKAESRTETV EEQCIVLSTT NSELNKDVSF LRQKAKSLEA MLDLANNEKE
501: RYAQEITTRN KVLMDMMLQL SSERERIQEQ LYSLAKENKI LRVNQCSNTY QRNGSYAGDK ELSFHADGHE IEALAESLQA GG

Arabidopsis Description

WIT2WPP domain-interacting tail-anchored protein 2 [Source:UniProtKB/Swiss-Prot;Acc:A8MQR0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.