Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33569 | Canola | cytosol, golgi, peroxisome | 76.4 | 73.69 |
| CDX81573 | Canola | cytosol | 74.8 | 73.51 |
| CDY45838 | Canola | cytosol, golgi, nucleus | 74.8 | 72.83 |
| CDX95976 | Canola | cytosol, peroxisome, plastid | 41.95 | 70.32 |
| Bra004347.1-P | Field mustard | cytosol | 74.48 | 69.6 |
| CDX95975 | Canola | cytosol | 19.62 | 65.78 |
| Bra038339.1-P | Field mustard | nucleus | 72.25 | 63.53 |
| KRH75191 | Soybean | cytosol | 44.98 | 41.41 |
| KRH71037 | Soybean | cytosol | 44.98 | 39.83 |
| VIT_01s0010g00750.t01 | Wine grape | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 45.14 | 38.5 |
| PGSC0003DMT400050565 | Potato | cytosol, golgi, nucleus | 40.03 | 35.76 |
| Solyc05g010590.2.1 | Tomato | nucleus | 39.55 | 35.33 |
| GSMUA_Achr1P19080_001 | Banana | nucleus | 33.33 | 34.72 |
| GSMUA_Achr7P06030_001 | Banana | cytosol, golgi, nucleus | 33.33 | 31.48 |
| AT5G11390.1 | Thale cress | cytosol, golgi, nucleus | 35.25 | 31.44 |
| Os05t0241000-01 | Rice | nucleus | 32.38 | 30.34 |
| KXG21620 | Sorghum | cytosol | 30.62 | 29.68 |
| HORVU3Hr1G057330.1 | Barley | cytosol | 31.26 | 29.47 |
| TraesCS3A01G158400.1 | Wheat | cytosol | 30.3 | 28.23 |
| TraesCSU01G064900.1 | Wheat | cytosol | 30.62 | 28.15 |
| Zm00001d039272_P003 | Maize | cytosol | 29.19 | 28.02 |
| Os01t0235350-00 | Rice | cytosol | 31.26 | 28.0 |
| TraesCS7A01G042800.1 | Wheat | cytosol | 30.3 | 27.94 |
| TraesCS7D01G038700.1 | Wheat | cytosol | 29.98 | 27.65 |
| OQU86053 | Sorghum | cytosol, golgi, nucleus | 29.35 | 27.63 |
| TraesCS3D01G166100.1 | Wheat | cytosol | 28.23 | 27.06 |
| HORVU7Hr1G007940.7 | Barley | mitochondrion | 30.3 | 26.24 |
| Zm00001d010047_P001 | Maize | plastid | 29.51 | 24.7 |
Protein Annotations
| MapMan:20.4.2.2 | EntrezGene:843224 | UniProt:A8MQR0 | ProteinID:AAG51595.1 | ProteinID:AEE34858.1 | ProteinID:AEE34859.1 |
| ProteinID:AEE34860.1 | ArrayExpress:AT1G68910 | EnsemblPlantsGene:AT1G68910 | RefSeq:AT1G68910 | TAIR:AT1G68910 | RefSeq:AT1G68910-TAIR-G |
| EnsemblPlants:AT1G68910.1 | TAIR:AT1G68910.1 | Unigene:At.35468 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016043 | GO:GO:2000769 | RefSeq:NP_001077797.1 | RefSeq:NP_001185353.1 | RefSeq:NP_177057.2 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR35705 | PANTHER:PTHR35705:SF2 | SUPFAM:SSF57997 | TMHMM:TMhelix | UniParc:UPI000019714F | Symbol:WIT2 |
| SEG:seg | : | : | : | : | : |
Description
WIT2WPP domain-interacting tail-anchored protein 2 [Source:UniProtKB/Swiss-Prot;Acc:A8MQR0]
Coordinates
chr1:-:25908131..25911108
Molecular Weight (calculated)
71856.1 Da
IEP (calculated)
4.543
GRAVY (calculated)
-0.577
Length
627 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEIIREDYF EALSSRNEEE QEMLRMLTKL EIDSAYTSEK LMNLHVLLMH LLAWDNDLEG MGTLDSSPAS FEKALTFDLL CGILESEVKE VDEVLDVLEA
101: QIVDTSYKIS SCKHGNYIVI EGKLGESAES LKQSRGQVSE ITLQLAQLRR TLHYIRNGTS ENEESVELRQ KYALKPSDLR HKNALRMLEK SLSRELELEK
201: KLMEFQQNEE QLKLKLHYTE EVSSRMEEAS EFIWGRFLEA DNSSEVLTGI SKELVGRLQI LQFSLNGSAQ RESELKSKLE DCTVQLEAKD LLVQKLEGTI
301: SENSEIVSEV LTLREYVKSA EQKLKNTDLE LKSVNASKQE ILVHLAEMEN ANESVKENLF EAESRAESGE AKIKELDAAN LELTEELNFL KDADDKKTKK
401: VNSLEKQVRE LEVQVQNSKV SSEANQEQQN MLYSAIWDME TLIEDLKSKA SKAESRTETV EEQCIVLSTT NSELNKDVSF LRQKAKSLEA MLDLANNEKE
501: RYAQEITTRN KVLMDMMLQL SSERERIQEQ LYSLAKENKI LRVNQCSNTY QRNGSYAGDK ELSFHADGHE IEALAESLQE DERTREEPEK QSVSEKSSEI
601: RRAIKLKHIL VVALVFVLFC SFFGVTY
101: QIVDTSYKIS SCKHGNYIVI EGKLGESAES LKQSRGQVSE ITLQLAQLRR TLHYIRNGTS ENEESVELRQ KYALKPSDLR HKNALRMLEK SLSRELELEK
201: KLMEFQQNEE QLKLKLHYTE EVSSRMEEAS EFIWGRFLEA DNSSEVLTGI SKELVGRLQI LQFSLNGSAQ RESELKSKLE DCTVQLEAKD LLVQKLEGTI
301: SENSEIVSEV LTLREYVKSA EQKLKNTDLE LKSVNASKQE ILVHLAEMEN ANESVKENLF EAESRAESGE AKIKELDAAN LELTEELNFL KDADDKKTKK
401: VNSLEKQVRE LEVQVQNSKV SSEANQEQQN MLYSAIWDME TLIEDLKSKA SKAESRTETV EEQCIVLSTT NSELNKDVSF LRQKAKSLEA MLDLANNEKE
501: RYAQEITTRN KVLMDMMLQL SSERERIQEQ LYSLAKENKI LRVNQCSNTY QRNGSYAGDK ELSFHADGHE IEALAESLQE DERTREEPEK QSVSEKSSEI
601: RRAIKLKHIL VVALVFVLFC SFFGVTY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.