Subcellular Localization
min:
: max
Winner_takes_all: golgi, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008966.1-P | Field mustard | nucleus | 68.85 | 73.78 |
| CDX69762 | Canola | nucleus | 68.42 | 73.44 |
| CDX97101 | Canola | cytosol, golgi, nucleus | 67.99 | 72.42 |
| VIT_14s0083g00730.t01 | Wine grape | nucleus | 46.8 | 46.08 |
| KRG93747 | Soybean | nucleus | 32.86 | 42.0 |
| KRH01441 | Soybean | cytosol | 37.84 | 40.92 |
| GSMUA_Achr1P19080_001 | Banana | nucleus | 34.57 | 40.37 |
| KRH18315 | Soybean | nucleus | 31.86 | 40.22 |
| Solyc02g065660.2.1 | Tomato | nucleus, plastid | 35.14 | 39.46 |
| PGSC0003DMT400068312 | Potato | cytosol, golgi, nucleus | 38.26 | 39.33 |
| AT1G68910.1 | Thale cress | cytosol | 31.44 | 35.25 |
| GSMUA_Achr7P06030_001 | Banana | cytosol, golgi, nucleus | 33.0 | 34.94 |
| Os05t0241000-01 | Rice | nucleus | 31.72 | 33.33 |
| KXG21620 | Sorghum | cytosol | 30.01 | 32.61 |
| TraesCSU01G064900.1 | Wheat | cytosol | 31.58 | 32.55 |
| TraesCS7D01G038700.1 | Wheat | cytosol | 31.01 | 32.06 |
| HORVU3Hr1G057330.1 | Barley | cytosol | 30.16 | 31.88 |
| TraesCS3A01G158400.1 | Wheat | cytosol | 30.3 | 31.65 |
| TraesCS7A01G042800.1 | Wheat | cytosol | 30.58 | 31.62 |
| TraesCS3D01G166100.1 | Wheat | cytosol | 28.88 | 31.04 |
| Os01t0235350-00 | Rice | cytosol | 30.44 | 30.57 |
| Zm00001d039272_P003 | Maize | cytosol | 28.31 | 30.47 |
| OQU86053 | Sorghum | cytosol, golgi, nucleus | 28.59 | 30.18 |
| HORVU7Hr1G007940.7 | Barley | mitochondrion | 30.44 | 29.56 |
| Zm00001d010047_P001 | Maize | plastid | 29.59 | 27.77 |
Protein Annotations
| MapMan:20.4.2.2 | EntrezGene:831010 | ProteinID:AED91671.1 | ArrayExpress:AT5G11390 | EnsemblPlantsGene:AT5G11390 | RefSeq:AT5G11390 |
| TAIR:AT5G11390 | RefSeq:AT5G11390-TAIR-G | EnsemblPlants:AT5G11390.1 | TAIR:AT5G11390.1 | EMBL:AY136301 | EMBL:BT000394 |
| ProteinID:CAB96674.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0031965 | RefSeq:NP_196700.2 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR35705 | PANTHER:PTHR35705:SF1 | UniProt:Q8L7E5 | SUPFAM:SSF57997 | TMHMM:TMhelix |
| UniParc:UPI0000196CC4 | Symbol:WIT1 | SEG:seg | : | : | : |
Description
WIT1WPP domain-interacting tail-anchored protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7E5]
Coordinates
chr5:+:3633649..3636934
Molecular Weight (calculated)
79052.8 Da
IEP (calculated)
4.410
GRAVY (calculated)
-0.624
Length
703 amino acids
Sequence
(BLAST)
(BLAST)
001: METETEHDRT VSVDDNDSLV PEPSSTKESF FEDLSLTGQV MNPQLSSAGE VLTKVELDFA FVSEKLVNLS LLTMQLGTRE NDFESFVSKK EEDEEEPSSN
101: VDDDDDSAEK ALEFDLLSSI LNSEVKELES LLGFLQNEIQ SARVMISPFQ HDGEAFLDLE GKLNDTEQSL GQLMEQVVEM KKQSSNFQRL SSGLDEQGSW
201: SGGQTSVSQN DGEFGDLSAK INMQTADQQR NVLRMLEKSL AKEMELEKKL SESRNTEREL EMKLYSSEQD VVYMEEVTED AFSRWLEADN AAEVFKGTSK
301: EMSGKLQILQ FNLSGSFKRE DNLKSKLVDS KERLEAKECA LHKLDSSNAR LADFLVAQTE GLKESLQEAE EKLILLNTEN STLSEKVSSL EEQLNEYGIQ
401: TEDADATSGA LITDLERINE ELKDKLAKTE ARAEETESKC KILEESKKEL QDELGNFRDK GFTIHKLASL EKHLRDSDLQ LEHAVAAVEA SKEKQNLLYS
501: TVSDMEDVIE DLKSKVLKAE NRADITEEKL IMVSESNAEV NEELKFFKGR LKEGEKYLQQ AEERKLRTAK DIGVHNKIMK KLVMQLAAER ERLHKQITNL
601: SRENCVLMVK LKKVGKTGYM ESGNGSEVSP KSDQNASSCH QGSRLQATFI SLTNPEEEET GSKSDIGSVR RLDVGALRFK HILVAILVIL ISSIAYVISQ
701: QNM
101: VDDDDDSAEK ALEFDLLSSI LNSEVKELES LLGFLQNEIQ SARVMISPFQ HDGEAFLDLE GKLNDTEQSL GQLMEQVVEM KKQSSNFQRL SSGLDEQGSW
201: SGGQTSVSQN DGEFGDLSAK INMQTADQQR NVLRMLEKSL AKEMELEKKL SESRNTEREL EMKLYSSEQD VVYMEEVTED AFSRWLEADN AAEVFKGTSK
301: EMSGKLQILQ FNLSGSFKRE DNLKSKLVDS KERLEAKECA LHKLDSSNAR LADFLVAQTE GLKESLQEAE EKLILLNTEN STLSEKVSSL EEQLNEYGIQ
401: TEDADATSGA LITDLERINE ELKDKLAKTE ARAEETESKC KILEESKKEL QDELGNFRDK GFTIHKLASL EKHLRDSDLQ LEHAVAAVEA SKEKQNLLYS
501: TVSDMEDVIE DLKSKVLKAE NRADITEEKL IMVSESNAEV NEELKFFKGR LKEGEKYLQQ AEERKLRTAK DIGVHNKIMK KLVMQLAAER ERLHKQITNL
601: SRENCVLMVK LKKVGKTGYM ESGNGSEVSP KSDQNASSCH QGSRLQATFI SLTNPEEEET GSKSDIGSVR RLDVGALRFK HILVAILVIL ISSIAYVISQ
701: QNM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.