Factsheet for Os05t0241000-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0235350-00
Os03t0209000-01
Os04t0471300-01
Os05t0241000-01
Os05t0409200-00
Os05t0543200-01
Os08t0497900-01
Os09t0481300-01
Os10t0337700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G11390.1	Os05t0409200-00	AT3G63130.1	18591351
AT5G11390.1	Os05t0543200-01	AT3G63130.1	18591351
AT5G11390.1	Os04t0471300-01	AT4G26455.1	18591351
AT5G11390.1	Os08t0497900-01	AT4G26455.1	18591351
AT5G11390.1	Os09t0481300-01	AT4G26455.1	18591351
AT5G11390.1	Os01t0235350-00	AT5G11390.1	18591351
AT5G11390.1	Os05t0241000-01	AT5G11390.1	18591351
AT5G11390.1	Os05t0409200-00	AT5G19320.1	18591351
AT5G11390.1	Os05t0543200-01	AT5G19320.1	18591351
AT5G11390.1	Os03t0209000-01	AT5G27940.1	18591351
AT5G11390.1	Os10t0337700-01	AT5G27940.1	18591351

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G042800.1	Wheat	cytosol	64.13	63.09
TraesCSU01G064900.1	Wheat	cytosol	63.68	62.46
TraesCS7D01G038700.1	Wheat	cytosol	62.93	61.91
KXG21620	Sorghum	cytosol	58.74	60.74
HORVU7Hr1G007940.7	Barley	mitochondrion	64.13	59.25
Zm00001d010047_P001	Maize	plastid	57.7	51.54
Os01t0235350-00	Rice	cytosol	51.42	49.14
GSMUA_Achr1P19080_001	Banana	nucleus	40.81	45.35
GSMUA_Achr7P06030_001	Banana	cytosol, golgi, nucleus	41.85	42.17
KRG93747	Soybean	nucleus	30.79	37.45
VIT_14s0083g00730.t01	Wine grape	nucleus	39.16	36.69
KRH18315	Soybean	nucleus	30.49	36.62
Solyc02g065660.2.1	Tomato	nucleus, plastid	33.18	35.46
KRH01441	Soybean	cytosol	34.08	35.08
PGSC0003DMT400068312	Potato	cytosol, golgi, nucleus	35.73	34.94
AT1G68910.1	Thale cress	cytosol	30.34	32.38
AT5G11390.1	Thale cress	cytosol, golgi, nucleus	33.33	31.72
Bra008966.1-P	Field mustard	nucleus	30.79	31.4
CDX95976	Canola	cytosol, peroxisome, plastid	17.49	31.28
CDX69762	Canola	nucleus	30.49	31.14
PGSC0003DMT400050565	Potato	cytosol, golgi, nucleus	32.29	30.77
Solyc05g010590.2.1	Tomato	nucleus	32.29	30.77
CDX97101	Canola	cytosol, golgi, nucleus	30.19	30.61
CDX81573	Canola	cytosol	28.85	30.25
VIT_01s0010g00750.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	33.03	30.07
CDY45838	Canola	cytosol, golgi, nucleus	28.85	29.97
CDY33569	Canola	cytosol, golgi, peroxisome	28.85	29.69
KRH75191	Soybean	cytosol	29.75	29.22
Bra004347.1-P	Field mustard	cytosol	29.15	29.06
KRH71037	Soybean	cytosol	30.49	28.81
Bra038339.1-P	Field mustard	nucleus	28.7	26.93
CDX95975	Canola	cytosol	6.13	21.93

Protein Annotations

EMBL:AK068369	EnsemblPlants:Os05t0241000-01	EnsemblPlantsGene:Os05g0241000	EntrezGene:4338189	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	ncoils:Coil	PANTHER:PTHR35705	PANTHER:PTHR35705:SF6	ProteinID:AAV24761.1	ProteinID:BAF16913.2
ProteinID:BAS92969.1	ProteinID:EEE62950.1	RefSeq:XP_015640446.1	RefSeq:XP_015640447.1	SUPFAM:SSF57997	TMHMM:TMhelix
UniParc:UPI000044D448	UniProt:Q60EV1	MapMan:20.4.2.2	:	:	:

Description

Prefoldin domain containing protein. (Os05t0241000-01)

Coordinates

chr5:-:8584562..8589468

Molecular Weight (calculated)

74474.7 Da

IEP (calculated)

4.459

GRAVY (calculated)

-0.539

Length

669 amino acids

Sequence
(BLAST)

001: MDVENSMDDD HFQQNMGNGD GMNVEGGSME IITRVELELA FASEKLLNLE MLVMEIARKA TDFEPPTLED ESVSSETAES AFELDILYGF LDAEVGELDD
101: MISTLETDIQ NVEHMVCQDE SGGKIKARLD AAMVSLKQMK ELVSDIRKES AKFEKAIEFP HDKEGITGDA GYENGIVSSH TSMRTEDQRR NVLQMLEQSI
201: ASELDLEKKL SESRCIIEEL KLKLHHHDQE KYFLEESIES LCGKTFAAEN ASEVLLGTSK ELVDKVSTVE CHLSASRCRE GDLESKLGES LMGLSSLQVN
301: AENIQEGSQH SGGTETHPSP ELPSLQDKVK ELEKQLRESD SQLQLAKASA ETFQEEQNVL HAEISTLENI IKSLKEDVSR AESRAQNAEL RCMQLTEANI
401: ELNGELNSLK SHGSEKTSLL ERKLKESHTQ LEHAKASLDA TVEQQSMLRS TMSDMEHMID DLKGKVLKAE TRAENAESKC TLLTDTNLEL SEELSFLRGR
501: AESLENSLHE ANHVKMSTVK DIGIRTKIIT DLVTKLALER ERLHQQISLL TKKNKILAQK CKGSVKDDTQ LSKNVTGKDV ELHSTKLAEE IVPDFSSSQT
601: KAEKPVDPSN EEEKTRSSED DDSGGEGTAE AVRTIQPSVL NWKYITVAFL ILLVAVFIYL PLPEESSSV

Best Arabidopsis Sequence Match ( AT5G11390.1 )
(BLAST)

001: METETEHDRT VSVDDNDSLV PEPSSTKESF FEDLSLTGQV MNPQLSSAGE VLTKVELDFA FVSEKLVNLS LLTMQLGTRE NDFESFVSKK EEDEEEPSSN
101: VDDDDDSAEK ALEFDLLSSI LNSEVKELES LLGFLQNEIQ SARVMISPFQ HDGEAFLDLE GKLNDTEQSL GQLMEQVVEM KKQSSNFQRL SSGLDEQGSW
201: SGGQTSVSQN DGEFGDLSAK INMQTADQQR NVLRMLEKSL AKEMELEKKL SESRNTEREL EMKLYSSEQD VVYMEEVTED AFSRWLEADN AAEVFKGTSK
301: EMSGKLQILQ FNLSGSFKRE DNLKSKLVDS KERLEAKECA LHKLDSSNAR LADFLVAQTE GLKESLQEAE EKLILLNTEN STLSEKVSSL EEQLNEYGIQ
401: TEDADATSGA LITDLERINE ELKDKLAKTE ARAEETESKC KILEESKKEL QDELGNFRDK GFTIHKLASL EKHLRDSDLQ LEHAVAAVEA SKEKQNLLYS
501: TVSDMEDVIE DLKSKVLKAE NRADITEEKL IMVSESNAEV NEELKFFKGR LKEGEKYLQQ AEERKLRTAK DIGVHNKIMK KLVMQLAAER ERLHKQITNL
601: SRENCVLMVK LKKVGKTGYM ESGNGSEVSP KSDQNASSCH QGSRLQATFI SLTNPEEEET GSKSDIGSVR RLDVGALRFK HILVAILVIL ISSIAYVISQ
701: QNM

Arabidopsis Description

WIT1WPP domain-interacting tail-anchored protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7E5]
SUBAcon: [golgi,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.