Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18315 | Soybean | nucleus | 87.09 | 86.0 |
| KRH01441 | Soybean | cytosol | 62.73 | 53.08 |
| VIT_14s0083g00730.t01 | Wine grape | nucleus | 50.18 | 38.66 |
| PGSC0003DMT400068312 | Potato | cytosol, golgi, nucleus | 46.0 | 36.99 |
| Solyc02g065660.2.1 | Tomato | nucleus, plastid | 41.64 | 36.58 |
| GSMUA_Achr1P19080_001 | Banana | nucleus | 39.09 | 35.71 |
| Bra008966.1-P | Field mustard | nucleus | 39.45 | 33.08 |
| CDX69762 | Canola | nucleus | 39.27 | 32.98 |
| AT5G11390.1 | Thale cress | cytosol, golgi, nucleus | 42.0 | 32.86 |
| GSMUA_Achr7P06030_001 | Banana | cytosol, golgi, nucleus | 39.45 | 32.68 |
| CDX97101 | Canola | cytosol, golgi, nucleus | 38.55 | 32.12 |
| Os05t0241000-01 | Rice | nucleus | 37.45 | 30.79 |
| KRH71037 | Soybean | cytosol | 39.27 | 30.51 |
| KRH75191 | Soybean | cytosol | 37.27 | 30.1 |
| KXG21620 | Sorghum | cytosol | 34.55 | 29.37 |
| TraesCS7D01G038700.1 | Wheat | cytosol | 35.64 | 28.82 |
| TraesCSU01G064900.1 | Wheat | cytosol | 35.64 | 28.74 |
| TraesCS7A01G042800.1 | Wheat | cytosol | 35.09 | 28.38 |
| HORVU7Hr1G007940.7 | Barley | mitochondrion | 36.55 | 27.76 |
| Zm00001d039272_P003 | Maize | cytosol | 32.91 | 27.72 |
| HORVU3Hr1G057330.1 | Barley | cytosol | 33.45 | 27.67 |
| TraesCS3D01G166100.1 | Wheat | cytosol | 32.36 | 27.22 |
| TraesCS3A01G158400.1 | Wheat | cytosol | 33.27 | 27.19 |
| OQU86053 | Sorghum | cytosol, golgi, nucleus | 32.55 | 26.88 |
| Os01t0235350-00 | Rice | cytosol | 34.0 | 26.71 |
| Zm00001d010047_P001 | Maize | plastid | 33.64 | 24.7 |
Protein Annotations
| EMBL:ACUP02011617 | EnsemblPlants:KRG93747 | EnsemblPlantsGene:GLYMA_19G037700 | EntrezGene:100792338 | ncoils:Coil | PANTHER:PTHR35705 |
| PANTHER:PTHR35705:SF1 | ProteinID:KRG93747 | ProteinID:KRG93747.1 | SEG:seg | SUPFAM:SSF57997 | UniParc:UPI000295C4BE |
| UniProt:K7MWE7 | MapMan:20.4.2.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:+:5272862..5277114
Molecular Weight (calculated)
61826.0 Da
IEP (calculated)
4.551
GRAVY (calculated)
-0.558
Length
550 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTESAEHDA SVVDLEGVAV SSPSGNVMGD LGDVYSTMLT SLDLGLACFS EKVSNLSNFV MHVETKECEL EALEKEDHIG EKGLEFDLLS VVLDSEVREL
101: EGVLDTLQGG VDEAREWGCS CTHLGEGFVA MQEKLGDYEQ QLKQFEEEFN GIKMQSASFQ RNLSSLKKAE NGEIIREDDK SLSANAEIKL QTVEQQRHIL
201: RMLEKSLARE MDLEKDINDS REIQENLRLK MFFSEQEFVN MEGEAIDVWE RWLEADNASE ILLGISKGLL GKLHISQFSL NGQSHRESEL RANLKDAEDK
301: LTFANSEVSA LSNKVSSLEK QLKESEFQLL NAKASADEYQ KQYNVKCSEA RDMGSVIVEL KEAVYNAESR ANSAETKCKL LTETNSKLDE ELALLRGSST
401: RAELLERQLK ESNLRLQKMT ASAKGSQEKQ SKLYSTIRDM ENVIKDLKSK VSKAEGRADS TEDNCIILSE SNAELNEELS FMRSRLESLE GSLQREEEVK
501: MATVEDIGKQ AKFFKKLVTQ LAVERERLKQ KISSLASENK ILVQKLKQTC
101: EGVLDTLQGG VDEAREWGCS CTHLGEGFVA MQEKLGDYEQ QLKQFEEEFN GIKMQSASFQ RNLSSLKKAE NGEIIREDDK SLSANAEIKL QTVEQQRHIL
201: RMLEKSLARE MDLEKDINDS REIQENLRLK MFFSEQEFVN MEGEAIDVWE RWLEADNASE ILLGISKGLL GKLHISQFSL NGQSHRESEL RANLKDAEDK
301: LTFANSEVSA LSNKVSSLEK QLKESEFQLL NAKASADEYQ KQYNVKCSEA RDMGSVIVEL KEAVYNAESR ANSAETKCKL LTETNSKLDE ELALLRGSST
401: RAELLERQLK ESNLRLQKMT ASAKGSQEKQ SKLYSTIRDM ENVIKDLKSK VSKAEGRADS TEDNCIILSE SNAELNEELS FMRSRLESLE GSLQREEEVK
501: MATVEDIGKQ AKFFKKLVTQ LAVERERLKQ KISSLASENK ILVQKLKQTC
001: METETEHDRT VSVDDNDSLV PEPSSTKESF FEDLSLTGQV MNPQLSSAGE VLTKVELDFA FVSEKLVNLS LLTMQLGTRE NDFESFVSKK EEDEEEPSSN
101: VDDDDDSAEK ALEFDLLSSI LNSEVKELES LLGFLQNEIQ SARVMISPFQ HDGEAFLDLE GKLNDTEQSL GQLMEQVVEM KKQSSNFQRL SSGLDEQGSW
201: SGGQTSVSQN DGEFGDLSAK INMQTADQQR NVLRMLEKSL AKEMELEKKL SESRNTEREL EMKLYSSEQD VVYMEEVTED AFSRWLEADN AAEVFKGTSK
301: EMSGKLQILQ FNLSGSFKRE DNLKSKLVDS KERLEAKECA LHKLDSSNAR LADFLVAQTE GLKESLQEAE EKLILLNTEN STLSEKVSSL EEQLNEYGIQ
401: TEDADATSGA LITDLERINE ELKDKLAKTE ARAEETESKC KILEESKKEL QDELGNFRDK GFTIHKLASL EKHLRDSDLQ LEHAVAAVEA SKEKQNLLYS
501: TVSDMEDVIE DLKSKVLKAE NRADITEEKL IMVSESNAEV NEELKFFKGR LKEGEKYLQQ AEERKLRTAK DIGVHNKIMK KLVMQLAAER ERLHKQITNL
601: SRENCVLMVK LKKVGKTGYM ESGNGSEVSP KSDQNASSCH QGSRLQATFI SLTNPEEEET GSKSDIGSVR RLDVGALRFK HILVAILVIL ISSIAYVISQ
701: QNM
101: VDDDDDSAEK ALEFDLLSSI LNSEVKELES LLGFLQNEIQ SARVMISPFQ HDGEAFLDLE GKLNDTEQSL GQLMEQVVEM KKQSSNFQRL SSGLDEQGSW
201: SGGQTSVSQN DGEFGDLSAK INMQTADQQR NVLRMLEKSL AKEMELEKKL SESRNTEREL EMKLYSSEQD VVYMEEVTED AFSRWLEADN AAEVFKGTSK
301: EMSGKLQILQ FNLSGSFKRE DNLKSKLVDS KERLEAKECA LHKLDSSNAR LADFLVAQTE GLKESLQEAE EKLILLNTEN STLSEKVSSL EEQLNEYGIQ
401: TEDADATSGA LITDLERINE ELKDKLAKTE ARAEETESKC KILEESKKEL QDELGNFRDK GFTIHKLASL EKHLRDSDLQ LEHAVAAVEA SKEKQNLLYS
501: TVSDMEDVIE DLKSKVLKAE NRADITEEKL IMVSESNAEV NEELKFFKGR LKEGEKYLQQ AEERKLRTAK DIGVHNKIMK KLVMQLAAER ERLHKQITNL
601: SRENCVLMVK LKKVGKTGYM ESGNGSEVSP KSDQNASSCH QGSRLQATFI SLTNPEEEET GSKSDIGSVR RLDVGALRFK HILVAILVIL ISSIAYVISQ
701: QNM
Arabidopsis Description
WIT1WPP domain-interacting tail-anchored protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7E5]
SUBAcon: [golgi,nucleus,cytosol]
SUBAcon: [golgi,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.