Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU86053 | Sorghum | cytosol, golgi, nucleus | 80.55 | 78.98 |
| TraesCS3A01G158400.1 | Wheat | cytosol | 57.43 | 55.72 |
| HORVU3Hr1G057330.1 | Barley | cytosol | 56.36 | 55.34 |
| TraesCS3D01G166100.1 | Wheat | cytosol | 55.28 | 55.2 |
| Os01t0235350-00 | Rice | cytosol | 54.36 | 50.71 |
| Zm00001d010047_P001 | Maize | plastid | 47.01 | 40.99 |
| GSMUA_Achr1P19080_001 | Banana | nucleus | 37.21 | 40.37 |
| GSMUA_Achr7P06030_001 | Banana | cytosol, golgi, nucleus | 36.75 | 36.14 |
| Solyc02g065660.2.1 | Tomato | nucleus, plastid | 32.47 | 33.87 |
| KRG93747 | Soybean | nucleus | 27.72 | 32.91 |
| KRH18315 | Soybean | nucleus | 28.02 | 32.85 |
| VIT_14s0083g00730.t01 | Wine grape | nucleus | 35.83 | 32.77 |
| KRH01441 | Soybean | cytosol | 31.39 | 31.54 |
| PGSC0003DMT400068312 | Potato | cytosol, golgi, nucleus | 32.77 | 31.29 |
| CDX95976 | Canola | cytosol, peroxisome, plastid | 17.3 | 30.21 |
| CDX69762 | Canola | nucleus | 29.4 | 29.31 |
| Bra008966.1-P | Field mustard | nucleus | 29.4 | 29.27 |
| AT1G68910.1 | Thale cress | cytosol | 28.02 | 29.19 |
| VIT_01s0010g00750.t01 | Wine grape | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 32.31 | 28.71 |
| CDX97101 | Canola | cytosol, golgi, nucleus | 28.94 | 28.64 |
| CDY33569 | Canola | cytosol, golgi, peroxisome | 28.18 | 28.31 |
| AT5G11390.1 | Thale cress | cytosol, golgi, nucleus | 30.47 | 28.31 |
| CDY45838 | Canola | cytosol, golgi, nucleus | 27.87 | 28.26 |
| KRH75191 | Soybean | cytosol | 29.4 | 28.19 |
| CDX81573 | Canola | cytosol | 27.11 | 27.74 |
| Bra004347.1-P | Field mustard | cytosol | 28.48 | 27.72 |
| KRH71037 | Soybean | cytosol | 29.56 | 27.26 |
| PGSC0003DMT400050565 | Potato | cytosol, golgi, nucleus | 28.48 | 26.5 |
| Solyc05g010590.2.1 | Tomato | nucleus | 28.48 | 26.5 |
| Bra038339.1-P | Field mustard | nucleus | 27.26 | 24.96 |
| CDX95975 | Canola | cytosol | 6.89 | 24.06 |
Protein Annotations
| EMBL:BT063268 | EnsemblPlants:Zm00001d039272_P003 | EnsemblPlants:Zm00001d039272_T003 | EnsemblPlantsGene:Zm00001d039272 | EntrezGene:100275686 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | ncoils:Coil | PANTHER:PTHR35705 | PANTHER:PTHR35705:SF1 | ProteinID:ONM28177.1 |
| ProteinID:ONM28178.1 | SEG:seg | SUPFAM:SSF57997 | TMHMM:TMhelix | UniParc:UPI000194904F | UniProt:C0P4P9 |
| MapMan:20.4.2.2 | : | : | : | : | : |
Description
bHLH-transcription factor 46WPP domain-interacting tail-anchored protein 1
Coordinates
chr3:+:897762..901853
Molecular Weight (calculated)
72357.4 Da
IEP (calculated)
4.580
GRAVY (calculated)
-0.474
Length
653 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFHNIDDYF HENSPAQGGE GAAEASAEAI LERVYRDTAF GSEKLLNLDM LVMEIARRAS DIEPLMWDPR SISSESVGKA FEFDVLHGIV DSEVSELEKL
101: AASIQTDIGN AETKALGGEP GSRVTDELCA RKESLKQMQD VISDIRTQLA TFENAIQPSH GKQGNSEGMG YENGHISGHT AMQAEDQRNV LQMLQQSIAS
201: KLDLENKLRD SQSVVEDLKM KLHHAEQESC FLEESIKELY ERTLSAENAS QLLLGTSKEL VAKFNTTQSY LSASIRREDD LKSKLDENLM KLSGNKSTRE
301: TVLGDSDNNA NQEPVQMRVL SRPEFQNLWN KVQQLEELLR DSGSQLQQSS LSRGADEEEQ DTAQSGISAF GNVIADFKLA ISNAESRAQN AETRCTQLTR
401: TNVQLNGELN TLKSQGSDRA GLLETKLKES DTQLEHARAS VDAIVEQQGM LRSSMSDMEL VIEDMKEKYL KAETRAESAE SKCALLTDTN LELSEELSFL
501: RGRVERLENS LHEANQLKVS SAKDIASKTK TIMDLVAKLS LERERLHVQV VTLAKKNGAL AQKCKENVSE RTLLCKNVTT GEGVLRPVQV KEEVEADEVV
601: IPDECTVRSI EPTTMTMVNW KYISAAVLAL LAAAVVFQLL RANLMMTTAV NDC
101: AASIQTDIGN AETKALGGEP GSRVTDELCA RKESLKQMQD VISDIRTQLA TFENAIQPSH GKQGNSEGMG YENGHISGHT AMQAEDQRNV LQMLQQSIAS
201: KLDLENKLRD SQSVVEDLKM KLHHAEQESC FLEESIKELY ERTLSAENAS QLLLGTSKEL VAKFNTTQSY LSASIRREDD LKSKLDENLM KLSGNKSTRE
301: TVLGDSDNNA NQEPVQMRVL SRPEFQNLWN KVQQLEELLR DSGSQLQQSS LSRGADEEEQ DTAQSGISAF GNVIADFKLA ISNAESRAQN AETRCTQLTR
401: TNVQLNGELN TLKSQGSDRA GLLETKLKES DTQLEHARAS VDAIVEQQGM LRSSMSDMEL VIEDMKEKYL KAETRAESAE SKCALLTDTN LELSEELSFL
501: RGRVERLENS LHEANQLKVS SAKDIASKTK TIMDLVAKLS LERERLHVQV VTLAKKNGAL AQKCKENVSE RTLLCKNVTT GEGVLRPVQV KEEVEADEVV
601: IPDECTVRSI EPTTMTMVNW KYISAAVLAL LAAAVVFQLL RANLMMTTAV NDC
001: MEEIIREDYF EALSSRNEEE QEMLRMLTKL EIDSAYTSEK LMNLHVLLMH LLAWDNDLEG MGTLDSSPAS FEKALTFDLL CGILESEVKE VDEVLDVLEA
101: QIVDTSYKIS SCKHGNYIVI EGKLGESAES LKQSRGQVSE ITLQLAQLRR TLHYIRNGTS ENEESVELRQ KYALKPSDLR HKNALRMLEK SLSRELELEK
201: KLMEFQQNEE QLKLKLHYTE EVSSRMEEAS EFIWGRFLEA DNSSEVLTGI SKELVGRLQI LQFSLNGSAQ RESELKSKLE DCTVQLEAKD LLVQKLEGTI
301: SENSEIVSEV LTLREYVKSA EQKLKNTDLE LKSVNASKQE ILVHLAEMEN ANESVKENLF EAESRAESGE AKIKELDAAN LELTEELNFL KDADDKKTKK
401: VNSLEKQVRE LEVQVQNSKV SSEANQEQQN MLYSAIWDME TLIEDLKSKA SKAESRTETV EEQCIVLSTT NSELNKDVSF LRQKAKSLEA MLDLANNEKE
501: RYAQEITTRN KVLMDMMLQL SSERERIQEQ LYSLAKENKI LRVNQCSNTY QRNGSYAGDK ELSFHADGHE IEALAESLQE DERTREEPEK QSVSEKSSEI
601: RRAIKLKHIL VVALVFVLFC SFFGVTY
101: QIVDTSYKIS SCKHGNYIVI EGKLGESAES LKQSRGQVSE ITLQLAQLRR TLHYIRNGTS ENEESVELRQ KYALKPSDLR HKNALRMLEK SLSRELELEK
201: KLMEFQQNEE QLKLKLHYTE EVSSRMEEAS EFIWGRFLEA DNSSEVLTGI SKELVGRLQI LQFSLNGSAQ RESELKSKLE DCTVQLEAKD LLVQKLEGTI
301: SENSEIVSEV LTLREYVKSA EQKLKNTDLE LKSVNASKQE ILVHLAEMEN ANESVKENLF EAESRAESGE AKIKELDAAN LELTEELNFL KDADDKKTKK
401: VNSLEKQVRE LEVQVQNSKV SSEANQEQQN MLYSAIWDME TLIEDLKSKA SKAESRTETV EEQCIVLSTT NSELNKDVSF LRQKAKSLEA MLDLANNEKE
501: RYAQEITTRN KVLMDMMLQL SSERERIQEQ LYSLAKENKI LRVNQCSNTY QRNGSYAGDK ELSFHADGHE IEALAESLQE DERTREEPEK QSVSEKSSEI
601: RRAIKLKHIL VVALVFVLFC SFFGVTY
Arabidopsis Description
WIT2WPP domain-interacting tail-anchored protein 2 [Source:UniProtKB/Swiss-Prot;Acc:A8MQR0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.