Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
27297264
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER97479 | Sorghum | nucleus | 82.76 | 83.24 |
| Zm00001d022025_P001 | Maize | extracellular, mitochondrion | 75.29 | 78.92 |
| TraesCS2D01G191500.1 | Wheat | nucleus | 68.97 | 73.17 |
| TraesCS2A01G183600.1 | Wheat | nucleus | 68.97 | 72.73 |
| TraesCS2B01G210200.1 | Wheat | nucleus | 68.39 | 72.56 |
| HORVU2Hr1G034580.1 | Barley | cytosol, nucleus | 70.11 | 58.1 |
| Zm00001d048123_P001 | Maize | cytosol | 40.8 | 50.0 |
| Zm00001d028043_P001 | Maize | mitochondrion | 39.66 | 47.92 |
| GSMUA_Achr9P09500_001 | Banana | cytosol | 33.91 | 46.46 |
| KRH15424 | Soybean | nucleus, plastid | 31.61 | 44.72 |
| KRH05617 | Soybean | nucleus | 33.33 | 42.96 |
| KRH61362 | Soybean | endoplasmic reticulum | 37.36 | 40.37 |
| KRH52049 | Soybean | endoplasmic reticulum | 36.78 | 39.75 |
| PGSC0003DMT400008558 | Potato | nucleus | 34.48 | 39.47 |
| Solyc04g078380.1.1 | Tomato | plastid | 33.91 | 38.82 |
| VIT_18s0001g09670.t01 | Wine grape | nucleus | 33.91 | 36.2 |
| AT5G43070.1 | Thale cress | cytosol | 29.31 | 32.9 |
| GSMUA_Achr4P14260_001 | Banana | cytosol | 32.18 | 32.0 |
| CDY17041 | Canola | nucleus | 30.46 | 30.64 |
| Bra040794.1-P | Field mustard | nucleus | 30.46 | 30.64 |
| CDY66769 | Canola | nucleus | 29.89 | 30.06 |
| CDY47600 | Canola | nucleus | 30.46 | 29.94 |
| CDY06758 | Canola | nucleus | 28.16 | 29.52 |
| Bra040752.1-P | Field mustard | nucleus | 28.16 | 29.52 |
| AT1G47200.1 | Thale cress | nucleus | 28.16 | 27.22 |
| AT5G27940.1 | Thale cress | nucleus | 20.11 | 22.29 |
Protein Annotations
| EMBL:BT063011 | EnsemblPlants:Zm00001d006756_P001 | EnsemblPlants:Zm00001d006756_T001 | EnsemblPlantsGene:Zm00001d006756 | EntrezGene:100278282 | Gene3D:1.10.246.200 |
| InterPro:IPR038214 | InterPro:WPP_dom | InterPro:WPP_sf | PANTHER:PTHR34362 | PANTHER:PTHR34362:SF3 | PFAM:PF13943 |
| ProteinID:ONM24927.1 | SEG:seg | UniParc:UPI000194903E | UniProt:C0P3Z2 | MapMan:35.2 | : |
Description
WPP domain-containing protein 2
Coordinates
chr2:+:215978477..215979001
Molecular Weight (calculated)
17344.9 Da
IEP (calculated)
4.127
GRAVY (calculated)
-0.101
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEDAPNAVA EGSQPAASEG SADAALPAAA GAKAAEALLP SLSIWPPSQR TRDAVVRRLV QTLAAPSVLS QRYGAVPEPE AERAAVAVEA EAFAAASKSA
101: AAAAECPASV EEGIEVLQAY SKEVSRRLLE LAKTRSAAAA AAPAPAEGSA QAQESAEASS ATAPPTEEAA VNEE
101: AAAAECPASV EEGIEVLQAY SKEVSRRLLE LAKTRSAAAA AAPAPAEGSA QAQESAEASS ATAPPTEEAA VNEE
001: MAETETESIT TSSPPPISET ENSTTLPTTE TEKNPNPVTI SLRIWPPTQK TRDAVINRLI ETLSTESILS KRFGSLESEE ASSVAKSIED EAYAIASATV
101: FGDDDGIEIL KAYSKEISKR MLESVKAKSN VASPPPKDGD GIESAVDSKI DSSEA
101: FGDDDGIEIL KAYSKEISKR MLESVKAKSN VASPPPKDGD GIESAVDSKI DSSEA
Arabidopsis Description
WPP1WPP domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMH6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.