Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g078380.1.1 | Tomato | plastid | 98.03 | 98.03 |
| KRH15424 | Soybean | nucleus, plastid | 48.03 | 59.35 |
| KRH05617 | Soybean | nucleus | 48.03 | 54.07 |
| KRH52049 | Soybean | endoplasmic reticulum | 50.66 | 47.83 |
| VIT_18s0001g09670.t01 | Wine grape | nucleus | 50.0 | 46.63 |
| KRH61362 | Soybean | endoplasmic reticulum | 49.34 | 46.58 |
| GSMUA_Achr9P09500_001 | Banana | cytosol | 38.82 | 46.46 |
| AT5G43070.1 | Thale cress | cytosol | 45.39 | 44.52 |
| Zm00001d028043_P001 | Maize | mitochondrion | 42.11 | 44.44 |
| Bra040752.1-P | Field mustard | nucleus | 48.03 | 43.98 |
| CDY06758 | Canola | nucleus | 48.03 | 43.98 |
| KXG39905 | Sorghum | cytosol | 40.79 | 43.97 |
| HORVU4Hr1G069210.1 | Barley | cytosol | 39.47 | 43.48 |
| TraesCS4B01G252900.1 | Wheat | cytosol | 37.5 | 43.18 |
| Zm00001d048123_P001 | Maize | cytosol | 40.13 | 42.96 |
| CDY66769 | Canola | nucleus | 48.68 | 42.77 |
| TraesCS4D01G253000.1 | Wheat | cytosol | 37.5 | 42.54 |
| TraesCS4A01G051500.1 | Wheat | cytosol | 37.5 | 42.54 |
| Bra040794.1-P | Field mustard | nucleus | 46.71 | 41.04 |
| CDY17041 | Canola | nucleus | 46.71 | 41.04 |
| CDY47600 | Canola | nucleus | 46.71 | 40.11 |
| Os03t0209000-01 | Rice | cytosol | 39.47 | 38.71 |
| AT1G47200.1 | Thale cress | nucleus | 44.74 | 37.78 |
| GSMUA_Achr4P14260_001 | Banana | cytosol | 43.42 | 37.71 |
| Os10t0337700-01 | Rice | plastid | 34.21 | 37.14 |
| TraesCS2A01G183600.1 | Wheat | nucleus | 40.13 | 36.97 |
| TraesCS2D01G191500.1 | Wheat | nucleus | 39.47 | 36.59 |
| TraesCS2B01G210200.1 | Wheat | nucleus | 39.47 | 36.59 |
| Zm00001d022025_P001 | Maize | extracellular, mitochondrion | 38.16 | 34.94 |
| EER97479 | Sorghum | nucleus | 39.47 | 34.68 |
| Zm00001d006756_P001 | Maize | mitochondrion | 39.47 | 34.48 |
| AT5G27940.1 | Thale cress | nucleus | 29.61 | 28.66 |
| HORVU2Hr1G034580.1 | Barley | cytosol, nucleus | 36.18 | 26.19 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400008558 | EnsemblPlantsGene:PGSC0003DMG400003309 | EntrezGene:102580394 | Gene3D:1.10.246.200 | InterPro:IPR038214 | InterPro:WPP_dom |
| InterPro:WPP_sf | PANTHER:PTHR34362 | PANTHER:PTHR34362:SF1 | PFAM:PF13943 | PGSC:PGSC0003DMG400003309 | RefSeq:XP_006367417.1 |
| SEG:seg | UniParc:UPI000295EBA7 | UniProt:M0ZUR3 | MapMan:35.1 | : | : |
Description
MFP1 attachment factor 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400003309]
Coordinates
chr4:+:67567067..67568477
Molecular Weight (calculated)
16181.5 Da
IEP (calculated)
4.056
GRAVY (calculated)
-0.557
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEIDSAQSQ ETVSQETQNK PMTTSFSIWP PTQRTRDAVI NRLIESLSTP SILSKRYGTL PQDEASETAR LIEEEAFAAA GSTATDADDG IEILQVYSKE
101: ISKRMLDTVK SRSAPAAASE GESKPSELPA DASEPSSASG LTGEVSSVET EP
101: ISKRMLDTVK SRSAPAAASE GESKPSELPA DASEPSSASG LTGEVSSVET EP
001: MAETAETINT TISSPPPESE SSTTISAMTD PTSQEAASKD TDLTKEAESE KKPGGISLRI WPPTQKTRDA VLNRLIETLS TESILSKRYG TLKSDDATTV
101: AKLIEEEAYG VASNAVSSDD DGIKILELYS KEISKRMLES VKARSNASVG NGSVEDANTD ASEVSKDDAG PASEEEKSEA
101: AKLIEEEAYG VASNAVSSDD DGIKILELYS KEISKRMLES VKARSNASVG NGSVEDANTD ASEVSKDDAG PASEEEKSEA
Arabidopsis Description
WPP2WPP domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C500]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.