Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15424 | Soybean | nucleus, plastid | 29.3 | 37.4 |
| Bra040752.1-P | Field mustard | nucleus | 38.85 | 36.75 |
| CDY06758 | Canola | nucleus | 38.85 | 36.75 |
| Bra040794.1-P | Field mustard | nucleus | 38.22 | 34.68 |
| CDY17041 | Canola | nucleus | 38.22 | 34.68 |
| CDY66769 | Canola | nucleus | 38.22 | 34.68 |
| GSMUA_Achr9P09500_001 | Banana | cytosol | 28.03 | 34.65 |
| CDY47600 | Canola | nucleus | 38.85 | 34.46 |
| AT5G43070.1 | Thale cress | cytosol | 33.76 | 34.19 |
| AT1G47200.1 | Thale cress | nucleus | 38.22 | 33.33 |
| KRH05617 | Soybean | nucleus | 28.66 | 33.33 |
| Solyc04g078380.1.1 | Tomato | plastid | 29.3 | 30.26 |
| PGSC0003DMT400008558 | Potato | nucleus | 28.66 | 29.61 |
| KRH52049 | Soybean | endoplasmic reticulum | 28.66 | 27.95 |
| KRH61362 | Soybean | endoplasmic reticulum | 28.03 | 27.33 |
| VIT_18s0001g09670.t01 | Wine grape | nucleus | 28.03 | 26.99 |
| TraesCS4B01G252900.1 | Wheat | cytosol | 21.66 | 25.76 |
| GSMUA_Achr4P14260_001 | Banana | cytosol | 28.66 | 25.71 |
| KXG39905 | Sorghum | cytosol | 22.93 | 25.53 |
| TraesCS4D01G253000.1 | Wheat | cytosol | 21.66 | 25.37 |
| TraesCS4A01G051500.1 | Wheat | cytosol | 21.66 | 25.37 |
| Os03t0209000-01 | Rice | cytosol | 24.84 | 25.16 |
| Zm00001d028043_P001 | Maize | mitochondrion | 22.93 | 25.0 |
| Zm00001d048123_P001 | Maize | cytosol | 22.29 | 24.65 |
| HORVU4Hr1G069210.1 | Barley | cytosol | 21.66 | 24.64 |
| TraesCS2D01G191500.1 | Wheat | nucleus | 25.48 | 24.39 |
| TraesCS2B01G210200.1 | Wheat | nucleus | 25.48 | 24.39 |
| TraesCS2A01G183600.1 | Wheat | nucleus | 24.84 | 23.64 |
| Os10t0337700-01 | Rice | plastid | 20.38 | 22.86 |
| Zm00001d022025_P001 | Maize | extracellular, mitochondrion | 23.57 | 22.29 |
| EER97479 | Sorghum | nucleus | 23.57 | 21.39 |
| Zm00001d006756_P001 | Maize | mitochondrion | 22.29 | 20.11 |
| HORVU2Hr1G034580.1 | Barley | cytosol, nucleus | 25.48 | 19.05 |
Protein Annotations
| Gene3D:1.10.246.200 | MapMan:35.1 | EntrezGene:832861 | EMBL:AC007399 | ProteinID:AED93747.1 | EMBL:AK228812 |
| ArrayExpress:AT5G27940 | EnsemblPlantsGene:AT5G27940 | RefSeq:AT5G27940 | TAIR:AT5G27940 | RefSeq:AT5G27940-TAIR-G | EnsemblPlants:AT5G27940.1 |
| TAIR:AT5G27940.1 | EMBL:AY085851 | EMBL:BT030603 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0008150 | InterPro:IPR038214 | RefSeq:NP_568504.1 | PFAM:PF13943 |
| PO:PO:0000084 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009047 | PANTHER:PTHR34362 | UniProt:Q0WQ91 |
| UniParc:UPI0000162618 | Symbol:WPP3 | InterPro:WPP_dom | InterPro:WPP_sf | : | : |
Description
WPP3WPP domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQ91]
Coordinates
chr5:+:9974411..9975203
Molecular Weight (calculated)
17455.7 Da
IEP (calculated)
4.729
GRAVY (calculated)
-0.403
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MAETADTINT TVSTPQPQLE SRSDETSCLQ KHRSDATSEV TKEEKSGGIL FSVWPPCQKS RDYVVNSMIK TLSTDSILSY KYGTIKPEEA SAVAKSIEEK
101: AYDIASRFVS SDGIKNLEVY GIETSERMIE SAEVRFKANG SMELLLNQTI KMMQLLI
101: AYDIASRFVS SDGIKNLEVY GIETSERMIE SAEVRFKANG SMELLLNQTI KMMQLLI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.