Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
mitochondrion: 27297264 |
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER97479 | Sorghum | nucleus | 81.93 | 78.61 |
| Zm00001d006756_P001 | Maize | mitochondrion | 78.92 | 75.29 |
| TraesCS2D01G191500.1 | Wheat | nucleus | 69.28 | 70.12 |
| TraesCS2B01G210200.1 | Wheat | nucleus | 68.07 | 68.9 |
| TraesCS2A01G183600.1 | Wheat | nucleus | 68.07 | 68.48 |
| HORVU2Hr1G034580.1 | Barley | cytosol, nucleus | 69.28 | 54.76 |
| Zm00001d048123_P001 | Maize | cytosol | 42.17 | 49.3 |
| Zm00001d028043_P001 | Maize | mitochondrion | 40.96 | 47.22 |
| KRH15424 | Soybean | nucleus, plastid | 34.34 | 46.34 |
| GSMUA_Achr9P09500_001 | Banana | cytosol | 34.34 | 44.88 |
| KRH05617 | Soybean | nucleus | 35.54 | 43.7 |
| PGSC0003DMT400008558 | Potato | nucleus | 34.94 | 38.16 |
| KRH52049 | Soybean | endoplasmic reticulum | 36.75 | 37.89 |
| Solyc04g078380.1.1 | Tomato | plastid | 34.34 | 37.5 |
| KRH61362 | Soybean | endoplasmic reticulum | 34.94 | 36.02 |
| VIT_18s0001g09670.t01 | Wine grape | nucleus | 33.73 | 34.36 |
| GSMUA_Achr4P14260_001 | Banana | cytosol | 35.54 | 33.71 |
| AT5G43070.1 | Thale cress | cytosol | 29.52 | 31.61 |
| CDY17041 | Canola | nucleus | 32.53 | 31.21 |
| Bra040794.1-P | Field mustard | nucleus | 32.53 | 31.21 |
| CDY06758 | Canola | nucleus | 30.12 | 30.12 |
| Bra040752.1-P | Field mustard | nucleus | 30.12 | 30.12 |
| CDY66769 | Canola | nucleus | 31.33 | 30.06 |
| CDY47600 | Canola | nucleus | 31.93 | 29.94 |
| AT1G47200.1 | Thale cress | nucleus | 30.72 | 28.33 |
| AT5G27940.1 | Thale cress | nucleus | 22.29 | 23.57 |
Protein Annotations
| EnsemblPlants:Zm00001d022025_P001 | EnsemblPlants:Zm00001d022025_T001 | EnsemblPlantsGene:Zm00001d022025 | Gene3D:1.10.246.200 | InterPro:IPR038214 | InterPro:WPP_dom |
| InterPro:WPP_sf | PANTHER:PTHR34362 | PANTHER:PTHR34362:SF3 | PFAM:PF13943 | ProteinID:ONM59326.1 | SEG:seg |
| UniParc:UPI000220C68C | UniProt:A0A1D6IIL4 | MapMan:35.2 | : | : | : |
Description
WPP domain-containing protein 2
Coordinates
chr7:+:168232228..168232728
Molecular Weight (calculated)
16695.1 Da
IEP (calculated)
4.152
GRAVY (calculated)
-0.247
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEDAPNAAA EGGQPAPPEG SADAAPSATA GAKAAEALLP SLSIWPPSQR TRDAVVRRLV QTLAAPSVLS QRYGAVPESE AERAAAAVEA EAFAAASKSA
101: AAESPASIEE GIEVLQAYSK EVSRRLLELA KTRSAAATVP AEGSAQEAED SSATSPAAEE AAVKEE
101: AAESPASIEE GIEVLQAYSK EVSRRLLELA KTRSAAATVP AEGSAQEAED SSATSPAAEE AAVKEE
001: MAETAETINT TISSPPPESE SSTTISAMTD PTSQEAASKD TDLTKEAESE KKPGGISLRI WPPTQKTRDA VLNRLIETLS TESILSKRYG TLKSDDATTV
101: AKLIEEEAYG VASNAVSSDD DGIKILELYS KEISKRMLES VKARSNASVG NGSVEDANTD ASEVSKDDAG PASEEEKSEA
101: AKLIEEEAYG VASNAVSSDD DGIKILELYS KEISKRMLES VKARSNASVG NGSVEDANTD ASEVSKDDAG PASEEEKSEA
Arabidopsis Description
WPP2WPP domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C500]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.