Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G158400.1 | Wheat | cytosol | 94.95 | 92.27 |
| HORVU3Hr1G057330.1 | Barley | cytosol | 87.0 | 85.56 |
| Zm00001d039272_P003 | Maize | cytosol | 55.2 | 55.28 |
| OQU86053 | Sorghum | cytosol, golgi, nucleus | 54.43 | 53.45 |
| Os01t0235350-00 | Rice | cytosol | 57.19 | 53.43 |
| TraesCS7D01G038700.1 | Wheat | cytosol | 49.69 | 47.79 |
| GSMUA_Achr1P19080_001 | Banana | nucleus | 37.31 | 40.53 |
| GSMUA_Achr7P06030_001 | Banana | cytosol, golgi, nucleus | 37.61 | 37.05 |
| KRH18315 | Soybean | nucleus | 27.83 | 32.67 |
| Solyc02g065660.2.1 | Tomato | nucleus, plastid | 31.19 | 32.59 |
| KRG93747 | Soybean | nucleus | 27.22 | 32.36 |
| VIT_14s0083g00730.t01 | Wine grape | nucleus | 35.32 | 32.35 |
| KRH01441 | Soybean | cytosol | 30.73 | 30.92 |
| PGSC0003DMT400068312 | Potato | cytosol, golgi, nucleus | 31.8 | 30.41 |
| CDX69762 | Canola | nucleus | 29.97 | 29.92 |
| Bra008966.1-P | Field mustard | nucleus | 29.82 | 29.73 |
| CDX95976 | Canola | cytosol, peroxisome, plastid | 16.97 | 29.68 |
| CDX97101 | Canola | cytosol, golgi, nucleus | 29.66 | 29.39 |
| AT5G11390.1 | Thale cress | cytosol, golgi, nucleus | 31.04 | 28.88 |
| AT1G68910.1 | Thale cress | cytosol | 27.06 | 28.23 |
| CDY33569 | Canola | cytosol, golgi, peroxisome | 27.68 | 27.85 |
| CDY45838 | Canola | cytosol, golgi, nucleus | 27.37 | 27.8 |
| VIT_01s0010g00750.t01 | Wine grape | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 31.04 | 27.62 |
| CDX81573 | Canola | cytosol | 26.61 | 27.27 |
| Bra004347.1-P | Field mustard | cytosol | 27.06 | 26.38 |
| PGSC0003DMT400050565 | Potato | cytosol, golgi, nucleus | 27.83 | 25.93 |
| Solyc05g010590.2.1 | Tomato | nucleus | 27.68 | 25.78 |
| KRH75191 | Soybean | cytosol | 26.76 | 25.7 |
| KRH71037 | Soybean | cytosol | 27.22 | 25.14 |
| Bra038339.1-P | Field mustard | nucleus | 27.22 | 24.96 |
| CDX95975 | Canola | cytosol | 6.88 | 24.06 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G166100.1 | EnsemblPlantsGene:TraesCS3D01G166100 | ncoils:Coil | PANTHER:PTHR35705 | PANTHER:PTHR35705:SF1 | SEG:seg |
| SUPFAM:SSF57997 | MapMan:20.4.2.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:138075167..138078522
Molecular Weight (calculated)
72912.7 Da
IEP (calculated)
4.621
GRAVY (calculated)
-0.393
Length
654 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFQSTQDDY CFQENVLPHG DGSNGAGNAA DVMSRVDLKI HFGSEKLLNL EMLVMEVADR ANDIEPLMLD PGSLSTESLE NAFEFDLLYG ILDAEVRELE
101: RLVSYIQIDI GNIEKKLNGE ESEGWLKRKL HAAMDSLKQM QEVIATIRRE FANFEKALDP SHRKAGNSEG DAYENGHVSS HTTIQAEGQR NVLQMLEQSI
201: ANELDLEKKL SDLGVLESVE AISERMFAAE NASELFLVTS KELVNRINTM QYQLSASGCR ESDLKAKLEQ SLVHLNALNG SLEMMQYGGE KNASQDCMQS
301: QRLSTPEFFA LQHKVQKLEE WLRESCSQLQ FITVSTEGNE KEQNMSPSEI STFSNIINDI KDAVSKAESR TQKAEARCAE LTRTNVQLNG ELNHMKTRGS
401: DKAGLLEMDL METEAQLEHT MASVEAISEH QSMLKSSISD MQHVIEDLKD KYLKAETRAE SAESKCTLLR DTSFKLSEEI SFLRGRVGGL ENSLCQANQL
501: KLSTAKDIGI KTKTITDLVA KLALERERLH LQIVTLTRKN RMLTQKCKEN DNEGTLLSKK VTANEGELGP TGVTEEVLLD SSSIQTKVKA DALMGEKEAG
601: ITAVLDDESC TLETVRSIEP TLLNWKYIFV AFLFLLAAAL VRLQLTYPVL PGST
101: RLVSYIQIDI GNIEKKLNGE ESEGWLKRKL HAAMDSLKQM QEVIATIRRE FANFEKALDP SHRKAGNSEG DAYENGHVSS HTTIQAEGQR NVLQMLEQSI
201: ANELDLEKKL SDLGVLESVE AISERMFAAE NASELFLVTS KELVNRINTM QYQLSASGCR ESDLKAKLEQ SLVHLNALNG SLEMMQYGGE KNASQDCMQS
301: QRLSTPEFFA LQHKVQKLEE WLRESCSQLQ FITVSTEGNE KEQNMSPSEI STFSNIINDI KDAVSKAESR TQKAEARCAE LTRTNVQLNG ELNHMKTRGS
401: DKAGLLEMDL METEAQLEHT MASVEAISEH QSMLKSSISD MQHVIEDLKD KYLKAETRAE SAESKCTLLR DTSFKLSEEI SFLRGRVGGL ENSLCQANQL
501: KLSTAKDIGI KTKTITDLVA KLALERERLH LQIVTLTRKN RMLTQKCKEN DNEGTLLSKK VTANEGELGP TGVTEEVLLD SSSIQTKVKA DALMGEKEAG
601: ITAVLDDESC TLETVRSIEP TLLNWKYIFV AFLFLLAAAL VRLQLTYPVL PGST
001: METETEHDRT VSVDDNDSLV PEPSSTKESF FEDLSLTGQV MNPQLSSAGE VLTKVELDFA FVSEKLVNLS LLTMQLGTRE NDFESFVSKK EEDEEEPSSN
101: VDDDDDSAEK ALEFDLLSSI LNSEVKELES LLGFLQNEIQ SARVMISPFQ HDGEAFLDLE GKLNDTEQSL GQLMEQVVEM KKQSSNFQRL SSGLDEQGSW
201: SGGQTSVSQN DGEFGDLSAK INMQTADQQR NVLRMLEKSL AKEMELEKKL SESRNTEREL EMKLYSSEQD VVYMEEVTED AFSRWLEADN AAEVFKGTSK
301: EMSGKLQILQ FNLSGSFKRE DNLKSKLVDS KERLEAKECA LHKLDSSNAR LADFLVAQTE GLKESLQEAE EKLILLNTEN STLSEKVSSL EEQLNEYGIQ
401: TEDADATSGA LITDLERINE ELKDKLAKTE ARAEETESKC KILEESKKEL QDELGNFRDK GFTIHKLASL EKHLRDSDLQ LEHAVAAVEA SKEKQNLLYS
501: TVSDMEDVIE DLKSKVLKAE NRADITEEKL IMVSESNAEV NEELKFFKGR LKEGEKYLQQ AEERKLRTAK DIGVHNKIMK KLVMQLAAER ERLHKQITNL
601: SRENCVLMVK LKKVGKTGYM ESGNGSEVSP KSDQNASSCH QGSRLQATFI SLTNPEEEET GSKSDIGSVR RLDVGALRFK HILVAILVIL ISSIAYVISQ
701: QNM
101: VDDDDDSAEK ALEFDLLSSI LNSEVKELES LLGFLQNEIQ SARVMISPFQ HDGEAFLDLE GKLNDTEQSL GQLMEQVVEM KKQSSNFQRL SSGLDEQGSW
201: SGGQTSVSQN DGEFGDLSAK INMQTADQQR NVLRMLEKSL AKEMELEKKL SESRNTEREL EMKLYSSEQD VVYMEEVTED AFSRWLEADN AAEVFKGTSK
301: EMSGKLQILQ FNLSGSFKRE DNLKSKLVDS KERLEAKECA LHKLDSSNAR LADFLVAQTE GLKESLQEAE EKLILLNTEN STLSEKVSSL EEQLNEYGIQ
401: TEDADATSGA LITDLERINE ELKDKLAKTE ARAEETESKC KILEESKKEL QDELGNFRDK GFTIHKLASL EKHLRDSDLQ LEHAVAAVEA SKEKQNLLYS
501: TVSDMEDVIE DLKSKVLKAE NRADITEEKL IMVSESNAEV NEELKFFKGR LKEGEKYLQQ AEERKLRTAK DIGVHNKIMK KLVMQLAAER ERLHKQITNL
601: SRENCVLMVK LKKVGKTGYM ESGNGSEVSP KSDQNASSCH QGSRLQATFI SLTNPEEEET GSKSDIGSVR RLDVGALRFK HILVAILVIL ISSIAYVISQ
701: QNM
Arabidopsis Description
WIT1WPP domain-interacting tail-anchored protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7E5]
SUBAcon: [golgi,nucleus,cytosol]
SUBAcon: [golgi,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.