Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G042800.1 | Wheat | cytosol | 83.01 | 88.38 |
| TraesCS7D01G038700.1 | Wheat | cytosol | 82.6 | 87.94 |
| TraesCSU01G064900.1 | Wheat | cytosol | 82.18 | 87.24 |
| Os05t0241000-01 | Rice | nucleus | 59.25 | 64.13 |
| KXG21620 | Sorghum | cytosol | 51.93 | 58.11 |
| HORVU3Hr1G057330.1 | Barley | cytosol | 47.38 | 51.58 |
| Zm00001d010047_P001 | Maize | plastid | 52.07 | 50.33 |
| GSMUA_Achr1P19080_001 | Banana | nucleus | 36.88 | 44.35 |
| GSMUA_Achr7P06030_001 | Banana | cytosol, golgi, nucleus | 37.85 | 41.27 |
| VIT_14s0083g00730.t01 | Wine grape | nucleus | 36.33 | 36.83 |
| KRG93747 | Soybean | nucleus | 27.76 | 36.55 |
| KRH18315 | Soybean | nucleus | 27.62 | 35.91 |
| PGSC0003DMT400068312 | Potato | cytosol, golgi, nucleus | 32.6 | 34.5 |
| Solyc02g065660.2.1 | Tomato | nucleus, plastid | 29.42 | 34.03 |
| KRH01441 | Soybean | cytosol | 29.97 | 33.38 |
| CDX69762 | Canola | nucleus | 28.18 | 31.14 |
| Bra008966.1-P | Field mustard | nucleus | 28.18 | 31.1 |
| CDX95976 | Canola | cytosol, peroxisome, plastid | 16.02 | 31.02 |
| CDX97101 | Canola | cytosol, golgi, nucleus | 27.9 | 30.61 |
| AT5G11390.1 | Thale cress | cytosol, golgi, nucleus | 29.56 | 30.44 |
| AT1G68910.1 | Thale cress | cytosol | 26.24 | 30.3 |
| PGSC0003DMT400050565 | Potato | cytosol, golgi, nucleus | 27.9 | 28.77 |
| CDY33569 | Canola | cytosol, golgi, peroxisome | 25.83 | 28.77 |
| CDX81573 | Canola | cytosol | 25.28 | 28.68 |
| Solyc05g010590.2.1 | Tomato | nucleus | 27.76 | 28.63 |
| CDY45838 | Canola | cytosol, golgi, nucleus | 25.41 | 28.57 |
| KRH75191 | Soybean | cytosol | 26.8 | 28.49 |
| VIT_01s0010g00750.t01 | Wine grape | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 28.87 | 28.44 |
| KRH71037 | Soybean | cytosol | 27.62 | 28.25 |
| Bra004347.1-P | Field mustard | cytosol | 26.11 | 28.17 |
| Bra038339.1-P | Field mustard | nucleus | 25.0 | 25.39 |
| CDX95975 | Canola | cytosol | 6.22 | 24.06 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G007940.7 | EnsemblPlantsGene:HORVU7Hr1G007940 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | ncoils:Coil |
| PANTHER:PTHR35705 | PANTHER:PTHR35705:SF6 | SEG:seg | SUPFAM:SSF57997 | TMHMM:TMhelix | UniParc:UPI000B463A36 |
| UniProt:A0A287VG17 | MapMan:20.4.2.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:10418381..10422627
Molecular Weight (calculated)
79730.9 Da
IEP (calculated)
4.510
GRAVY (calculated)
-0.506
Length
724 amino acids
Sequence
(BLAST)
(BLAST)
001: DGGGGGQIVV LRRRQEAAAA EQLSWSKQHR SCDSPPPLQP ASARGNAQGI MSAENTINDV QAQENALPPG DRMNAVGTNM ESLTRVELDL AFASEKLLNL
101: EMLVMEIARR ATDFEPLTLD SESVSSETAE NAFELDTLYG ILDAEVQELD DMISSLQIDA KNVEHKAYDE ESGGKVKAKL DAAMSSLKQM QDLIADIRKE
201: SAKFEKAIEF SSDQAGITED GVCENGHMPS GTSMHTEDQQ RNILQMLEQS IASEIDLEKK LSDSRYAVEE LQMKLHLQKQ ETYFLEELAE TNSGRLFEAE
301: NASEILLGTS RELINGLNSM QVQLSASSSR ENDLTSKLER SLKELSSLKL NQEKMQEESK KVETEEAVQN EAQSTPELLS LQHQVEELEK HFRESNSQLL
401: LEKVSAEVSQ EKENLTLTEL STLESVIKNL KADVLRAENR AQNAEVRCMQ LTKDNVELSR ELSSLKSQGS DKARLLEREL MESNGQLEHA KASVAAFAEQ
501: QGMLKSTVSD MEHMIEDLKG KVSKSETRAL KAESKCTLLT DTNLELSEEL SFLRGRVESL ESSLHEANHV KVSTIKDIGL RTKVITELVT KLAMERERLH
601: LQISMLTKKN KILAHKSKGS SVKDGTKLYE NATGKDAELQ FTTLAEEIVS DSSSAQNVAE KAADLTDGRV GAEESTGDEE DSADEGVLRT IKPSSALSWK
701: YVATALLAVV AAVVVCHLLL EGGA
101: EMLVMEIARR ATDFEPLTLD SESVSSETAE NAFELDTLYG ILDAEVQELD DMISSLQIDA KNVEHKAYDE ESGGKVKAKL DAAMSSLKQM QDLIADIRKE
201: SAKFEKAIEF SSDQAGITED GVCENGHMPS GTSMHTEDQQ RNILQMLEQS IASEIDLEKK LSDSRYAVEE LQMKLHLQKQ ETYFLEELAE TNSGRLFEAE
301: NASEILLGTS RELINGLNSM QVQLSASSSR ENDLTSKLER SLKELSSLKL NQEKMQEESK KVETEEAVQN EAQSTPELLS LQHQVEELEK HFRESNSQLL
401: LEKVSAEVSQ EKENLTLTEL STLESVIKNL KADVLRAENR AQNAEVRCMQ LTKDNVELSR ELSSLKSQGS DKARLLEREL MESNGQLEHA KASVAAFAEQ
501: QGMLKSTVSD MEHMIEDLKG KVSKSETRAL KAESKCTLLT DTNLELSEEL SFLRGRVESL ESSLHEANHV KVSTIKDIGL RTKVITELVT KLAMERERLH
601: LQISMLTKKN KILAHKSKGS SVKDGTKLYE NATGKDAELQ FTTLAEEIVS DSSSAQNVAE KAADLTDGRV GAEESTGDEE DSADEGVLRT IKPSSALSWK
701: YVATALLAVV AAVVVCHLLL EGGA
001: METETEHDRT VSVDDNDSLV PEPSSTKESF FEDLSLTGQV MNPQLSSAGE VLTKVELDFA FVSEKLVNLS LLTMQLGTRE NDFESFVSKK EEDEEEPSSN
101: VDDDDDSAEK ALEFDLLSSI LNSEVKELES LLGFLQNEIQ SARVMISPFQ HDGEAFLDLE GKLNDTEQSL GQLMEQVVEM KKQSSNFQRL SSGLDEQGSW
201: SGGQTSVSQN DGEFGDLSAK INMQTADQQR NVLRMLEKSL AKEMELEKKL SESRNTEREL EMKLYSSEQD VVYMEEVTED AFSRWLEADN AAEVFKGTSK
301: EMSGKLQILQ FNLSGSFKRE DNLKSKLVDS KERLEAKECA LHKLDSSNAR LADFLVAQTE GLKESLQEAE EKLILLNTEN STLSEKVSSL EEQLNEYGIQ
401: TEDADATSGA LITDLERINE ELKDKLAKTE ARAEETESKC KILEESKKEL QDELGNFRDK GFTIHKLASL EKHLRDSDLQ LEHAVAAVEA SKEKQNLLYS
501: TVSDMEDVIE DLKSKVLKAE NRADITEEKL IMVSESNAEV NEELKFFKGR LKEGEKYLQQ AEERKLRTAK DIGVHNKIMK KLVMQLAAER ERLHKQITNL
601: SRENCVLMVK LKKVGKTGYM ESGNGSEVSP KSDQNASSCH QGSRLQATFI SLTNPEEEET GSKSDIGSVR RLDVGALRFK HILVAILVIL ISSIAYVISQ
701: QNM
101: VDDDDDSAEK ALEFDLLSSI LNSEVKELES LLGFLQNEIQ SARVMISPFQ HDGEAFLDLE GKLNDTEQSL GQLMEQVVEM KKQSSNFQRL SSGLDEQGSW
201: SGGQTSVSQN DGEFGDLSAK INMQTADQQR NVLRMLEKSL AKEMELEKKL SESRNTEREL EMKLYSSEQD VVYMEEVTED AFSRWLEADN AAEVFKGTSK
301: EMSGKLQILQ FNLSGSFKRE DNLKSKLVDS KERLEAKECA LHKLDSSNAR LADFLVAQTE GLKESLQEAE EKLILLNTEN STLSEKVSSL EEQLNEYGIQ
401: TEDADATSGA LITDLERINE ELKDKLAKTE ARAEETESKC KILEESKKEL QDELGNFRDK GFTIHKLASL EKHLRDSDLQ LEHAVAAVEA SKEKQNLLYS
501: TVSDMEDVIE DLKSKVLKAE NRADITEEKL IMVSESNAEV NEELKFFKGR LKEGEKYLQQ AEERKLRTAK DIGVHNKIMK KLVMQLAAER ERLHKQITNL
601: SRENCVLMVK LKKVGKTGYM ESGNGSEVSP KSDQNASSCH QGSRLQATFI SLTNPEEEET GSKSDIGSVR RLDVGALRFK HILVAILVIL ISSIAYVISQ
701: QNM
Arabidopsis Description
WIT1WPP domain-interacting tail-anchored protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7E5]
SUBAcon: [golgi,nucleus,cytosol]
SUBAcon: [golgi,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.