CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71426	Soybean	nucleus	93.26	93.43
VIT_07s0104g00520.t01	Wine grape	plastid	75.09	74.12
PGSC0003DMT400086322	Potato	cytosol	70.04	70.04
Solyc09g065190.1.1	Tomato	plastid	69.85	69.85
KRG91256	Soybean	endoplasmic reticulum	69.48	69.74
KRH35557	Soybean	endoplasmic reticulum, nucleus	67.98	68.11
TraesCS1B01G266900.1	Wheat	plastid	65.73	63.7
Os05t0543200-01	Rice	plasma membrane	64.79	63.6
GSMUA_Achr11P...	Banana	cytosol, plastid	65.17	63.5
TraesCS1A01G256200.1	Wheat	cytosol	65.36	63.45
TraesCS1D01G255600.1	Wheat	cytosol, plastid	65.92	63.42
Zm00001d017239_P001	Maize	mitochondrion, plasma membrane	61.42	62.72
EES05430	Sorghum	cytosol, nucleus, plastid	63.67	62.62
TraesCS3D01G394300.1	Wheat	cytosol, plastid	64.61	62.27
TraesCS3B01G433100.1	Wheat	cytosol, plastid	64.61	62.27
Zm00001d051112_P001	Maize	plasma membrane	59.93	62.02
EES05435	Sorghum	cytosol, plastid	64.61	61.83
HORVU3Hr1G090080.1	Barley	plastid	63.86	61.55
EES07543	Sorghum	cytosol	28.28	60.16
TraesCS3A01G400100.1	Wheat	plastid	64.61	58.57
HORVU1Hr1G063300.3	Barley	plastid	66.1	54.06
Zm00001d052426_P001	Maize	cytosol	13.67	53.28
Zm00001d034691_P001	Maize	cytosol	35.21	49.47
GSMUA_Achr8P13660_001	Banana	cytosol	53.0	46.24
Bra020034.1-P	Field mustard	cytosol	21.16	45.94
CDY44911	Canola	cytosol	21.16	45.02
Os05t0409200-00	Rice	cytosol	8.05	40.19
Zm00001d043604_P002	Maize	cytosol	32.02	31.84
Zm00001d046105_P001	Maize	peroxisome	32.4	29.42
KRH69472	Soybean	nucleus	20.41	17.99
KRH74682	Soybean	plastid	19.48	17.16

Protein Annotations

Gene3D:1.10.246.200	EntrezGene:100819800	MapMan:23.5.1.5	Gene3D:3.80.10.10	EMBL:ACUP02006093	EnsemblPlantsGene:GLYMA_10G026700
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:IPR038214
UniProt:K7LH21	ProteinID:KRH32019.1	EnsemblPlants:KRH32020	ProteinID:KRH32020	ProteinID:KRH32020.1	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	PFAM:PF13516	PFAM:PF13943	PANTHER:PTHR24106	PANTHER:PTHR24106:SF248	SMART:SM00368
SUPFAM:SSF52047	UniParc:UPI000233C95C	InterPro:WPP_dom	InterPro:WPP_sf	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:2325884..2328541

Molecular Weight (calculated)

57869.3 Da

IEP (calculated)

4.372

GRAVY (calculated)

-0.279

Length

534 amino acids

Sequence
(BLAST)

001: MDSTGQAYQH RPLTIKLWPP SQSTRLMLVE RMTKNLTTPS IFSRKYGLLS KEEAEEDAKH IENVAFATAT QHFEKEPDGD GSSAVQIYAK ESSKLMLEAL
101: KRGPKAKEDG ELINEKAAGA TAETVFDISG GRRDFISGEE TAELLKPLTG PSSYNKICFS NRSFGLDAAR VAEPILLSVK DQLKEVDLSD FIAGRPEAEA
201: LEVMTIFSSA LEGSVLRYLN LSNNAMGEKG VRAFRSLLKS QINLEELYLM NDGISEEAAK AVSELLPSTE KLRVLHFHNN MTGDEGAIAI AEIVKRSPAL
301: EDFRCSSTRV GSDGGVALVE ALGDCKHLRK LDLRDNMFGE EAGVALSKVV PAFTDLTEIY LSYLNLEDDG AEALANALKE SAPSLEILDL AGNDITAKAA
401: ASVAACISSK QFLTKLNLSE NELKDEGVVL ISKALEGGHG QLIEVDLSTN SITWSGAKLV AEAVVGKPGF KLLNINANFI SDEGIDELKN IFKNSPDMLG
501: PLDENNPDGE DPDEEAEEDA DHDELESKLK GLDI

Best Arabidopsis Sequence Match ( AT3G63130.2 )
(BLAST)

001: MDHSAKTTQN RVLSVKMWPP SKSTRLMLVE RMTKNITTPS IFSRKYGLLS VEEAEQDAKR IEDLAFATAN KHFQNEPDGD GTSAVHVYAK ESSKLMLDVI
101: KRGPQEESEV EVSKDGDVFF DISGGSRAFI EEEEARDLLR PLADPRNSYT KIRFSNRSFG SEAAKFAASV LSSIKDQLTE VDLSDFVAGR PEAEALEVMN
201: MFSSALEGSK LRYLNLSDNA LGEKGIRAFA SLINSQHDLE ELYLMNDGIS EDAARAVREL LPSTDKIRVL QFHNNMTGDE GATAIAEIVR ECPSLEDFRC
301: SSTRIGSEGG VALAEALEHC SHLKKLDLRD NMFGVEGGIA LAKTLSVLTH LTEIYMSYLN LEDEGTEALS EALLKSAPSL EVLELAGNDI TVKSTGNLAA
401: CIASKQSLAK LNLSENELKD EGTILIAKAV EGHDQLVEVD LSTNMIRRAG ARALAQTVVK KNTFKLLNIN GNFISEEGID EVNDMFKDCL DKLVPLDDND
501: PEGEDFEDED EEEEGEDGNE LESKLGSLKI KQGEE

Arabidopsis Description

RANGAP1RAN GTPase-activating protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE82]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.