Factsheet for Bra020034.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44911	Canola	cytosol	88.62	86.85
KRH71426	Soybean	nucleus	46.75	21.58
KRH32020	Soybean	cytosol	45.94	21.16
Zm00001d051112_P001	Maize	plasma membrane	43.09	20.54
Zm00001d017239_P001	Maize	mitochondrion, plasma membrane	43.09	20.27
HORVU3Hr1G090080.1	Barley	plastid	45.53	20.22
TraesCS3D01G394300.1	Wheat	cytosol, plastid	45.53	20.22
VIT_07s0104g00520.t01	Wine grape	plastid	44.31	20.15
GSMUA_Achr11P...	Banana	cytosol, plastid	44.72	20.07
TraesCS3B01G433100.1	Wheat	cytosol, plastid	45.12	20.04
TraesCS1B01G266900.1	Wheat	plastid	44.72	19.96
EES05430	Sorghum	cytosol, nucleus, plastid	43.9	19.89
TraesCS1D01G255600.1	Wheat	cytosol, plastid	44.72	19.82
TraesCS1A01G256200.1	Wheat	cytosol	44.31	19.82
Os05t0543200-01	Rice	plasma membrane	43.5	19.67
EES05435	Sorghum	cytosol, plastid	44.31	19.53
PGSC0003DMT400086322	Potato	cytosol	42.28	19.48
TraesCS3A01G400100.1	Wheat	plastid	45.94	19.19
Solyc09g065190.1.1	Tomato	plastid	41.46	19.1
Bra007730.1-P	Field mustard	cytosol, plastid	40.65	18.69
Zm00001d034691_P001	Maize	cytosol	28.46	18.42
Bra040432.1-P	Field mustard	plastid	39.43	18.1
Zm00001d043604_P002	Maize	cytosol	37.4	17.13
HORVU1Hr1G063300.3	Barley	plastid	43.9	16.54
Zm00001d046105_P001	Maize	peroxisome	38.21	15.99
EES07543	Sorghum	cytosol	14.23	13.94
GSMUA_Achr8P13660_001	Banana	cytosol	33.74	13.56
Zm00001d052426_P001	Maize	cytosol	6.5	11.68
Bra013834.1-P	Field mustard	cytosol	4.88	9.09
Bra026911.1-P	Field mustard	cytosol	4.88	9.09
Bra020788.1-P	Field mustard	cytosol, mitochondrion	8.54	8.9
Bra019926.1-P	Field mustard	plastid	20.73	8.54
Os05t0409200-00	Rice	cytosol	3.66	8.41
Bra018435.1-P	Field mustard	plastid	19.11	7.86

Protein Annotations

EnsemblPlants:Bra020034.1	EnsemblPlants:Bra020034.1-P	EnsemblPlantsGene:Bra020034	Gene3D:3.80.10.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR24106	PANTHER:PTHR24106:SF248	SEG:seg
SMART:SM00368	SUPFAM:SSF52047	TMHMM:TMhelix	UniParc:UPI0002543276	UniProt:M4DU41	MapMan:35.1

Description

AT5G19320 (E=1e-042) RANGAP2 | RANGAP2 (RAN GTPASE ACTIVATING PROTEIN 2); RAN GTPase activator

Coordinates

chrA02:-:4731024..4734466

Molecular Weight (calculated)

27827.2 Da

IEP (calculated)

4.309

GRAVY (calculated)

-0.153

Length

246 amino acids

Sequence
(BLAST)

001: MARSNFSLIC SFEEYLGRFP THPMVILKLN SPYPQCSNDE AQKFSLICFS NRSFGLGAAR VAEPILASLK HQLKVEALDV MNLFSNALQG NVLSSLNLSD
101: NALGEKGVRA FGTLLNSLSS LEELYLMNDG ISKEAAQAVS ELIPSTEKLR VLHFHNLLNI DGNIISEEGV EEVREIFKKK PELLGDLDEN DPDEEDEEDY
201: ELESKLKNLE VNEDDYVFVM FVLFSVLFVL LYQDYLNVLT KNKQKY

Best Arabidopsis Sequence Match ( AT5G19320.2 )
(BLAST)

001: MADILDSRPH AFSIKLWPPS LPTRKALIER ITNNFSSKTI FTEKYGSLTK DQATENAKRI EDIAFSTANQ QFEREPDGDG GSAVQLYAKE CSKLILEVLK
101: KGPVAKVAAR ELISEDSVSP RETFFDISKG KRAFIEAEEA EELLKPLKEP GNAYTKICFS NRSFGLGAAR VAEPILASLK DQLKEVDLSD FVAGRPELEA
201: LEVMNIFSDA LQGSILSSLN LSDNALGEKG VRAFGALLKS LSSLEELYLM NDGISKEAAQ AVSELIPSTE NLRVLHFHNN MTGDEGALAI AEVVKRSPLL
301: ENFRCSSTRV GSKGGIALSE ALEHCTHMEK LDLRDNMFGT EAGVSLSKTL SSFKHMTELY LSYLNLEDEG AIAIVNALKE SASPIEVLEM AGNDITVEAA
401: SAIAACVAAK QDLNKLNLSE NELKDEGCVQ IANCIEEGHS KLQYIDMSTN YIRRAGARAL AHVVVKKEAF KLLNIDGNII SEEGIEELKE IFKKSPELLG
501: ALDENDPDGE EDDDDEEDEE DEENEGNGNG ELESKLKNLE VNQED

Arabidopsis Description

RANGAP2RANGAP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UQD1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.