Factsheet for Bra007730.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56462	Canola	cytosol, plastid	99.25	99.25
Bra013834.1-P	Field mustard	cytosol	22.43	90.91
Bra040432.1-P	Field mustard	plastid	82.62	82.46
GSMUA_Achr11P...	Banana	cytosol, plastid	62.06	60.58
Os05t0543200-01	Rice	plasma membrane	61.5	60.48
Zm00001d051112_P001	Maize	plasma membrane	58.32	60.47
Zm00001d017239_P001	Maize	mitochondrion, plasma membrane	58.5	59.85
EES05430	Sorghum	cytosol, nucleus, plastid	60.56	59.67
TraesCS1B01G266900.1	Wheat	plastid	60.93	59.17
TraesCS1A01G256200.1	Wheat	cytosol	60.56	58.91
TraesCS1D01G255600.1	Wheat	cytosol, plastid	60.75	58.56
TraesCS3B01G433100.1	Wheat	cytosol, plastid	59.81	57.76
EES05435	Sorghum	cytosol, plastid	60.19	57.71
TraesCS3D01G394300.1	Wheat	cytosol, plastid	59.63	57.58
HORVU3Hr1G090080.1	Barley	plastid	59.25	57.22
EES07543	Sorghum	cytosol	26.73	56.97
TraesCS3A01G400100.1	Wheat	plastid	59.81	54.33
Zm00001d052426_P001	Maize	cytosol	13.46	52.55
Bra026911.1-P	Field mustard	cytosol	12.9	52.27
HORVU1Hr1G063300.3	Barley	plastid	59.81	49.0
Zm00001d034691_P001	Maize	cytosol	32.9	46.32
GSMUA_Achr8P13660_001	Banana	cytosol	48.41	42.32
Bra020034.1-P	Field mustard	cytosol	18.69	40.65
Os05t0409200-00	Rice	cytosol	7.66	38.32
Bra020788.1-P	Field mustard	cytosol, mitochondrion	15.33	34.75
Zm00001d043604_P002	Maize	cytosol	29.35	29.24
Zm00001d046105_P001	Maize	peroxisome	29.53	26.87
Bra019926.1-P	Field mustard	plastid	18.69	16.75
Bra018435.1-P	Field mustard	plastid	17.94	16.05

Protein Annotations

Gene3D:1.10.246.200	MapMan:23.5.1.5	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra007730	EnsemblPlants:Bra007730.1	EnsemblPlants:Bra007730.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675
InterPro:IPR038214	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M4CU36	PFAM:PF13516	PFAM:PF13943
PANTHER:PTHR24106	PANTHER:PTHR24106:SF248	SMART:SM00368	SUPFAM:SSF52047	UniParc:UPI0002542BA1	InterPro:WPP_dom
InterPro:WPP_sf	SEG:seg	:	:	:	:

Description

AT3G63130 (E=1e-219) RANGAP1 | RANGAP1 (RAN GTPASE ACTIVATING PROTEIN 1); RAN GTPase activator/ protein binding

Coordinates

chrA09:+:30599364..30600971

Molecular Weight (calculated)

58350.8 Da

IEP (calculated)

4.251

GRAVY (calculated)

-0.353

Length

535 amino acids

Sequence
(BLAST)

001: MDHSVKTPPV LSVKMWPPSK STRLMLVDRM TKNITTPSIF SRKYGLLSLQ EAEEDAKRIE ELAFATANKH FQSEPDADGT SAVHVYAKES SKLMLEVIKR
101: GPQQVDSEAE GNVDGDTLFD LSGGRRAFID LEEARELLRP LAEPNNSFTK IRFSNRSFGS EAAKFAVGVL SSVKDQLTEV DLSDFVAGRP EAEALEVMTM
201: FSSALEGSNL RSLNLSDNAL GEKGIRAFAS LIKSQRGLEE LYLMNDGISE DAARAVRELL PSTGEIRVLQ FHNNMTGDEG AIAIAEIVKQ CPSLEDFRCS
301: STRIGSDGGV ALAEALASCS RLKKLDLRDN MFGVEGGVAL AETLSVLSEL TEIYMSYLNL EDEGAEALSE ALVKSAPRLE VIELAGNDVT VKAAGKLAEC
401: IASKESLSKL NLSENELKDE GTILIAKALE EGHDQLTEVD LSTNMMRRAG ARALAQTVLK KPTLKLLNIN GNFISEEGVD EVSDMFKDSP DKLGPLDDND
501: PEGEDFEDED EEEEGEEESE LEAKLGGLKI KQEEE

Best Arabidopsis Sequence Match ( AT3G63130.2 )
(BLAST)

001: MDHSAKTTQN RVLSVKMWPP SKSTRLMLVE RMTKNITTPS IFSRKYGLLS VEEAEQDAKR IEDLAFATAN KHFQNEPDGD GTSAVHVYAK ESSKLMLDVI
101: KRGPQEESEV EVSKDGDVFF DISGGSRAFI EEEEARDLLR PLADPRNSYT KIRFSNRSFG SEAAKFAASV LSSIKDQLTE VDLSDFVAGR PEAEALEVMN
201: MFSSALEGSK LRYLNLSDNA LGEKGIRAFA SLINSQHDLE ELYLMNDGIS EDAARAVREL LPSTDKIRVL QFHNNMTGDE GATAIAEIVR ECPSLEDFRC
301: SSTRIGSEGG VALAEALEHC SHLKKLDLRD NMFGVEGGIA LAKTLSVLTH LTEIYMSYLN LEDEGTEALS EALLKSAPSL EVLELAGNDI TVKSTGNLAA
401: CIASKQSLAK LNLSENELKD EGTILIAKAV EGHDQLVEVD LSTNMIRRAG ARALAQTVVK KNTFKLLNIN GNFISEEGID EVNDMFKDCL DKLVPLDDND
501: PEGEDFEDED EEEEGEDGNE LESKLGSLKI KQGEE

Arabidopsis Description

RANGAP1RAN GTPase-activating protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE82]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.