Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69472 | Soybean | nucleus | 96.04 | 96.04 |
| VIT_01s0026g00610.t01 | Wine grape | mitochondrion | 63.7 | 77.2 |
| CDY20954 | Canola | plastid | 62.87 | 63.29 |
| CDY55048 | Canola | plastid | 62.05 | 62.98 |
| Bra019926.1-P | Field mustard | plastid | 61.88 | 62.81 |
| CDX93413 | Canola | plastid | 61.88 | 62.81 |
| CDY20626 | Canola | plastid | 60.89 | 61.81 |
| Bra018435.1-P | Field mustard | plastid | 60.73 | 61.54 |
| AT1G10510.1 | Thale cress | plastid | 60.73 | 60.83 |
| GSMUA_Achr9P28160_001 | Banana | plastid | 61.22 | 60.13 |
| PGSC0003DMT400040302 | Potato | plastid | 59.9 | 59.61 |
| Solyc05g006170.2.1 | Tomato | plastid | 59.9 | 59.51 |
| Os06t0237502-00 | Rice | plastid | 52.48 | 51.79 |
| TraesCS7B01G100000.1 | Wheat | plastid | 51.65 | 51.06 |
| TraesCS7A01G194400.1 | Wheat | plastid | 51.49 | 50.73 |
| TraesCS7D01G196000.1 | Wheat | plastid | 50.99 | 50.33 |
| KXG19681 | Sorghum | plastid | 54.46 | 50.15 |
| Zm00001d044774_P004 | Maize | plastid | 53.14 | 49.61 |
| HORVU7Hr1G039610.2 | Barley | cytosol, peroxisome, plastid | 51.32 | 49.13 |
| KRH71426 | Soybean | nucleus | 17.16 | 19.51 |
| KRH32020 | Soybean | cytosol | 17.16 | 19.48 |
| KRH35557 | Soybean | endoplasmic reticulum, nucleus | 16.5 | 18.76 |
| KRG91256 | Soybean | endoplasmic reticulum | 16.17 | 18.42 |
Protein Annotations
| EMBL:ACUP02000061 | EnsemblPlants:KRH74682 | EnsemblPlantsGene:GLYMA_01G036200 | EntrezGene:100789448 | Gene3D:3.80.10.10 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt |
| PFAM:PF13516 | ProteinID:KRH74682 | ProteinID:KRH74682.1 | SEG:seg | SMART:SM00368 | SUPFAM:SSF52047 |
| UniParc:UPI0002337512 | UniProt:A0A0R0L625 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:3791668..3811421
Molecular Weight (calculated)
65116.0 Da
IEP (calculated)
8.205
GRAVY (calculated)
-0.040
Length
606 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFTSTLSLY SHPQVRLRCQ RLQSLAFTAA GVAQFAPLPP LNCRRTCSPR SFVVRASSSV EGSRARAGGS RRVYRQSQAN APLSSAPVKQ IANVVAPVAA
101: FFALTFVIWK LVEKLLVPTP KQLKYSTGES QSPSQGLKWS FAAGTNLLSQ LGEKIERQSR QKLNEFAREL RSFPSIDMSG RNFGDEGLFF LAESLAFNQI
201: AEEVSFAANG ITAAGLRAFD GVLQSNITLK TLDLSGNLVG DEGAKCLCDI LVNNSSIEKL QLNSADLGDV GAKAIAEMLK KNSSLRVLEL NNNMIEYSGF
301: SSLAGALLEN NSIRNIHLNG NYGGALGANA LAKALESNKS IRELHLHGNS IGDEGICSLM TGLSSHKGKL TLLDIGNNSL TAKGSFHVAE YIRKSRNLLW
401: LNLYMNDIGD EGAEKIAVAL KENRSISTLD LGGNNIHVDG VNAIAQVLKD NLVITTLELS YNPIGPDGAK ALAEVLKFHG NIKTLKLGWC QIGAKGAECI
501: ADALKYNTTI SILDLRANGL RDEGAQSLAR SLKVVNEALT SLDLGFNEIR DDGAFAIAQA LKSNDDVAVT SLNIASNFLT KFGQGALADA RDHVLEMTEK
601: EINIFL
101: FFALTFVIWK LVEKLLVPTP KQLKYSTGES QSPSQGLKWS FAAGTNLLSQ LGEKIERQSR QKLNEFAREL RSFPSIDMSG RNFGDEGLFF LAESLAFNQI
201: AEEVSFAANG ITAAGLRAFD GVLQSNITLK TLDLSGNLVG DEGAKCLCDI LVNNSSIEKL QLNSADLGDV GAKAIAEMLK KNSSLRVLEL NNNMIEYSGF
301: SSLAGALLEN NSIRNIHLNG NYGGALGANA LAKALESNKS IRELHLHGNS IGDEGICSLM TGLSSHKGKL TLLDIGNNSL TAKGSFHVAE YIRKSRNLLW
401: LNLYMNDIGD EGAEKIAVAL KENRSISTLD LGGNNIHVDG VNAIAQVLKD NLVITTLELS YNPIGPDGAK ALAEVLKFHG NIKTLKLGWC QIGAKGAECI
501: ADALKYNTTI SILDLRANGL RDEGAQSLAR SLKVVNEALT SLDLGFNEIR DDGAFAIAQA LKSNDDVAVT SLNIASNFLT KFGQGALADA RDHVLEMTEK
601: EINIFL
001: MASSSTSSLN LHSLPKASSG LGQWKSGFRY ELLGSSVSRN RLFVSPVVIH HRSPRLPAIK AAYNSDGGSK RSRVYKESQA ASGFPNAKVQ QIASSVLPLG
101: SFAVVTFVLW KVVGKFMSPK SPKTSAGENN SSTQGVKWSI GAGTNLLQGF AAKVDREAKQ RLNEFAKELR SFRSVDMSGC NFGDEGLFFL AESLGYNQTV
201: EEVSFSANGI TAAGVKAFDG VLQSNIMLKI LNLSGNPIGD EGAKTLCATL MENSSIEILQ LNSTDIGDEG AKEIAELLKR NSTLRIIELN NNMIDYSGFT
301: SLAGALLENN TIRNLHLNGN YGGALGANAL AKGLEGNKSL RELHLHGNSI GDEGTRALMA GLSSHKGKVA LLDLGNNSIS AKGAFYVAEY IKRSKSLVWL
401: NLYMNDIGDE GAEKIADSLK QNRSIATIDL GGNNIHAEGV NAIAQALKDN AIITTLEVGY NPIGPDGAKA LSEILKFHGN VKTLKLGWCQ IAAKGAEHVA
501: DMLRYNNTIS VLDLRANGLR DEGASCLARS LKVVNEALTS VDLGFNEIRD DGAFAIAQAL KANEDVTVTS INLGNNFITK FGQSALTDAR DHVLEMTEKE
601: VEIFF
101: SFAVVTFVLW KVVGKFMSPK SPKTSAGENN SSTQGVKWSI GAGTNLLQGF AAKVDREAKQ RLNEFAKELR SFRSVDMSGC NFGDEGLFFL AESLGYNQTV
201: EEVSFSANGI TAAGVKAFDG VLQSNIMLKI LNLSGNPIGD EGAKTLCATL MENSSIEILQ LNSTDIGDEG AKEIAELLKR NSTLRIIELN NNMIDYSGFT
301: SLAGALLENN TIRNLHLNGN YGGALGANAL AKGLEGNKSL RELHLHGNSI GDEGTRALMA GLSSHKGKVA LLDLGNNSIS AKGAFYVAEY IKRSKSLVWL
401: NLYMNDIGDE GAEKIADSLK QNRSIATIDL GGNNIHAEGV NAIAQALKDN AIITTLEVGY NPIGPDGAKA LSEILKFHGN VKTLKLGWCQ IAAKGAEHVA
501: DMLRYNNTIS VLDLRANGLR DEGASCLARS LKVVNEALTS VDLGFNEIRD DGAFAIAQAL KANEDVTVTS INLGNNFITK FGQSALTDAR DHVLEMTEKE
601: VEIFF
Arabidopsis Description
emb2004RNI-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q93ZV8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.