Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93931 | Canola | cytosol | 54.02 | 85.5 |
| Bra040432.1-P | Field mustard | plastid | 80.56 | 80.41 |
| CDX89174 | Canola | plastid | 80.56 | 79.96 |
| CDX93932 | Canola | cytosol | 14.21 | 66.09 |
| Os05t0543200-01 | Rice | plasma membrane | 62.8 | 61.76 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 61.68 | 60.22 |
| AT5G19320.1 | Thale cress | cytosol | 61.31 | 60.18 |
| Zm00001d017239_P001 | Maize | mitochondrion, plasma membrane | 58.32 | 59.66 |
| TraesCS1A01G256200.1 | Wheat | cytosol | 60.93 | 59.27 |
| EES05430 | Sorghum | cytosol, nucleus, plastid | 60.0 | 59.12 |
| TraesCS1B01G266900.1 | Wheat | plastid | 60.56 | 58.8 |
| Zm00001d051112_P001 | Maize | plasma membrane | 56.45 | 58.53 |
| TraesCS1D01G255600.1 | Wheat | cytosol, plastid | 60.37 | 58.2 |
| EES05435 | Sorghum | cytosol, plastid | 60.19 | 57.71 |
| TraesCS3B01G433100.1 | Wheat | cytosol, plastid | 59.63 | 57.58 |
| TraesCS3D01G394300.1 | Wheat | cytosol, plastid | 59.63 | 57.58 |
| HORVU3Hr1G090080.1 | Barley | plastid | 58.5 | 56.5 |
| EES07543 | Sorghum | cytosol | 26.36 | 56.18 |
| TraesCS3A01G400100.1 | Wheat | plastid | 59.81 | 54.33 |
| Zm00001d052426_P001 | Maize | cytosol | 13.27 | 51.82 |
| HORVU1Hr1G063300.3 | Barley | plastid | 60.37 | 49.46 |
| Zm00001d034691_P001 | Maize | cytosol | 32.71 | 46.05 |
| GSMUA_Achr8P13660_001 | Banana | cytosol | 48.41 | 42.32 |
| AT3G06000.1 | Thale cress | cytosol | 16.26 | 41.23 |
| Os05t0409200-00 | Rice | cytosol | 7.85 | 39.25 |
| Zm00001d043604_P002 | Maize | cytosol | 28.97 | 28.86 |
| Zm00001d046105_P001 | Maize | peroxisome | 30.28 | 27.55 |
| AT1G10510.1 | Thale cress | plastid | 19.07 | 16.86 |
Protein Annotations
| Gene3D:1.10.246.200 | MapMan:23.5.1.5 | Gene3D:3.80.10.10 | EntrezGene:825488 | ProteinID:AEE80438.1 | ProteinID:AEE80439.1 |
| EMBL:AF214559 | ArrayExpress:AT3G63130 | EnsemblPlantsGene:AT3G63130 | RefSeq:AT3G63130 | TAIR:AT3G63130 | RefSeq:AT3G63130-TAIR-G |
| EnsemblPlants:AT3G63130.1 | TAIR:AT3G63130.1 | EMBL:AY034918 | EMBL:AY150448 | Unigene:At.48804 | ProteinID:CAB87758.1 |
| GO:GO:0000911 | GO:GO:0003674 | GO:GO:0005096 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005737 | GO:GO:0005819 |
| GO:GO:0005856 | GO:GO:0005886 | GO:GO:0006606 | GO:GO:0006810 | GO:GO:0007049 | GO:GO:0008150 |
| GO:GO:0009504 | GO:GO:0009507 | GO:GO:0009524 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0030234 | GO:GO:0031965 | GO:GO:0032153 | GO:GO:0043547 | InterPro:IPR001611 | InterPro:IPR032675 |
| InterPro:IPR038214 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | RefSeq:NP_001190166.1 | RefSeq:NP_191872.1 | PFAM:PF13516 |
| PFAM:PF13943 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR24106 | PANTHER:PTHR24106:SF248 | UniProt:Q9LE82 |
| Symbol:RANGAP1 | SMART:SM00368 | SUPFAM:SSF52047 | UniParc:UPI00000ABF08 | InterPro:WPP_dom | InterPro:WPP_sf |
| SEG:seg | : | : | : | : | : |
Description
RANGAP1RAN GTPase-activating protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE82]
Coordinates
chr3:+:23324479..23326913
Molecular Weight (calculated)
58830.1 Da
IEP (calculated)
4.342
GRAVY (calculated)
-0.394
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHSAKTTQN RVLSVKMWPP SKSTRLMLVE RMTKNITTPS IFSRKYGLLS VEEAEQDAKR IEDLAFATAN KHFQNEPDGD GTSAVHVYAK ESSKLMLDVI
101: KRGPQEESEV EVSKDGDVFF DISGGSRAFI EEEEARDLLR PLADPRNSYT KIRFSNRSFG SEAAKFAASV LSSIKDQLTE VDLSDFVAGR PEAEALEVMN
201: MFSSALEGSK LRYLNLSDNA LGEKGIRAFA SLINSQHDLE ELYLMNDGIS EDAARAVREL LPSTDKIRVL QFHNNMTGDE GATAIAEIVR ECPSLEDFRC
301: SSTRIGSEGG VALAEALEHC SHLKKLDLRD NMFGVEGGIA LAKTLSVLTH LTEIYMSYLN LEDEGTEALS EALLKSAPSL EVLELAGNDI TVKSTGNLAA
401: CIASKQSLAK LNLSENELKD EGTILIAKAV EGHDQLVEVD LSTNMIRRAG ARALAQTVVK KNTFKLLNIN GNFISEEGID EVNDMFKDCL DKLVPLDDND
501: PEGEDFEDED EEEEGEDGNE LESKLGSLKI KQGEE
101: KRGPQEESEV EVSKDGDVFF DISGGSRAFI EEEEARDLLR PLADPRNSYT KIRFSNRSFG SEAAKFAASV LSSIKDQLTE VDLSDFVAGR PEAEALEVMN
201: MFSSALEGSK LRYLNLSDNA LGEKGIRAFA SLINSQHDLE ELYLMNDGIS EDAARAVREL LPSTDKIRVL QFHNNMTGDE GATAIAEIVR ECPSLEDFRC
301: SSTRIGSEGG VALAEALEHC SHLKKLDLRD NMFGVEGGIA LAKTLSVLTH LTEIYMSYLN LEDEGTEALS EALLKSAPSL EVLELAGNDI TVKSTGNLAA
401: CIASKQSLAK LNLSENELKD EGTILIAKAV EGHDQLVEVD LSTNMIRRAG ARALAQTVVK KNTFKLLNIN GNFISEEGID EVNDMFKDCL DKLVPLDDND
501: PEGEDFEDED EEEEGEDGNE LESKLGSLKI KQGEE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.