Subcellular Localization
min:
: max
Winner_takes_all: golgi, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43354 | Canola | cytosol, golgi, nucleus | 90.25 | 90.48 |
| Bra001502.1-P | Field mustard | nucleus, plastid | 58.25 | 52.71 |
| AT3G13360.2 | Thale cress | extracellular, plasma membrane, vacuole | 55.25 | 42.66 |
| Bra026434.1-P | Field mustard | nucleus | 29.0 | 23.43 |
| VIT_19s0015g01790.t01 | Wine grape | nucleus | 33.75 | 21.99 |
| Bra002835.1-P | Field mustard | cytosol, golgi, nucleus | 15.0 | 21.74 |
| KRH62532 | Soybean | endoplasmic reticulum | 31.25 | 21.37 |
| PGSC0003DMT400022426 | Potato | nucleus | 30.5 | 20.82 |
| KRH56393 | Soybean | cytosol | 30.25 | 20.61 |
| Os04t0471300-01 | Rice | cytosol, golgi, nucleus | 15.5 | 20.53 |
| TraesCS2B01G351300.1 | Wheat | cytosol, golgi, nucleus | 15.25 | 20.47 |
| Solyc07g066170.2.1 | Tomato | nucleus | 17.0 | 20.3 |
| PGSC0003DMT400056956 | Potato | nucleus | 30.0 | 20.07 |
| TraesCS7A01G240200.1 | Wheat | cytosol | 27.25 | 20.04 |
| TraesCS5B01G256500.1 | Wheat | cytosol, golgi, nucleus, plastid | 27.0 | 19.78 |
| TraesCS7B01G135800.1 | Wheat | cytosol, golgi, nucleus | 26.5 | 19.7 |
| TraesCS5A01G257000.1 | Wheat | cytosol, golgi, nucleus, plastid | 26.25 | 19.27 |
| TraesCS7D01G238200.1 | Wheat | cytosol | 25.75 | 19.18 |
| Os08t0497900-01 | Rice | nucleus | 22.0 | 19.05 |
| Zm00001d005997_P002 | Maize | plastid | 25.5 | 18.96 |
| Zm00001d020879_P001 | Maize | cytosol, golgi, nucleus, plastid | 18.75 | 18.7 |
| HORVU5Hr1G071910.1 | Barley | nucleus | 25.5 | 18.61 |
| GSMUA_Achr4P01630_001 | Banana | cytosol, golgi, nucleus | 27.5 | 18.49 |
| TraesCS5D01G265600.1 | Wheat | nucleus | 25.5 | 18.48 |
| GSMUA_Achr10P... | Banana | cytosol | 23.25 | 18.45 |
| HORVU7Hr1G048940.3 | Barley | cytosol | 26.25 | 18.39 |
| EER96942 | Sorghum | cytosol, golgi, nucleus, plastid | 24.5 | 18.08 |
| EES14314 | Sorghum | nucleus | 22.25 | 17.59 |
| Zm00001d003334_P001 | Maize | cytosol, nucleus, plastid | 13.25 | 17.21 |
| GSMUA_Achr3P04120_001 | Banana | nucleus | 25.5 | 17.17 |
| HORVU2Hr1G081800.3 | Barley | cytosol, nucleus | 19.0 | 16.45 |
| OQU81760 | Sorghum | nucleus | 17.5 | 16.43 |
| Os09t0481300-01 | Rice | nucleus | 21.25 | 16.13 |
| TraesCS2A01G331000.1 | Wheat | cytosol | 19.5 | 15.29 |
| TraesCS2D01G332000.1 | Wheat | cytosol | 19.0 | 14.9 |
| Zm00001d025667_P001 | Maize | cytosol | 16.75 | 13.73 |
Protein Annotations
| EnsemblPlants:Bra039387.1 | EnsemblPlants:Bra039387.1-P | EnsemblPlantsGene:Bra039387 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| ncoils:Coil | PANTHER:PTHR34562 | PANTHER:PTHR34562:SF1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000253E940 |
| UniProt:M4FE66 | MapMan:20.4.2.1.2 | : | : | : | : |
Description
AT3G13360 (E=2e-050) WIP3 | WIP3 (WPP-domain Interacting Protein 3)
Coordinates
chrScaffold000164:-:228078..229349
Molecular Weight (calculated)
43608.3 Da
IEP (calculated)
6.164
GRAVY (calculated)
-0.553
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKVSVNGVL VSPDDGIGSP QRSSSVDSLK VESPGGSTRK GFGLKKWRRI KRDTPVKDES AAPVDDGSKL LKRNLTGLVN PPSKHVDLSS VEARQGSEGS
101: VGSVNMMAHH HHHHLPSVVN GFSPGPGLFT VGQGFEKSEE HSGGGKIDSG SQGRDTIKNG SEERIDSDLR SSDFVFSSGA VSAANRIADG QEARELVETY
201: SRSENGGEDE DGVESHKKNN HYQADKDQIA DSIRCLAALQ EALWKEVTSF QELSKESIPP LHSNIDEDNS GSQVLILKQK VKLLQVKLEE ARADLDAKEA
301: RIQELENAKI EAELEGVFQR KMEAEIQHLM LTSSLNSTLL KEHPKKVHSV AEDPEPNRGN MLGKTCKSSF YFLIQLILLV SIVRLLLLQS SPASQLVIPT
101: VGSVNMMAHH HHHHLPSVVN GFSPGPGLFT VGQGFEKSEE HSGGGKIDSG SQGRDTIKNG SEERIDSDLR SSDFVFSSGA VSAANRIADG QEARELVETY
201: SRSENGGEDE DGVESHKKNN HYQADKDQIA DSIRCLAALQ EALWKEVTSF QELSKESIPP LHSNIDEDNS GSQVLILKQK VKLLQVKLEE ARADLDAKEA
301: RIQELENAKI EAELEGVFQR KMEAEIQHLM LTSSLNSTLL KEHPKKVHSV AEDPEPNRGN MLGKTCKSSF YFLIQLILLV SIVRLLLLQS SPASQLVIPT
001: MFFFSCVCRI ISSTLIIFVD TASPGNNVGG FLRRTLNSLG FCFSCSSVTQ ASSRWIVLGM NESVPDSVED NGNSVPANGL LVLPDNDHEE GGVGSPQRSN
101: SVESPGGSVH STRKGFGLKK WRRIKRDGPV RDEAAPVDDG SKLLKRGLAG LVNPPSKHVE FSSVEARQSS EGSVGSVNMV HHPGVANGFS PDIGCMFAVG
201: QAFEKSEEHS GNTIGGKNVV GGKVVSGSQE KLWSDTIKRA SEERGDIEKE KPCSSLDSDL RSSDFVFSTG SVSVGNHGEK DERLTMNYIG GFSNEGQVKE
301: EVQTYSRSEN GNKEDDGESK KNNNHWADKD ALADSIRSFA VLQEVLWKEV QSFQELGKES VLLHSNTDEL SSDQPSHQNC KEDNSTSSGS KALILKEKVK
401: LLEHKLEEAR AALEAKEARI QELENSKIES ELECIFQRKI ETEIEHLMLT RSLSSLQVLQ ETKKLHSLKE DPVSNRGNIL GKTCKLGFYI LTQLILLVSI
501: LRFLVLQFSP ASRLVIPT
101: SVESPGGSVH STRKGFGLKK WRRIKRDGPV RDEAAPVDDG SKLLKRGLAG LVNPPSKHVE FSSVEARQSS EGSVGSVNMV HHPGVANGFS PDIGCMFAVG
201: QAFEKSEEHS GNTIGGKNVV GGKVVSGSQE KLWSDTIKRA SEERGDIEKE KPCSSLDSDL RSSDFVFSTG SVSVGNHGEK DERLTMNYIG GFSNEGQVKE
301: EVQTYSRSEN GNKEDDGESK KNNNHWADKD ALADSIRSFA VLQEVLWKEV QSFQELGKES VLLHSNTDEL SSDQPSHQNC KEDNSTSSGS KALILKEKVK
401: LLEHKLEEAR AALEAKEARI QELENSKIES ELECIFQRKI ETEIEHLMLT RSLSSLQVLQ ETKKLHSLKE DPVSNRGNIL GKTCKLGFYI LTQLILLVSI
501: LRFLVLQFSP ASRLVIPT
Arabidopsis Description
WIP3WPP domain interacting protein 3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSR4]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.