Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 3
- golgi 2
- plasma membrane 3
- endoplasmic reticulum 2
- vacuole 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d002738_P001 | Maize | plasma membrane | 95.97 | 95.97 |
EES12617 | Sorghum | plasma membrane | 95.16 | 94.78 |
TraesCS2D01G411400.1 | Wheat | plasma membrane | 90.32 | 90.32 |
TraesCS2A01G414100.1 | Wheat | plasma membrane | 89.92 | 89.92 |
TraesCS2B01G433200.1 | Wheat | plasma membrane | 89.11 | 89.11 |
Zm00001d051362_P001 | Maize | plasma membrane | 88.31 | 87.95 |
Zm00001d017485_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 86.29 | 85.6 |
GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 83.87 | 83.53 |
Os04t0550900-00 | Rice | endoplasmic reticulum, extracellular, vacuole | 46.77 | 81.69 |
PGSC0003DMT400030994 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 82.26 | 81.6 |
GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane | 81.45 | 81.12 |
Solyc06g060760.2.1 | Tomato | endoplasmic reticulum | 81.45 | 80.8 |
VIT_00s2783g00010.t01 | Wine grape | extracellular | 39.92 | 79.84 |
VIT_00s0229g00130.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 79.44 | 78.8 |
Bra022131.1-P | Field mustard | extracellular | 63.31 | 76.96 |
AT4G17340.1 | Thale cress | golgi, plasma membrane, vacuole | 76.61 | 76.0 |
CDY65121 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 76.61 | 76.0 |
Bra026245.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 76.61 | 76.0 |
CDY64499 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 76.21 | 75.6 |
CDY51678 | Canola | plasma membrane, vacuole | 76.21 | 75.6 |
CDY28932 | Canola | endoplasmic reticulum, extracellular, vacuole | 63.71 | 75.24 |
AT5G47450.1 | Thale cress | golgi, plasma membrane | 75.81 | 75.2 |
KRH77347 | Soybean | mitochondrion | 74.6 | 74.3 |
KRH28112 | Soybean | mitochondrion | 74.19 | 73.9 |
CDX77768 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 74.6 | 73.71 |
CDY59296 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 74.6 | 73.71 |
Bra024943.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 74.19 | 73.31 |
Zm00001d027652_P001 | Maize | plasma membrane | 62.5 | 62.0 |
Zm00001d011778_P001 | Maize | plasma membrane | 58.87 | 57.48 |
AT1G52180.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 27.42 | 54.84 |
Zm00001d037779_P001 | Maize | cytosol, plasma membrane, vacuole | 47.58 | 46.27 |
Zm00001d015518_P001 | Maize | endoplasmic reticulum, extracellular | 19.76 | 46.23 |
Zm00001d020747_P001 | Maize | extracellular | 19.76 | 45.79 |
Zm00001d013956_P003 | Maize | plasma membrane | 47.98 | 45.42 |
Zm00001d019676_P001 | Maize | endoplasmic reticulum, extracellular, plastid | 19.35 | 45.28 |
Zm00001d039713_P001 | Maize | plasma membrane | 45.16 | 44.98 |
Zm00001d032610_P003 | Maize | mitochondrion, plastid | 47.58 | 44.36 |
Zm00001d002952_P001 | Maize | plasma membrane | 45.97 | 43.02 |
Zm00001d039293_P001 | Maize | plastid | 49.6 | 42.86 |
Zm00001d026178_P002 | Maize | plastid | 41.53 | 38.58 |
Zm00001d010410_P001 | Maize | plasma membrane, plastid | 46.37 | 36.98 |
Zm00001d005410_P001 | Maize | plasma membrane | 38.31 | 33.22 |
Zm00001d019565_P001 | Maize | plasma membrane | 38.31 | 32.99 |
Zm00001d019563_P006 | Maize | plasma membrane | 38.31 | 32.76 |
Zm00001d017288_P001 | Maize | plasma membrane | 37.9 | 32.64 |
Zm00001d005421_P001 | Maize | plasma membrane | 38.31 | 32.53 |
Zm00001d051174_P002 | Maize | plasma membrane | 37.9 | 32.53 |
Zm00001d014285_P001 | Maize | plasma membrane | 36.69 | 32.16 |
Zm00001d003006_P001 | Maize | plasma membrane | 36.69 | 31.93 |
Zm00001d022608_P001 | Maize | plasma membrane | 35.08 | 30.21 |
Zm00001d002690_P001 | Maize | plasma membrane | 33.47 | 28.82 |
Zm00001d051872_P001 | Maize | plasma membrane | 33.06 | 28.47 |
Zm00001d051403_P001 | Maize | plasma membrane | 33.47 | 28.42 |
Zm00001d017526_P001 | Maize | plasma membrane | 32.66 | 28.03 |
Zm00001d048520_P014 | Maize | mitochondrion | 29.84 | 27.61 |
Protein Annotations
Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | EntrezGene:541687 | EMBL:AF057183 | EMBL:AF326503 | ProteinID:AQK45780.1 |
EMBL:AY243804 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | EMBL:BT063144 | UniProt:C0P4C5 | GO:GO:0003674 |
GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 |
GO:GO:0032586 | GO:GO:0055085 | InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 |
PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF257 | UniProt:Q84RL6 | SUPFAM:SSF81338 |
TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI00000ACCBF | EnsemblPlantsGene:Zm00001d026177 | EnsemblPlants:Zm00001d026177_P001 | EnsemblPlants:Zm00001d026177_T001 |
SEG:seg | : | : | : | : | : |
Description
tonoplast intrinsic protein5 tonoplast intrinsic protein5
Coordinates
chr10:+:140377176..140378531
Molecular Weight (calculated)
25133.7 Da
IEP (calculated)
6.673
GRAVY (calculated)
0.864
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKLAFGSFR DSLSAASLKA YVAEFIATLL FVFAGVGSAI AYSQLTKGGA LDPAGLVAIA IAHAFALFVG VSMAANISGG HLNPAVTFGL AVGGHITILT
101: GILYWVAQLL GASVACFLLQ YVTHGQAIPT HGVSGISEIE GVVMEIVITF ALVYTVYATA ADPKKGSLGT IAPMAIGFIV GANILAAGPF SGGSMNPARS
201: FGPAVAAGNF AGNWVYWVGP LVGGGLAGLV YGDVFIASYQ PVGQQEYP
101: GILYWVAQLL GASVACFLLQ YVTHGQAIPT HGVSGISEIE GVVMEIVITF ALVYTVYATA ADPKKGSLGT IAPMAIGFIV GANILAAGPF SGGSMNPARS
201: FGPAVAAGNF AGNWVYWVGP LVGGGLAGLV YGDVFIASYQ PVGQQEYP
001: MVKIEVGSVG DSFSVSSLKA YLSEFIATLL FVFAGVGSAV AFAKLTSDGA LDPAGLVAIA IAHAFALFVG VSIAANISGG HLNPAVTLGL AIGGNITLIT
101: GFFYWIAQCL GSIVACLLLV FVTNGKSVPT HGVSAGLGAV EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSY EAVETREIRV
101: GFFYWIAQCL GSIVACLLLV FVTNGKSVPT HGVSAGLGAV EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSY EAVETREIRV
Arabidopsis Description
TIP2-3Aquaporin TIP2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGL2]
SUBAcon: [golgi,plasma membrane]
SUBAcon: [golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.