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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • mitochondrion 2
  • extracellular 3
  • golgi 2
  • plasma membrane 3
  • endoplasmic reticulum 2
  • vacuole 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, secretory
iPSORT:mitochondrion
MultiLoc:extracellular
Predotar:mitochondrion
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
extracellular: 20408568
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d002738_P001 Maize plasma membrane 95.97 95.97
EES12617 Sorghum plasma membrane 95.16 94.78
TraesCS2D01G411400.1 Wheat plasma membrane 90.32 90.32
TraesCS2A01G414100.1 Wheat plasma membrane 89.92 89.92
TraesCS2B01G433200.1 Wheat plasma membrane 89.11 89.11
Zm00001d051362_P001 Maize plasma membrane 88.31 87.95
Zm00001d017485_P002 Maize endoplasmic reticulum, extracellular, plasma membrane 86.29 85.6
GSMUA_Achr11P... Banana extracellular, plasma membrane 83.87 83.53
Os04t0550900-00 Rice endoplasmic reticulum, extracellular, vacuole 46.77 81.69
PGSC0003DMT400030994 Potato endoplasmic reticulum, plasma membrane, vacuole 82.26 81.6
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane 81.45 81.12
Solyc06g060760.2.1 Tomato endoplasmic reticulum 81.45 80.8
VIT_00s2783g00010.t01 Wine grape extracellular 39.92 79.84
VIT_00s0229g00130.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 79.44 78.8
Bra022131.1-P Field mustard extracellular 63.31 76.96
AT4G17340.1 Thale cress golgi, plasma membrane, vacuole 76.61 76.0
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 76.61 76.0
Bra026245.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 76.61 76.0
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 76.21 75.6
CDY51678 Canola plasma membrane, vacuole 76.21 75.6
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 63.71 75.24
AT5G47450.1 Thale cress golgi, plasma membrane 75.81 75.2
KRH77347 Soybean mitochondrion 74.6 74.3
KRH28112 Soybean mitochondrion 74.19 73.9
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 74.6 73.71
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 74.6 73.71
Bra024943.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 74.19 73.31
Zm00001d027652_P001 Maize plasma membrane 62.5 62.0
Zm00001d011778_P001 Maize plasma membrane 58.87 57.48
AT1G52180.1 Thale cress endoplasmic reticulum, extracellular, vacuole 27.42 54.84
Zm00001d037779_P001 Maize cytosol, plasma membrane, vacuole 47.58 46.27
Zm00001d015518_P001 Maize endoplasmic reticulum, extracellular 19.76 46.23
Zm00001d020747_P001 Maize extracellular 19.76 45.79
Zm00001d013956_P003 Maize plasma membrane 47.98 45.42
Zm00001d019676_P001 Maize endoplasmic reticulum, extracellular, plastid 19.35 45.28
Zm00001d039713_P001 Maize plasma membrane 45.16 44.98
Zm00001d032610_P003 Maize mitochondrion, plastid 47.58 44.36
Zm00001d002952_P001 Maize plasma membrane 45.97 43.02
Zm00001d039293_P001 Maize plastid 49.6 42.86
Zm00001d026178_P002 Maize plastid 41.53 38.58
Zm00001d010410_P001 Maize plasma membrane, plastid 46.37 36.98
Zm00001d005410_P001 Maize plasma membrane 38.31 33.22
Zm00001d019565_P001 Maize plasma membrane 38.31 32.99
Zm00001d019563_P006 Maize plasma membrane 38.31 32.76
Zm00001d017288_P001 Maize plasma membrane 37.9 32.64
Zm00001d005421_P001 Maize plasma membrane 38.31 32.53
Zm00001d051174_P002 Maize plasma membrane 37.9 32.53
Zm00001d014285_P001 Maize plasma membrane 36.69 32.16
Zm00001d003006_P001 Maize plasma membrane 36.69 31.93
Zm00001d022608_P001 Maize plasma membrane 35.08 30.21
Zm00001d002690_P001 Maize plasma membrane 33.47 28.82
Zm00001d051872_P001 Maize plasma membrane 33.06 28.47
Zm00001d051403_P001 Maize plasma membrane 33.47 28.42
Zm00001d017526_P001 Maize plasma membrane 32.66 28.03
Zm00001d048520_P014 Maize mitochondrion 29.84 27.61
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3EntrezGene:541687EMBL:AF057183EMBL:AF326503ProteinID:AQK45780.1
EMBL:AY243804InterPro:Aquaporin-likeInterPro:Aquaporin_transptrEMBL:BT063144UniProt:C0P4C5GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021
GO:GO:0032586GO:GO:0055085InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230
PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF257UniProt:Q84RL6SUPFAM:SSF81338
TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI00000ACCBFEnsemblPlantsGene:Zm00001d026177EnsemblPlants:Zm00001d026177_P001EnsemblPlants:Zm00001d026177_T001
SEG:seg:::::
Description
tonoplast intrinsic protein5 tonoplast intrinsic protein5
Coordinates
chr10:+:140377176..140378531
Molecular Weight (calculated)
25133.7 Da
IEP (calculated)
6.673
GRAVY (calculated)
0.864
Length
248 amino acids
Sequence
(BLAST)
001: MVKLAFGSFR DSLSAASLKA YVAEFIATLL FVFAGVGSAI AYSQLTKGGA LDPAGLVAIA IAHAFALFVG VSMAANISGG HLNPAVTFGL AVGGHITILT
101: GILYWVAQLL GASVACFLLQ YVTHGQAIPT HGVSGISEIE GVVMEIVITF ALVYTVYATA ADPKKGSLGT IAPMAIGFIV GANILAAGPF SGGSMNPARS
201: FGPAVAAGNF AGNWVYWVGP LVGGGLAGLV YGDVFIASYQ PVGQQEYP
Best Arabidopsis Sequence Match ( AT5G47450.1 )
(BLAST)
001: MVKIEVGSVG DSFSVSSLKA YLSEFIATLL FVFAGVGSAV AFAKLTSDGA LDPAGLVAIA IAHAFALFVG VSIAANISGG HLNPAVTLGL AIGGNITLIT
101: GFFYWIAQCL GSIVACLLLV FVTNGKSVPT HGVSAGLGAV EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSY EAVETREIRV
Arabidopsis Description
TIP2-3Aquaporin TIP2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGL2]
SUBAcon: [golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.