Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • mitochondrion 1
  • golgi 2
  • extracellular 1
  • plasma membrane 3
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G340600.1
TraesCS1D01G342600.1
TraesCS2A01G368500.1
TraesCS2B01G385700.2
TraesCS2D01G365300.2
TraesCS3A01G274800.1
TraesCS3A01G313000.1
TraesCS3B01G158900.1
TraesCS3B01G308400.1
TraesCS3D01G141300.1
TraesCS3D01G274500.1
TraesCS6A01G237600.1
TraesCS6B01G266100.1
TraesCS6D01G220300.1
TraesCS7A01G300700.1
TraesCS7D01G296400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G17340.1 TraesCS1A01G340600.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS1D01G342600.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3A01G274800.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3A01G313000.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3B01G158900.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3B01G308400.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3D01G141300.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3D01G274500.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS2A01G368500.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS2B01G385700.2 AT3G60600.1 21798944
AT4G17340.1 TraesCS2D01G365300.2 AT3G60600.1 21798944
AT4G17340.1 TraesCS6A01G237600.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS6B01G266100.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS6D01G220300.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS7A01G300700.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS7D01G296400.1 AT3G60600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G411400.1 Wheat plasma membrane 98.79 98.79
TraesCS2A01G414100.1 Wheat plasma membrane 98.39 98.39
Zm00001d002738_P001 Maize plasma membrane 90.32 90.32
EES12617 Sorghum plasma membrane 89.52 89.16
Zm00001d026177_P001 Maize extracellular 89.11 89.11
TraesCS6B01G275100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 86.69 86.35
GSMUA_Achr11P... Banana extracellular, plasma membrane 83.87 83.53
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane 81.45 81.12
PGSC0003DMT400030994 Potato endoplasmic reticulum, plasma membrane, vacuole 81.45 80.8
Solyc06g060760.2.1 Tomato endoplasmic reticulum 80.65 80.0
Os04t0550900-00 Rice endoplasmic reticulum, extracellular, vacuole 45.56 79.58
VIT_00s0229g00130.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 77.42 76.8
Bra026245.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 76.61 76.0
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 76.61 76.0
VIT_00s2783g00010.t01 Wine grape extracellular 37.9 75.81
Bra022131.1-P Field mustard extracellular 62.1 75.49
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 75.81 75.2
AT5G47450.1 Thale cress golgi, plasma membrane 75.81 75.2
AT4G17340.1 Thale cress golgi, plasma membrane, vacuole 75.4 74.8
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 62.9 74.29
CDY51678 Canola plasma membrane, vacuole 74.19 73.6
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 74.19 73.31
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 74.19 73.31
Bra024943.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 73.79 72.91
KRH28112 Soybean mitochondrion 71.37 71.08
KRH77347 Soybean mitochondrion 70.56 70.28
TraesCS7B01G243000.1 Wheat plasma membrane 68.15 68.15
TraesCS4B01G310900.1 Wheat unclear 59.68 59.2
TraesCS3B01G608500.1 Wheat plasma membrane 57.66 56.75
AT1G52180.1 Thale cress endoplasmic reticulum, extracellular, vacuole 27.82 55.65
TraesCS3B01G182200.1 Wheat endoplasmic reticulum, extracellular, vacuole 50.0 49.4
TraesCS1B01G182200.1 Wheat golgi 48.79 46.01
TraesCS3B01G182400.1 Wheat plasma membrane 45.16 45.16
TraesCS4B01G349500.1 Wheat plasma membrane 45.56 44.31
TraesCS2B01G433300.1 Wheat endoplasmic reticulum 42.34 42.34
TraesCS2B01G391400.1 Wheat extracellular, plasma membrane, vacuole 45.16 42.26
TraesCS6B01G398000.1 Wheat extracellular 17.74 34.38
TraesCS5B01G570800.1 Wheat golgi, peroxisome, plasma membrane 37.9 33.33
TraesCS2B01G225900.1 Wheat golgi 38.31 32.76
TraesCS2B01G077700.1 Wheat plasma membrane 37.5 32.75
TraesCS7B01G002000.1 Wheat golgi, peroxisome, plasma membrane 37.5 32.75
TraesCS2B01G396800.1 Wheat golgi 37.5 32.07
TraesCS6B01G259000.1 Wheat golgi, peroxisome, plasma membrane 36.69 31.82
TraesCS2B01G396700.2 Wheat plasma membrane 37.5 31.53
TraesCS5B01G567600.1 Wheat golgi, peroxisome, plasma membrane 35.89 30.58
TraesCS7B01G003900.1 Wheat golgi, peroxisome, plasma membrane 35.89 30.58
TraesCS7B01G003800.1 Wheat golgi, peroxisome, plasma membrane 35.48 30.45
TraesCS4B01G362300.1 Wheat golgi, peroxisome, plasma membrane 35.48 30.14
TraesCS5B01G567500.1 Wheat golgi, peroxisome, plasma membrane 35.08 30.1
TraesCS5B01G332500.1 Wheat plasma membrane 35.08 29.9
TraesCS6B01G450000.1 Wheat unclear 34.27 29.11
TraesCS5B01G178700.1 Wheat plasma membrane 33.87 28.77
TraesCS6B01G450200.1 Wheat plastid 33.87 28.77
TraesCS6B01G114400.1 Wheat golgi, peroxisome, plasma membrane 33.87 28.47
TraesCS2B01G425600.1 Wheat golgi, plasma membrane 33.06 28.47
TraesCS2B01G605900.1 Wheat golgi, peroxisome, plasma membrane 33.06 28.37
TraesCS6B01G279200.1 Wheat plastid 33.06 28.28
TraesCS7B01G096000.1 Wheat golgi, peroxisome, plasma membrane 30.65 25.0
TraesCS4B01G027600.1 Wheat plasma membrane 27.82 23.71
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085
InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221
PANTHER:PTHR19139PANTHER:PTHR19139:SF257SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixEnsemblPlantsGene:TraesCS2B01G433200
EnsemblPlants:TraesCS2B01G433200.1TIGR:cd00333SEG:seg:::
Description
No Description!
Coordinates
chr2B:+:622656952..622658157
Molecular Weight (calculated)
25137.6 Da
IEP (calculated)
6.214
GRAVY (calculated)
0.838
Length
248 amino acids
Sequence
(BLAST)
001: MVKLAFGSFG DSFSGTSVRS YVAEFIATLL FVFAGVGSAI SYGQLTQGGA LDPAGLVAIA IAHAFALFVG VAMAANISGG HLNPAVTFGL AVGGHVTILT
101: GLFYWVAQLL GATVACLLLQ FVTNGQPMPT HAVSGISEVE GVVMEIVITF ALVYTVYATA ADPKKGSLGT IAPMAIGFIV GANILAAGPF SGGSMNPARS
201: FGPAVAAGNF SGHWVYWVGP LIGGGLAGLV YGDVFIASYQ PVGHQDYP
Best Arabidopsis Sequence Match ( AT5G47450.1 )
(BLAST)
001: MVKIEVGSVG DSFSVSSLKA YLSEFIATLL FVFAGVGSAV AFAKLTSDGA LDPAGLVAIA IAHAFALFVG VSIAANISGG HLNPAVTLGL AIGGNITLIT
101: GFFYWIAQCL GSIVACLLLV FVTNGKSVPT HGVSAGLGAV EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSY EAVETREIRV
Arabidopsis Description
TIP2-3Aquaporin TIP2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGL2]
SUBAcon: [golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.