Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G567500.1 | Wheat | golgi, peroxisome, plasma membrane | 96.56 | 97.23 |
| TraesCS5B01G567600.1 | Wheat | golgi, peroxisome, plasma membrane | 96.22 | 96.22 |
| TraesCS7B01G003800.1 | Wheat | golgi, peroxisome, plasma membrane | 94.85 | 95.5 |
| HORVU5Hr1G125600.1 | Barley | golgi, peroxisome, plasma membrane | 94.85 | 94.85 |
| TraesCS4B01G362300.1 | Wheat | golgi, peroxisome, plasma membrane | 82.13 | 81.85 |
| TraesCS5B01G570800.1 | Wheat | golgi, peroxisome, plasma membrane | 74.23 | 76.6 |
| TraesCS6B01G114400.1 | Wheat | golgi, peroxisome, plasma membrane | 77.32 | 76.27 |
| TraesCS7B01G002000.1 | Wheat | golgi, peroxisome, plasma membrane | 73.88 | 75.7 |
| OQU91911 | Sorghum | plasma membrane | 70.79 | 73.05 |
| TraesCS2B01G225900.1 | Wheat | golgi | 71.82 | 72.07 |
| Zm00001d014285_P001 | Maize | plasma membrane | 69.42 | 71.38 |
| TraesCS2B01G396800.1 | Wheat | golgi | 70.45 | 70.69 |
| TraesCS6B01G259000.1 | Wheat | golgi, peroxisome, plasma membrane | 69.42 | 70.63 |
| Os03t0861300-01 | Rice | cytosol, peroxisome, plasma membrane | 67.7 | 70.36 |
| TraesCS2B01G396700.2 | Wheat | plasma membrane | 70.1 | 69.15 |
| TraesCS6B01G398000.1 | Wheat | extracellular | 29.9 | 67.97 |
| TraesCS2B01G077700.1 | Wheat | plasma membrane | 65.98 | 67.61 |
| TraesCS5B01G332500.1 | Wheat | plasma membrane | 61.17 | 61.17 |
| TraesCS2B01G425600.1 | Wheat | golgi, plasma membrane | 59.11 | 59.72 |
| TraesCS6B01G279200.1 | Wheat | plastid | 59.45 | 59.66 |
| TraesCS6B01G450200.1 | Wheat | plastid | 59.45 | 59.25 |
| TraesCS6B01G450000.1 | Wheat | unclear | 59.45 | 59.25 |
| TraesCS5B01G178700.1 | Wheat | plasma membrane | 59.11 | 58.9 |
| TraesCS2B01G605900.1 | Wheat | golgi, peroxisome, plasma membrane | 58.42 | 58.82 |
| TraesCS7B01G096000.1 | Wheat | golgi, peroxisome, plasma membrane | 52.92 | 50.66 |
| TraesCS4B01G027600.1 | Wheat | plasma membrane | 48.11 | 48.11 |
| TraesCS7B01G243000.1 | Wheat | plasma membrane | 31.27 | 36.69 |
| TraesCS2B01G433200.1 | Wheat | plasma membrane | 30.58 | 35.89 |
| TraesCS6B01G275100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 30.24 | 35.34 |
| TraesCS3B01G608500.1 | Wheat | plasma membrane | 30.58 | 35.32 |
| TraesCS4B01G310900.1 | Wheat | unclear | 29.9 | 34.8 |
| TraesCS2B01G391400.1 | Wheat | extracellular, plasma membrane, vacuole | 30.58 | 33.58 |
| TraesCS3B01G182200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 28.87 | 33.47 |
| TraesCS1B01G182200.1 | Wheat | golgi | 28.87 | 31.94 |
| TraesCS2B01G433300.1 | Wheat | endoplasmic reticulum | 25.43 | 29.84 |
| TraesCS3B01G182400.1 | Wheat | plasma membrane | 25.43 | 29.84 |
| TraesCS4B01G349500.1 | Wheat | plasma membrane | 25.77 | 29.41 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF163 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7B01G003900 |
| EnsemblPlants:TraesCS7B01G003900.1 | TIGR:cd00333 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7B:+:1482282..1483157
Molecular Weight (calculated)
30451.0 Da
IEP (calculated)
8.305
GRAVY (calculated)
0.529
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MPMAAAQGKL SPEAMDNEVI SNGSAKDYLD PPPAPLVDAG ELGKWSLYRA VIAEFTATLL FVYVAVATVV GHKRQTDAQA CSGAGVLGIA WAFGGMIAVL
101: VYCTAGISGG HINPAVTFGL LLARKVSLPR AFLYMVAQCV GAICGAALVR AVHGGHHYVL YGGGANELAP GYSRTAGLIA EIAGTFVLVY TVFSATDPKR
201: IARDPHVPVL APLLIGFAVL MAHLATIPVT GTGINPARSF GAAVVYNGGK AWDDQWIFWV GPFIGAAVAT VYHQYILRNS AIFRSNYDAS V
101: VYCTAGISGG HINPAVTFGL LLARKVSLPR AFLYMVAQCV GAICGAALVR AVHGGHHYVL YGGGANELAP GYSRTAGLIA EIAGTFVLVY TVFSATDPKR
201: IARDPHVPVL APLLIGFAVL MAHLATIPVT GTGINPARSF GAAVVYNGGK AWDDQWIFWV GPFIGAAVAT VYHQYILRNS AIFRSNYDAS V
001: MRALTIAIVS LYKQLSFVSS VFTNTTYPQY KTQLSYITKK VIEMAKDVEG PEGFQTRDYE DPPPTPFFDA DELTKWSLYR AVIAEFVATL LFLYITVLTV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV
Arabidopsis Description
PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.