Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G560400.1 | Wheat | golgi, peroxisome, plasma membrane | 96.19 | 95.53 |
| TraesCS4A01G312700.1 | Wheat | plasma membrane | 95.85 | 95.19 |
| TraesCS5B01G567500.1 | Wheat | golgi, peroxisome, plasma membrane | 95.16 | 95.16 |
| HORVU5Hr1G125600.1 | Barley | golgi, peroxisome, plasma membrane | 95.5 | 94.85 |
| TraesCS7B01G003900.1 | Wheat | golgi, peroxisome, plasma membrane | 95.5 | 94.85 |
| TraesCS5B01G567600.1 | Wheat | golgi, peroxisome, plasma membrane | 95.5 | 94.85 |
| TraesCS5D01G548900.1 | Wheat | golgi, peroxisome, plasma membrane | 91.35 | 91.35 |
| TraesCS4B01G362300.1 | Wheat | golgi, peroxisome, plasma membrane | 82.7 | 81.85 |
| TraesCS5B01G570800.1 | Wheat | golgi, peroxisome, plasma membrane | 74.74 | 76.6 |
| TraesCS6B01G114400.1 | Wheat | golgi, peroxisome, plasma membrane | 77.85 | 76.27 |
| TraesCS7B01G002000.1 | Wheat | golgi, peroxisome, plasma membrane | 74.05 | 75.35 |
| OQU91911 | Sorghum | plasma membrane | 70.93 | 72.69 |
| Zm00001d014285_P001 | Maize | plasma membrane | 69.2 | 70.67 |
| Os03t0861300-01 | Rice | cytosol, peroxisome, plasma membrane | 68.17 | 70.36 |
| TraesCS2B01G225900.1 | Wheat | golgi | 70.59 | 70.34 |
| TraesCS2B01G396800.1 | Wheat | golgi | 69.55 | 69.31 |
| TraesCS6B01G259000.1 | Wheat | golgi, peroxisome, plasma membrane | 68.17 | 68.88 |
| TraesCS2B01G396700.2 | Wheat | plasma membrane | 69.2 | 67.8 |
| TraesCS2B01G077700.1 | Wheat | plasma membrane | 66.44 | 67.61 |
| TraesCS6B01G398000.1 | Wheat | extracellular | 29.76 | 67.19 |
| TraesCS5B01G332500.1 | Wheat | plasma membrane | 61.94 | 61.51 |
| TraesCS6B01G279200.1 | Wheat | plastid | 59.52 | 59.31 |
| TraesCS2B01G425600.1 | Wheat | golgi, plasma membrane | 58.82 | 59.03 |
| TraesCS6B01G450000.1 | Wheat | unclear | 59.52 | 58.9 |
| TraesCS6B01G450200.1 | Wheat | plastid | 58.82 | 58.22 |
| TraesCS5B01G178700.1 | Wheat | plasma membrane | 58.82 | 58.22 |
| TraesCS2B01G605900.1 | Wheat | golgi, peroxisome, plasma membrane | 58.13 | 58.13 |
| TraesCS7B01G096000.1 | Wheat | golgi, peroxisome, plasma membrane | 53.98 | 51.32 |
| TraesCS4B01G027600.1 | Wheat | plasma membrane | 48.44 | 48.11 |
| TraesCS7B01G243000.1 | Wheat | plasma membrane | 31.49 | 36.69 |
| TraesCS2B01G433200.1 | Wheat | plasma membrane | 30.45 | 35.48 |
| TraesCS6B01G275100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 30.45 | 35.34 |
| TraesCS3B01G608500.1 | Wheat | plasma membrane | 30.1 | 34.52 |
| TraesCS4B01G310900.1 | Wheat | unclear | 29.76 | 34.4 |
| TraesCS3B01G182200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 29.07 | 33.47 |
| TraesCS1B01G182200.1 | Wheat | golgi | 29.76 | 32.7 |
| TraesCS2B01G391400.1 | Wheat | extracellular, plasma membrane, vacuole | 29.76 | 32.45 |
| TraesCS2B01G433300.1 | Wheat | endoplasmic reticulum | 25.26 | 29.44 |
| TraesCS3B01G182400.1 | Wheat | plasma membrane | 25.26 | 29.44 |
| TraesCS4B01G349500.1 | Wheat | plasma membrane | 25.61 | 29.02 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF163 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7B01G003800 |
| EnsemblPlants:TraesCS7B01G003800.1 | TIGR:cd00333 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7B:+:1436946..1437990
Molecular Weight (calculated)
30298.8 Da
IEP (calculated)
8.571
GRAVY (calculated)
0.519
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAQGKLSP EAIDNEVISN GSAKDYLDPP PAPLVDAGEL GKWSLYRAII AEFTATLLFV YVAVATVVGH KRQTDAQACS GTGVLGIAWA FGGTIAVLVY
101: CTAGISGGHI NPAVTFGLLL ARKVTLPRAF LYIVAQCVGA ICGAALVRAV HGGHHYALYG GGANELAPGY SRTAGLIAEI AGTFVLVYTV FSATDPKRIA
201: RDPHVPVLAP LLIGFAVLMA HLATIPVTGT GINPARSFGA AVVYNNKKAW DDQWIFWVGP FLGAAVAMVY HQYILRNGAI FRSNYDAAV
101: CTAGISGGHI NPAVTFGLLL ARKVTLPRAF LYIVAQCVGA ICGAALVRAV HGGHHYALYG GGANELAPGY SRTAGLIAEI AGTFVLVYTV FSATDPKRIA
201: RDPHVPVLAP LLIGFAVLMA HLATIPVTGT GINPARSFGA AVVYNNKKAW DDQWIFWVGP FLGAAVAMVY HQYILRNGAI FRSNYDAAV
001: MAKDVEAVPG EGFQTRDYQD PPPAPFIDGA ELKKWSFYRA VIAEFVATLL FLYITVLTVI GYKIQSDTDA GGVDCGGVGI LGIAWAFGGM IFILVYCTAG
101: ISGGHINPAV TFGLFLARKV SLPRALLYII AQCLGAICGV GFVKAFQSSY YTRYGGGANS LADGYSTGTG LAAEIIGTFV LVYTVFSATD PKRSARDSHV
201: PVLAPLPIGF AVFMVHLATI PITGTGINPA RSFGAAVIYN KSKPWDDHWI FWVGPFIGAA IAAFYHQFVL RASGSKSLGS FRSAANV
101: ISGGHINPAV TFGLFLARKV SLPRALLYII AQCLGAICGV GFVKAFQSSY YTRYGGGANS LADGYSTGTG LAAEIIGTFV LVYTVFSATD PKRSARDSHV
201: PVLAPLPIGF AVFMVHLATI PITGTGINPA RSFGAAVIYN KSKPWDDHWI FWVGPFIGAA IAAFYHQFVL RASGSKSLGS FRSAANV
Arabidopsis Description
PIP2-1PIP2A [Source:UniProtKB/TrEMBL;Acc:A0A178V8P4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.