Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G560400.1 | Wheat | golgi, peroxisome, plasma membrane | 95.53 | 95.53 |
| TraesCS4A01G312700.1 | Wheat | plasma membrane | 95.53 | 95.53 |
| TraesCS7B01G003800.1 | Wheat | golgi, peroxisome, plasma membrane | 94.85 | 95.5 |
| TraesCS7B01G003900.1 | Wheat | golgi, peroxisome, plasma membrane | 94.85 | 94.85 |
| TraesCS5B01G567600.1 | Wheat | golgi, peroxisome, plasma membrane | 94.5 | 94.5 |
| TraesCS5B01G567500.1 | Wheat | golgi, peroxisome, plasma membrane | 93.81 | 94.46 |
| TraesCS5D01G548900.1 | Wheat | golgi, peroxisome, plasma membrane | 91.07 | 91.7 |
| HORVU6Hr1G014300.1 | Barley | cytosol, golgi, peroxisome | 76.63 | 76.37 |
| OQU91911 | Sorghum | plasma membrane | 70.1 | 72.34 |
| HORVU0Hr1G014490.7 | Barley | plastid | 72.51 | 71.04 |
| Zm00001d014285_P001 | Maize | plasma membrane | 68.73 | 70.67 |
| Os03t0861300-01 | Rice | cytosol, peroxisome, plasma membrane | 67.35 | 70.0 |
| HORVU2Hr1G089970.3 | Barley | endoplasmic reticulum, extracellular | 20.27 | 69.41 |
| HORVU2Hr1G089940.3 | Barley | plasma membrane | 68.73 | 68.97 |
| HORVU6Hr1G058930.20 | Barley | golgi, plasma membrane | 60.82 | 61.25 |
| HORVU2Hr1G038740.1 | Barley | golgi, mitochondrion, plasma membrane | 69.76 | 59.53 |
| HORVU0Hr1G011280.5 | Barley | cytosol | 53.26 | 59.16 |
| HORVU6Hr1G064140.1 | Barley | golgi, peroxisome, plasma membrane | 57.73 | 57.93 |
| HORVU5Hr1G084230.1 | Barley | extracellular, golgi, mitochondrion | 61.86 | 57.88 |
| HORVU5Hr1G027240.4 | Barley | plasma membrane | 62.2 | 56.92 |
| HORVU5Hr1G029550.2 | Barley | plasma membrane | 61.86 | 56.6 |
| HORVU2Hr1G010990.2 | Barley | plasma membrane | 59.45 | 54.4 |
| HORVU5Hr1G055200.4 | Barley | golgi, plastid | 57.73 | 54.02 |
| HORVU2Hr1G089820.6 | Barley | golgi | 44.33 | 45.1 |
| HORVU7Hr1G038940.1 | Barley | golgi | 29.55 | 42.16 |
| HORVU7Hr1G081770.8 | Barley | plasma membrane | 30.93 | 36.14 |
| HORVU6Hr1G062980.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 30.58 | 35.74 |
| HORVU0Hr1G032130.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 30.58 | 35.74 |
| HORVU4Hr1G079230.1 | Barley | vacuole | 29.9 | 34.8 |
| HORVU3Hr1G116790.2 | Barley | vacuole | 29.9 | 34.52 |
| HORVU1Hr1G043890.2 | Barley | mitochondrion | 29.21 | 32.32 |
| HORVU4Hr1G085250.2 | Barley | plastid | 26.46 | 25.58 |
| HORVU3Hr1G031620.5 | Barley | nucleus, peroxisome, plastid | 27.15 | 24.84 |
| HORVU2Hr1G097780.15 | Barley | golgi, mitochondrion, plastid | 18.56 | 20.07 |
| HORVU3Hr1G031680.1 | Barley | vacuole | 16.84 | 18.28 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | EnsemblPlantsGene:HORVU5Hr1G125600 | EnsemblPlants:HORVU5Hr1G125600.1 | InterPro:IPR023271 | UniProt:M0W8N5 | InterPro:MIP |
| InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF163 |
| SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI0002959D73 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr5H:+:669246247..669247690
Molecular Weight (calculated)
30511.1 Da
IEP (calculated)
8.814
GRAVY (calculated)
0.520
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMAAAQGKL SPDAIDNEVI SNGSAKDYLD PPPAPLVDAG ELGKWSLYRA VIAEFTATLL FVYVAVATVV GHKRQTDAQA CSGAGVLGIA WAFGGTIAVL
101: VYCTAGISGG HINPAVTFGL LLARKVSLPR AFLYMVAQCV GAICGAALVR AVHGGHHYAL YGGGANELAP GYSRMAGLIA EIAGTFVLVY TVFSATDPKR
201: IARDPHVPVL APLLIGFSVL MAHLATIPVT GTGINPARSF GAAVVYNNKK AWGEQWIFWV GPFIGSAVAM VYHQYVLRNS AIFRSNYDAA V
101: VYCTAGISGG HINPAVTFGL LLARKVSLPR AFLYMVAQCV GAICGAALVR AVHGGHHYAL YGGGANELAP GYSRMAGLIA EIAGTFVLVY TVFSATDPKR
201: IARDPHVPVL APLLIGFSVL MAHLATIPVT GTGINPARSF GAAVVYNNKK AWGEQWIFWV GPFIGSAVAM VYHQYVLRNS AIFRSNYDAA V
001: MAKDVEAVPG EGFQTRDYQD PPPAPFIDGA ELKKWSFYRA VIAEFVATLL FLYITVLTVI GYKIQSDTDA GGVDCGGVGI LGIAWAFGGM IFILVYCTAG
101: ISGGHINPAV TFGLFLARKV SLPRALLYII AQCLGAICGV GFVKAFQSSY YTRYGGGANS LADGYSTGTG LAAEIIGTFV LVYTVFSATD PKRSARDSHV
201: PVLAPLPIGF AVFMVHLATI PITGTGINPA RSFGAAVIYN KSKPWDDHWI FWVGPFIGAA IAAFYHQFVL RASGSKSLGS FRSAANV
101: ISGGHINPAV TFGLFLARKV SLPRALLYII AQCLGAICGV GFVKAFQSSY YTRYGGGANS LADGYSTGTG LAAEIIGTFV LVYTVFSATD PKRSARDSHV
201: PVLAPLPIGF AVFMVHLATI PITGTGINPA RSFGAAVIYN KSKPWDDHWI FWVGPFIGAA IAAFYHQFVL RASGSKSLGS FRSAANV
Arabidopsis Description
PIP2-1PIP2A [Source:UniProtKB/TrEMBL;Acc:A0A178V8P4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.