Subcellular Localization
min:
: max
Winner_takes_all: golgi, plastid
Predictor Summary:
Predictor Summary:
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G010990.2 | |
| HORVU2Hr1G038740.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G178700.1 | Wheat | plasma membrane | 93.57 | 99.66 |
| TraesCS5D01G185400.1 | Wheat | plasma membrane | 93.57 | 99.66 |
| TraesCS5A01G181000.1 | Wheat | plastid | 92.6 | 99.31 |
| GSMUA_Achr8P11540_001 | Banana | extracellular | 53.7 | 87.89 |
| HORVU6Hr1G064140.1 | Barley | golgi, peroxisome, plasma membrane | 81.67 | 87.59 |
| GSMUA_AchrUn_... | Banana | extracellular | 53.38 | 87.37 |
| CDX89115 | Canola | plasma membrane | 63.02 | 87.11 |
| CDY66912 | Canola | extracellular | 57.23 | 86.41 |
| AT4G00430.1 | Thale cress | golgi, peroxisome, plasma membrane | 79.1 | 85.71 |
| Solyc03g096290.2.1 | Tomato | nucleus | 78.78 | 85.66 |
| CDY51161 | Canola | cytosol, peroxisome, plasma membrane | 78.78 | 85.66 |
| CDY38017 | Canola | plasma membrane | 78.78 | 85.66 |
| AT1G01620.1 | Thale cress | golgi, peroxisome, plasma membrane | 78.46 | 85.31 |
| CDY07221 | Canola | cytosol, peroxisome, plasma membrane | 78.46 | 85.31 |
| CDX83385 | Canola | cytosol, peroxisome, plasma membrane | 78.46 | 85.31 |
| Solyc01g094690.2.1 | Tomato | nucleus | 78.14 | 85.26 |
| CDX74334 | Canola | cytosol, peroxisome, plasma membrane | 78.78 | 85.07 |
| AT4G23400.1 | Thale cress | plasma membrane | 78.46 | 85.02 |
| CDX71738 | Canola | plasma membrane | 78.14 | 84.97 |
| CDX74777 | Canola | cytosol, peroxisome, plasma membrane | 78.14 | 84.97 |
| CDY48920 | Canola | plasma membrane | 78.14 | 84.97 |
| CDX90046 | Canola | cytosol, peroxisome, plasma membrane | 78.14 | 84.97 |
| AT3G61430.1 | Thale cress | plasma membrane | 78.14 | 84.97 |
| CDX95670 | Canola | cytosol, peroxisome, plasma membrane | 78.14 | 84.97 |
| CDX91911 | Canola | cytosol, peroxisome, plasma membrane | 78.46 | 84.72 |
| CDY10936 | Canola | plasma membrane | 78.14 | 84.67 |
| CDY37078 | Canola | cytosol, peroxisome, plasma membrane | 77.81 | 84.62 |
| CDY27346 | Canola | cytosol, peroxisome, plasma membrane | 77.81 | 84.62 |
| CDY18886 | Canola | cytosol, peroxisome, plasma membrane | 77.81 | 84.62 |
| CDX94185 | Canola | plasma membrane | 76.85 | 83.28 |
| Solyc12g056220.1.1 | Tomato | plastid | 76.53 | 82.64 |
| Solyc08g008050.2.1 | Tomato | peroxisome | 76.21 | 82.58 |
| Solyc08g081190.2.1 | Tomato | plastid | 75.24 | 81.82 |
| EER89434 | Sorghum | peroxisome | 74.92 | 78.72 |
| CDY15165 | Canola | plastid | 79.74 | 76.54 |
| CDY66913 | Canola | cytosol, mitochondrion, nucleus | 11.25 | 76.09 |
| AT2G45960.3 | Thale cress | golgi, peroxisome, plasma membrane | 71.06 | 73.42 |
| HORVU2Hr1G089940.3 | Barley | plasma membrane | 62.06 | 66.55 |
| HORVU2Hr1G089970.3 | Barley | endoplasmic reticulum, extracellular | 18.01 | 65.88 |
| HORVU6Hr1G058930.20 | Barley | golgi, plasma membrane | 56.27 | 60.55 |
| HORVU0Hr1G014490.7 | Barley | plastid | 57.56 | 60.27 |
| HORVU5Hr1G125600.1 | Barley | golgi, peroxisome, plasma membrane | 54.02 | 57.73 |
| HORVU0Hr1G011280.5 | Barley | cytosol | 48.23 | 57.25 |
| HORVU2Hr1G038740.1 | Barley | golgi, mitochondrion, plasma membrane | 62.7 | 57.18 |
| HORVU2Hr1G010990.2 | Barley | plasma membrane | 58.2 | 56.92 |
| HORVU6Hr1G014300.1 | Barley | cytosol, golgi, peroxisome | 53.05 | 56.51 |
| HORVU5Hr1G084230.1 | Barley | extracellular, golgi, mitochondrion | 55.63 | 55.63 |
| HORVU5Hr1G027240.4 | Barley | plasma membrane | 56.59 | 55.35 |
| HORVU5Hr1G029550.2 | Barley | plasma membrane | 56.27 | 55.03 |
| HORVU2Hr1G089820.6 | Barley | golgi | 38.91 | 42.31 |
| HORVU7Hr1G038940.1 | Barley | golgi | 26.37 | 40.2 |
| HORVU7Hr1G081770.8 | Barley | plasma membrane | 27.65 | 34.54 |
| HORVU0Hr1G032130.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 27.33 | 34.14 |
| HORVU6Hr1G062980.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 27.33 | 34.14 |
| HORVU3Hr1G116790.2 | Barley | vacuole | 27.65 | 34.13 |
| HORVU4Hr1G079230.1 | Barley | vacuole | 25.72 | 32.0 |
| HORVU1Hr1G043890.2 | Barley | mitochondrion | 25.4 | 30.04 |
| HORVU4Hr1G085250.2 | Barley | plastid | 21.54 | 22.26 |
| HORVU3Hr1G031620.5 | Barley | nucleus, peroxisome, plastid | 22.51 | 22.01 |
| HORVU2Hr1G097780.15 | Barley | golgi, mitochondrion, plastid | 18.33 | 21.19 |
| HORVU3Hr1G031680.1 | Barley | vacuole | 13.83 | 16.04 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | UniProt:A0A287R9Z4 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:HORVU5Hr1G055200 | EnsemblPlants:HORVU5Hr1G055200.4 | InterPro:IPR023271 | InterPro:MIP |
| InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF262 |
| SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI000B467F0C | SEG:seg | : |
Description
No Description!
Coordinates
chrchr5H:+:432818379..432819964
Molecular Weight (calculated)
32837.7 Da
IEP (calculated)
8.566
GRAVY (calculated)
0.316
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: YTSSSPLPNK LSSSAQASAM EGKEEDVRLG ANRYSERQPI GTAAQGGGAD EKDYKEPPPA PLFEAEELTS WSFYRAGIAE FLATFLFLYI SVLTVMGVVG
101: NPSGSKCGTV GIQGIAWSFG GMIFVLVYCT AGISGGHINP AVTFGLFLAR KLSLTRAVFY MVMQCLGAIC GAGVVKGFQT TLYMGNGGGA NSVAPGYTKG
201: DGLGAEIVGT FVLVYTVFSA TDAKRSARDS HVPILAPLPI GFAVFLVHLA TIPITGTGIN PARSLGAAII YNKKQSWDDH WIFWVGPFTG AALAAIYHVV
301: VIRAIPFKSR D
101: NPSGSKCGTV GIQGIAWSFG GMIFVLVYCT AGISGGHINP AVTFGLFLAR KLSLTRAVFY MVMQCLGAIC GAGVVKGFQT TLYMGNGGGA NSVAPGYTKG
201: DGLGAEIVGT FVLVYTVFSA TDAKRSARDS HVPILAPLPI GFAVFLVHLA TIPITGTGIN PARSLGAAII YNKKQSWDDH WIFWVGPFTG AALAAIYHVV
301: VIRAIPFKSR D
001: MEGKEEDVRV GANKFPERQP IGTSAQSTDK DYKEPPPAPL FEPGELSSWS FYRAGIAEFI ATFLFLYITV LTVMGVKRAP NMCASVGIQG IAWAFGGMIF
101: ALVYCTAGIS GGHINPAVTF GLFLARKLSL TRAVFYMIMQ CLGAICGAGV VKGFQPTPYQ TLGGGANTVA HGYTKGSGLG AEIIGTFVLV YTVFSATDAK
201: RSARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS LGAAIIYNKD HSWDDHWIFW VGPFIGAALA ALYHQIVIRA IPFKSKS
101: ALVYCTAGIS GGHINPAVTF GLFLARKLSL TRAVFYMIMQ CLGAICGAGV VKGFQPTPYQ TLGGGANTVA HGYTKGSGLG AEIIGTFVLV YTVFSATDAK
201: RSARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS LGAAIIYNKD HSWDDHWIFW VGPFIGAALA ALYHQIVIRA IPFKSKS
Arabidopsis Description
PIP1.4TMP-C [Source:UniProtKB/TrEMBL;Acc:A0A178USZ7]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.