Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G00430.1 | Thale cress | golgi, peroxisome, plasma membrane | 97.55 | 97.21 |
| AT3G61430.1 | Thale cress | plasma membrane | 95.45 | 95.45 |
| AT4G23400.1 | Thale cress | plasma membrane | 94.76 | 94.43 |
| GSMUA_AchrUn_... | Banana | extracellular | 59.79 | 90.0 |
| GSMUA_Achr5P12400_001 | Banana | extracellular | 59.79 | 90.0 |
| VIT_13s0067g00220.t01 | Wine grape | plasma membrane | 89.51 | 89.51 |
| PGSC0003DMT400000151 | Potato | cytosol, peroxisome, plasma membrane | 88.81 | 89.12 |
| TraesCS6B01G398000.1 | Wheat | extracellular | 39.86 | 89.06 |
| Solyc01g094690.2.1 | Tomato | nucleus | 88.11 | 88.42 |
| Os04t0559700-01 | Rice | plasma membrane | 88.81 | 88.19 |
| GSMUA_Achr8P11540_001 | Banana | extracellular | 58.39 | 87.89 |
| TraesCS6B01G279200.1 | Wheat | plastid | 88.81 | 87.59 |
| KRH59918 | Soybean | peroxisome | 87.76 | 87.46 |
| KRH77555 | Soybean | plasma membrane | 87.41 | 87.41 |
| KRH27918 | Soybean | plasma membrane | 87.41 | 87.41 |
| PGSC0003DMT400012780 | Potato | cytosol, peroxisome, plasma membrane | 87.76 | 87.15 |
| TraesCS2B01G425600.1 | Wheat | golgi, plasma membrane | 87.76 | 87.15 |
| PGSC0003DMT400014809 | Potato | peroxisome | 87.41 | 87.11 |
| Solyc08g008050.2.1 | Tomato | peroxisome | 87.41 | 87.11 |
| HORVU6Hr1G064140.1 | Barley | golgi, peroxisome, plasma membrane | 88.11 | 86.9 |
| Zm00001d017526_P001 | Maize | plasma membrane | 87.76 | 86.85 |
| EES07484 | Sorghum | plasma membrane | 87.76 | 86.85 |
| GSMUA_AchrUn_... | Banana | extracellular | 57.69 | 86.84 |
| Solyc12g056220.1.1 | Tomato | plastid | 87.41 | 86.81 |
| KRH66037 | Soybean | golgi, peroxisome, plasma membrane | 86.01 | 86.62 |
| TraesCS6D01G227500.1 | Wheat | golgi | 87.76 | 86.55 |
| Os02t0666200-01 | Rice | plasma membrane | 87.41 | 86.51 |
| KRH41192 | Soybean | endoplasmic reticulum | 87.41 | 86.51 |
| Zm00001d002690_P001 | Maize | plasma membrane | 87.06 | 86.46 |
| PGSC0003DMT400053479 | Potato | plasma membrane | 86.36 | 86.36 |
| Zm00001d051403_P001 | Maize | plasma membrane | 88.11 | 86.3 |
| EES11257 | Sorghum | cytosol, peroxisome, plasma membrane | 86.71 | 86.11 |
| PGSC0003DMT400032134 | Potato | cytosol, peroxisome, plasma membrane | 86.01 | 86.01 |
| Solyc08g081190.2.1 | Tomato | plastid | 86.01 | 86.01 |
| TraesCS2B01G605900.1 | Wheat | golgi, peroxisome, plasma membrane | 86.36 | 85.47 |
| Solyc03g096290.2.1 | Tomato | nucleus | 85.31 | 85.31 |
| TraesCS6B01G450000.1 | Wheat | unclear | 87.06 | 85.27 |
| TraesCS6D01G389400.1 | Wheat | plasma membrane | 87.06 | 85.27 |
| TraesCS6D01G389500.1 | Wheat | plasma membrane | 86.36 | 84.59 |
| TraesCS6B01G450200.1 | Wheat | plastid | 86.01 | 84.25 |
| TraesCS5D01G185400.1 | Wheat | plasma membrane | 85.66 | 83.9 |
| TraesCS5B01G178700.1 | Wheat | plasma membrane | 85.66 | 83.9 |
| Zm00001d051872_P001 | Maize | plasma membrane | 84.27 | 83.68 |
| KRH00178 | Soybean | golgi, peroxisome, plasma membrane | 83.57 | 83.28 |
| AT2G45960.3 | Thale cress | golgi, peroxisome, plasma membrane | 86.71 | 82.39 |
| OQU85985 | Sorghum | cytosol, peroxisome, plasma membrane | 82.52 | 81.38 |
| HORVU5Hr1G055200.4 | Barley | golgi, plastid | 85.31 | 78.46 |
| EER89434 | Sorghum | peroxisome | 81.12 | 78.38 |
| TraesCS2D01G404800.2 | Wheat | golgi, peroxisome, plasma membrane | 80.77 | 73.57 |
| AT2G16850.1 | Thale cress | plasma membrane | 69.23 | 71.22 |
| AT4G35100.1 | Thale cress | plasma membrane | 69.23 | 70.71 |
| AT3G53420.1 | Thale cress | plasma membrane | 69.58 | 69.34 |
| AT2G37180.1 | Thale cress | plasma membrane | 67.83 | 68.07 |
| AT3G54820.1 | Thale cress | plasma membrane | 67.48 | 67.48 |
| TraesCS2A01G407700.2 | Wheat | golgi, peroxisome, plasma membrane | 67.83 | 67.13 |
| AT5G60660.1 | Thale cress | plasma membrane | 67.83 | 66.67 |
| AT2G39010.1 | Thale cress | plasma membrane | 66.78 | 66.09 |
| KRH75838 | Soybean | golgi, peroxisome, plasma membrane | 83.22 | 65.56 |
| AT2G37170.2 | Thale cress | plasma membrane | 68.88 | 60.06 |
| AT3G16240.1 | Thale cress | plasma membrane | 31.47 | 36.0 |
| AT2G25810.1 | Thale cress | cytosol, golgi, plasma membrane | 30.07 | 34.54 |
| AT4G01470.1 | Thale cress | cytosol, golgi, plasma membrane | 30.42 | 34.52 |
| AT4G17340.1 | Thale cress | golgi, plasma membrane, vacuole | 30.07 | 34.4 |
| AT5G47450.1 | Thale cress | golgi, plasma membrane | 30.07 | 34.4 |
| AT1G73190.1 | Thale cress | plasma membrane | 31.47 | 33.58 |
| AT1G17810.1 | Thale cress | cytosol, golgi, plasma membrane | 31.12 | 33.33 |
| AT3G26520.1 | Thale cress | plasma membrane | 27.97 | 31.62 |
| AT2G36830.1 | Thale cress | golgi, plasma membrane, vacuole | 27.62 | 31.47 |
| AT3G47440.1 | Thale cress | mitochondrion, plastid | 25.87 | 28.91 |
| AT1G52180.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 11.54 | 26.61 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | EntrezGene:839235 | UniProt:A0A178WIA6 | ProteinID:AAF81320.1 | ProteinID:AEE27312.1 |
| ProteinID:AEE27313.1 | EMBL:AF348574 | ArrayExpress:AT1G01620 | EnsemblPlantsGene:AT1G01620 | RefSeq:AT1G01620 | TAIR:AT1G01620 |
| RefSeq:AT1G01620-TAIR-G | EnsemblPlants:AT1G01620.1 | TAIR:AT1G01620.1 | EMBL:AY062610 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
| EMBL:BT002101 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 |
| GO:GO:0006833 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009414 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009628 | GO:GO:0015250 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 |
| GO:GO:0055085 | InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | RefSeq:NP_001077441.1 | RefSeq:NP_171668.1 |
| ProteinID:OAP17986.1 | PFAM:PF00230 | Symbol:PIP1C | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF202 | UniProt:Q08733 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix |
| UniParc:UPI00000016DF | EMBL:X69294 | EMBL:X75882 | SEG:seg | : | : |
Description
PIP1-3TMP-B [Source:UniProtKB/TrEMBL;Acc:A0A178WIA6]
Coordinates
chr1:-:225665..227543
Molecular Weight (calculated)
30634.3 Da
IEP (calculated)
9.084
GRAVY (calculated)
0.381
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGKEEDVRV GANKFPERQP IGTSAQTDKD YKEPPPAPFF EPGELSSWSF YRAGIAEFIA TFLFLYITVL TVMGVKRAPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVFYIVMQC LGAICGAGVV KGFQPNPYQT LGGGANTVAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH AWDDHWIFWV GPFIGAALAA LYHQLVIRAI PFKSRS
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVFYIVMQC LGAICGAGVV KGFQPNPYQT LGGGANTVAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH AWDDHWIFWV GPFIGAALAA LYHQLVIRAI PFKSRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.