Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007100.1-P | Field mustard | plasma membrane | 94.76 | 94.76 |
| CDX78265 | Canola | plasma membrane | 94.76 | 94.76 |
| CDX73446 | Canola | peroxisome | 94.41 | 94.41 |
| CDX67611 | Canola | plasma membrane | 93.71 | 93.71 |
| CDY07519 | Canola | plasma membrane | 93.36 | 93.36 |
| Bra003196.1-P | Field mustard | plasma membrane | 93.01 | 93.01 |
| TraesCS2A01G198500.1 | Wheat | plasma membrane | 81.47 | 80.34 |
| TraesCS2D01G206300.1 | Wheat | golgi | 81.12 | 80.0 |
| TraesCS2B01G225900.1 | Wheat | golgi | 81.12 | 80.0 |
| EER98451 | Sorghum | plasma membrane | 80.77 | 79.66 |
| Zm00001d019563_P006 | Maize | plasma membrane | 80.42 | 79.31 |
| Os07t0448800-01 | Rice | plasma membrane | 80.42 | 79.31 |
| Zm00001d005421_P001 | Maize | plasma membrane | 79.72 | 78.08 |
| AT2G16850.1 | Thale cress | plasma membrane | 75.87 | 78.06 |
| VIT_08s0040g01890.t01 | Wine grape | plasma membrane | 78.32 | 78.05 |
| AT2G39010.1 | Thale cress | plasma membrane | 78.67 | 77.85 |
| AT3G53420.1 | Thale cress | plasma membrane | 77.97 | 77.7 |
| AT2G37180.1 | Thale cress | plasma membrane | 77.27 | 77.54 |
| AT4G35100.1 | Thale cress | plasma membrane | 74.48 | 76.07 |
| AT5G60660.1 | Thale cress | plasma membrane | 75.87 | 74.57 |
| HORVU2Hr1G038740.1 | Barley | golgi, mitochondrion, plasma membrane | 81.47 | 68.33 |
| AT2G37170.2 | Thale cress | plasma membrane | 78.32 | 68.29 |
| AT1G01620.1 | Thale cress | golgi, peroxisome, plasma membrane | 67.48 | 67.48 |
| AT4G00430.1 | Thale cress | golgi, peroxisome, plasma membrane | 67.48 | 67.25 |
| AT4G23400.1 | Thale cress | plasma membrane | 67.13 | 66.9 |
| AT3G61430.1 | Thale cress | plasma membrane | 65.73 | 65.73 |
| AT2G45960.3 | Thale cress | golgi, peroxisome, plasma membrane | 61.19 | 58.14 |
| AT4G01470.1 | Thale cress | cytosol, golgi, plasma membrane | 32.17 | 36.51 |
| AT5G47450.1 | Thale cress | golgi, plasma membrane | 31.82 | 36.4 |
| AT3G16240.1 | Thale cress | plasma membrane | 31.82 | 36.4 |
| AT3G26520.1 | Thale cress | plasma membrane | 31.47 | 35.57 |
| AT4G17340.1 | Thale cress | golgi, plasma membrane, vacuole | 30.77 | 35.2 |
| AT2G36830.1 | Thale cress | golgi, plasma membrane, vacuole | 30.07 | 34.26 |
| AT2G25810.1 | Thale cress | cytosol, golgi, plasma membrane | 28.67 | 32.93 |
| AT1G73190.1 | Thale cress | plasma membrane | 30.77 | 32.84 |
| AT1G17810.1 | Thale cress | cytosol, golgi, plasma membrane | 29.37 | 31.46 |
| AT3G47440.1 | Thale cress | mitochondrion, plastid | 23.78 | 26.56 |
| AT1G52180.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 10.84 | 25.0 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | EntrezGene:824647 | ProteinID:AEE79295.1 | EMBL:AF370351 | ArrayExpress:AT3G54820 |
| EnsemblPlantsGene:AT3G54820 | RefSeq:AT3G54820 | TAIR:AT3G54820 | RefSeq:AT3G54820-TAIR-G | EnsemblPlants:AT3G54820.1 | TAIR:AT3G54820.1 |
| EMBL:AY062981 | EMBL:AY084843 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | EMBL:BT000670 | ProteinID:CAB41102.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 | GO:GO:0015250 |
| GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0055085 | InterPro:IPR023271 |
| InterPro:MIP | InterPro:MIP_CS | RefSeq:NP_191042.1 | PFAM:PF00230 | Symbol:PIP2D | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009052 | PO:PO:0020038 | PO:PO:0025022 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF167 | UniProt:Q9SV31 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI000005EC72 |
Description
PIP2-5Probable aquaporin PIP2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV31]
Coordinates
chr3:+:20301759..20304309
Molecular Weight (calculated)
30591.4 Da
IEP (calculated)
9.046
GRAVY (calculated)
0.506
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKEVVGDKR SFSGKDYQDP PPEPLFDATE LGKWSFYRAL IAEFIATLLF LYVTIMTVIG YKSQTDPALN PDQCTGVGVL GIAWAFGGMI FILVYCTAGI
101: SGGHINPAVT FGLLLARKVT LVRAVMYMVA QCLGAICGVA LVKAFQSAYF TRYGGGANGL SDGYSIGTGV AAEIIGTFVL VYTVFSATDP KRSARDSHVP
201: VLAPLPIGFA VFIVHLATIP ITGTGINPAR SLGAAIIYNK DKAWDHHWIF WVGPFAGAAI AAFYHQFVLR AGAIKALGSF RSQPHV
101: SGGHINPAVT FGLLLARKVT LVRAVMYMVA QCLGAICGVA LVKAFQSAYF TRYGGGANGL SDGYSIGTGV AAEIIGTFVL VYTVFSATDP KRSARDSHVP
201: VLAPLPIGFA VFIVHLATIP ITGTGINPAR SLGAAIIYNK DKAWDHHWIF WVGPFAGAAI AAFYHQFVLR AGAIKALGSF RSQPHV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.