Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10936 | Canola | plasma membrane | 97.56 | 97.56 |
| Bra019307.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 97.21 | 97.21 |
| CDX94185 | Canola | plasma membrane | 96.17 | 96.17 |
| AT1G01620.1 | Thale cress | golgi, peroxisome, plasma membrane | 94.43 | 94.76 |
| AT4G00430.1 | Thale cress | golgi, peroxisome, plasma membrane | 93.73 | 93.73 |
| GSMUA_AchrUn_... | Banana | extracellular | 61.67 | 93.16 |
| AT3G61430.1 | Thale cress | plasma membrane | 91.99 | 92.31 |
| GSMUA_Achr5P12400_001 | Banana | extracellular | 59.93 | 90.53 |
| GSMUA_Achr8P11540_001 | Banana | extracellular | 59.93 | 90.53 |
| VIT_13s0067g00220.t01 | Wine grape | plasma membrane | 89.9 | 90.21 |
| GSMUA_AchrUn_... | Banana | extracellular | 59.58 | 90.0 |
| TraesCS6B01G398000.1 | Wheat | extracellular | 40.07 | 89.84 |
| Os04t0559700-01 | Rice | plasma membrane | 89.2 | 88.89 |
| PGSC0003DMT400000151 | Potato | cytosol, peroxisome, plasma membrane | 88.15 | 88.77 |
| TraesCS2B01G425600.1 | Wheat | golgi, plasma membrane | 88.85 | 88.54 |
| Solyc01g094690.2.1 | Tomato | nucleus | 87.46 | 88.07 |
| TraesCS6B01G279200.1 | Wheat | plastid | 88.85 | 87.93 |
| Zm00001d017526_P001 | Maize | plasma membrane | 88.5 | 87.89 |
| KRH59918 | Soybean | peroxisome | 87.8 | 87.8 |
| KRH27918 | Soybean | plasma membrane | 87.46 | 87.76 |
| HORVU6Hr1G064140.1 | Barley | golgi, peroxisome, plasma membrane | 88.5 | 87.59 |
| EES07484 | Sorghum | plasma membrane | 88.15 | 87.54 |
| KRH41192 | Soybean | endoplasmic reticulum | 88.15 | 87.54 |
| TraesCS6D01G227500.1 | Wheat | golgi | 88.15 | 87.24 |
| Os02t0666200-01 | Rice | plasma membrane | 87.8 | 87.2 |
| KRH77555 | Soybean | plasma membrane | 86.76 | 87.06 |
| Zm00001d051403_P001 | Maize | plasma membrane | 88.5 | 86.99 |
| TraesCS2B01G605900.1 | Wheat | golgi, peroxisome, plasma membrane | 87.46 | 86.85 |
| Zm00001d002690_P001 | Maize | plasma membrane | 87.11 | 86.81 |
| KRH66037 | Soybean | golgi, peroxisome, plasma membrane | 85.71 | 86.62 |
| EES11257 | Sorghum | cytosol, peroxisome, plasma membrane | 86.76 | 86.46 |
| PGSC0003DMT400053479 | Potato | plasma membrane | 85.71 | 86.01 |
| PGSC0003DMT400012780 | Potato | cytosol, peroxisome, plasma membrane | 86.06 | 85.76 |
| Solyc12g056220.1.1 | Tomato | plastid | 86.06 | 85.76 |
| PGSC0003DMT400014809 | Potato | peroxisome | 85.37 | 85.37 |
| Solyc03g096290.2.1 | Tomato | nucleus | 85.02 | 85.31 |
| TraesCS6B01G450000.1 | Wheat | unclear | 86.76 | 85.27 |
| TraesCS6D01G389400.1 | Wheat | plasma membrane | 86.76 | 85.27 |
| Solyc08g008050.2.1 | Tomato | peroxisome | 85.02 | 85.02 |
| Zm00001d051872_P001 | Maize | plasma membrane | 85.02 | 84.72 |
| Solyc08g081190.2.1 | Tomato | plastid | 84.32 | 84.62 |
| TraesCS6D01G389500.1 | Wheat | plasma membrane | 86.06 | 84.59 |
| TraesCS6B01G450200.1 | Wheat | plastid | 85.71 | 84.25 |
| PGSC0003DMT400032134 | Potato | cytosol, peroxisome, plasma membrane | 83.62 | 83.92 |
| TraesCS5D01G185400.1 | Wheat | plasma membrane | 85.02 | 83.56 |
| TraesCS5B01G178700.1 | Wheat | plasma membrane | 85.02 | 83.56 |
| KRH00178 | Soybean | golgi, peroxisome, plasma membrane | 82.93 | 82.93 |
| OQU85985 | Sorghum | cytosol, peroxisome, plasma membrane | 82.93 | 82.07 |
| AT2G45960.3 | Thale cress | golgi, peroxisome, plasma membrane | 83.62 | 79.73 |
| HORVU5Hr1G055200.4 | Barley | golgi, plastid | 85.02 | 78.46 |
| EER89434 | Sorghum | peroxisome | 80.49 | 78.04 |
| TraesCS2D01G404800.2 | Wheat | golgi, peroxisome, plasma membrane | 82.23 | 75.16 |
| AT4G35100.1 | Thale cress | plasma membrane | 68.64 | 70.36 |
| AT2G16850.1 | Thale cress | plasma membrane | 67.94 | 70.14 |
| AT3G53420.1 | Thale cress | plasma membrane | 69.34 | 69.34 |
| TraesCS2A01G407700.2 | Wheat | golgi, peroxisome, plasma membrane | 68.99 | 68.51 |
| AT2G37180.1 | Thale cress | plasma membrane | 67.25 | 67.72 |
| AT3G54820.1 | Thale cress | plasma membrane | 66.9 | 67.13 |
| AT5G60660.1 | Thale cress | plasma membrane | 67.25 | 66.32 |
| AT2G39010.1 | Thale cress | plasma membrane | 66.55 | 66.09 |
| KRH75838 | Soybean | golgi, peroxisome, plasma membrane | 82.93 | 65.56 |
| AT2G37170.2 | Thale cress | plasma membrane | 67.6 | 59.15 |
| AT3G16240.1 | Thale cress | plasma membrane | 31.01 | 35.6 |
| AT4G17340.1 | Thale cress | golgi, plasma membrane, vacuole | 30.66 | 35.2 |
| AT5G47450.1 | Thale cress | golgi, plasma membrane | 30.31 | 34.8 |
| AT4G01470.1 | Thale cress | cytosol, golgi, plasma membrane | 30.31 | 34.52 |
| AT2G25810.1 | Thale cress | cytosol, golgi, plasma membrane | 28.92 | 33.33 |
| AT1G17810.1 | Thale cress | cytosol, golgi, plasma membrane | 31.01 | 33.33 |
| AT1G73190.1 | Thale cress | plasma membrane | 31.01 | 33.21 |
| AT2G36830.1 | Thale cress | golgi, plasma membrane, vacuole | 28.22 | 32.27 |
| AT3G26520.1 | Thale cress | plasma membrane | 28.22 | 32.02 |
| AT3G47440.1 | Thale cress | mitochondrion, plastid | 26.48 | 29.69 |
| AT1G52180.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 10.8 | 25.0 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | EntrezGene:828439 | UniProt:A0A178V129 | ProteinID:AEE84748.1 | ArrayExpress:AT4G23400 |
| EnsemblPlantsGene:AT4G23400 | RefSeq:AT4G23400 | TAIR:AT4G23400 | RefSeq:AT4G23400-TAIR-G | EnsemblPlants:AT4G23400.1 | TAIR:AT4G23400.1 |
| EMBL:AY059948 | EMBL:AY081593 | EMBL:AY087945 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | ProteinID:CAA20461.1 |
| ProteinID:CAB79295.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 |
| GO:GO:0009506 | GO:GO:0015250 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 |
| GO:GO:0055085 | InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | RefSeq:NP_194071.1 | ProteinID:OAO98762.1 |
| PFAM:PF00230 | Symbol:PIP1D | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF190 | UniProt:Q8LAA6 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI000009CD19 |
| SEG:seg | : | : | : | : | : |
Description
PIP1-5PIP1D [Source:UniProtKB/TrEMBL;Acc:A0A178V129]
Coordinates
chr4:+:12220641..12222468
Molecular Weight (calculated)
30648.4 Da
IEP (calculated)
9.076
GRAVY (calculated)
0.401
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGKEEDVNV GANKFPERQP IGTAAQTESK DYKEPPPAPF FEPGELKSWS FYRAGIAEFI ATFLFLYVTV LTVMGVKRAP NMCASVGIQG IAWAFGGMIF
101: ALVYCTAGIS GGHINPAVTF GLFLARKLSL TRALFYIVMQ CLGAICGAGV VKGFQPGLYQ TNGGGANVVA HGYTKGSGLG AEIVGTFVLV YTVFSATDAK
201: RSARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS LGAAIIYNKD HAWDDHWIFW VGPFIGAALA ALYHQIVIRA IPFKSKT
101: ALVYCTAGIS GGHINPAVTF GLFLARKLSL TRALFYIVMQ CLGAICGAGV VKGFQPGLYQ TNGGGANVVA HGYTKGSGLG AEIVGTFVLV YTVFSATDAK
201: RSARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS LGAAIIYNKD HAWDDHWIFW VGPFIGAALA ALYHQIVIRA IPFKSKT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.