Factsheet for Bra019307.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003196.1-P
Bra005215.1-P
Bra005216.1-P
Bra007100.1-P
Bra011585.1-P
Bra017697.1-P
Bra023102.1-P
Bra023103.1-P
Bra034675.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23400.1	Bra005215.1-P	AT2G37180.1	21798944
AT4G23400.1	Bra005216.1-P	AT2G37180.1	21798944
AT4G23400.1	Bra023102.1-P	AT2G37180.1	21798944
AT4G23400.1	Bra023103.1-P	AT2G37180.1	21798944
AT4G23400.1	Bra003196.1-P	AT3G54820.1	21798944
AT4G23400.1	Bra007100.1-P	AT3G54820.1	21798944
AT4G23400.1	Bra011585.1-P	AT4G35100.1	21798944
AT4G23400.1	Bra017697.1-P	AT4G35100.1	21798944
AT4G23400.1	Bra034675.1-P	AT4G35100.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10936	Canola	plasma membrane	99.3	99.3
AT4G23400.1	Thale cress	plasma membrane	97.21	97.21
CDX94185	Canola	plasma membrane	97.21	97.21
Bra032644.1-P	Field mustard	plasma membrane	92.68	93.01
Bra033248.1-P	Field mustard	cytosol, peroxisome, plasma membrane	91.64	91.96
Bra000974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	91.99	91.67
Bra004950.1-P	Field mustard	cytosol, peroxisome, plasma membrane	89.9	90.21
Bra007603.1-P	Field mustard	plasma membrane	89.55	89.86
VIT_13s0067g00220.t01	Wine grape	plasma membrane	89.2	89.51
Bra014437.1-P	Field mustard	plasma membrane	89.2	89.51
PGSC0003DMT400000151	Potato	cytosol, peroxisome, plasma membrane	86.41	87.02
KRH59918	Soybean	peroxisome	86.76	86.76
KRH27918	Soybean	plasma membrane	86.41	86.71
KRH77555	Soybean	plasma membrane	86.41	86.71
KRH41192	Soybean	endoplasmic reticulum	87.11	86.51
Solyc01g094690.2.1	Tomato	nucleus	85.71	86.32
KRH66037	Soybean	golgi, peroxisome, plasma membrane	84.67	85.56
PGSC0003DMT400012780	Potato	cytosol, peroxisome, plasma membrane	85.71	85.42
Solyc12g056220.1.1	Tomato	plastid	85.37	85.07
PGSC0003DMT400014809	Potato	peroxisome	84.67	84.67
PGSC0003DMT400053479	Potato	plasma membrane	84.32	84.62
Solyc08g008050.2.1	Tomato	peroxisome	84.32	84.32
Solyc03g096290.2.1	Tomato	nucleus	83.62	83.92
Solyc08g081190.2.1	Tomato	plastid	83.62	83.92
PGSC0003DMT400032134	Potato	cytosol, peroxisome, plasma membrane	83.28	83.57
KRH00178	Soybean	golgi, peroxisome, plasma membrane	83.28	83.28
Bra039301.1-P	Field mustard	cytosol, peroxisome, plasma membrane	80.14	82.14
Bra011585.1-P	Field mustard	plasma membrane	68.29	69.75
Bra034675.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.94	69.39
Bra005216.1-P	Field mustard	cytosol, golgi, plasma membrane	55.4	68.83
Bra017697.1-P	Field mustard	cytosol	66.9	68.33
Bra002462.1-P	Field mustard	cytosol	61.67	68.08
Bra006650.1-P	Field mustard	plasma membrane	67.6	68.07
Bra023102.1-P	Field mustard	plasma membrane	66.9	67.84
Bra020238.1-P	Field mustard	plasma membrane	66.9	67.84
Bra007100.1-P	Field mustard	plasma membrane	67.25	67.48
Bra003196.1-P	Field mustard	plasma membrane	67.25	67.48
TraesCS2A01G407700.2	Wheat	golgi, peroxisome, plasma membrane	67.6	67.13
Bra023103.1-P	Field mustard	plasma membrane	66.55	67.02
Bra006997.1-P	Field mustard	plasma membrane	66.9	66.9
Bra000111.1-P	Field mustard	plasma membrane	65.85	65.62
KRH75838	Soybean	golgi, peroxisome, plasma membrane	81.88	64.74
Bra005215.1-P	Field mustard	cytosol, peroxisome, plasma membrane	53.31	64.29
Bra027181.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	31.36	36.29
Bra001626.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	31.36	36.14
Bra021171.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	25.78	35.24
Bra026245.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	29.97	34.4
Bra022131.1-P	Field mustard	extracellular	24.39	34.31
Bra037415.1-P	Field mustard	cytosol	29.97	34.13
Bra032937.1-P	Field mustard	plasma membrane	29.27	33.2
Bra008079.1-P	Field mustard	golgi, mitochondrion, plasma membrane	30.66	33.08
Bra025947.1-P	Field mustard	cytosol, golgi, plasma membrane	30.66	32.96
Bra025210.1-P	Field mustard	plasma membrane	28.92	32.81
Bra024943.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	28.57	32.67
Bra017222.1-P	Field mustard	cytosol	28.57	32.67
Bra016014.1-P	Field mustard	cytosol	29.97	32.45
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	27.87	32.13
Bra031005.1-P	Field mustard	golgi, mitochondrion, plasma membrane	29.62	31.84
Bra018148.1-P	Field mustard	extracellular, plasma membrane, plastid	25.78	29.02

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra019307	EnsemblPlants:Bra019307.1
EnsemblPlants:Bra019307.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0009506	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	InterPro:IPR023271	UniProt:M4DS14	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230
PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF190	SUPFAM:SSF81338	TIGRFAMs:TIGR00861
TMHMM:TMhelix	UniParc:UPI0002540E8F	SEG:seg	:	:	:

Description

AT4G23400 (E=6e-155) PIP1D, PIP1;5 | PIP1;5 (PLASMA MEMBRANE INTRINSIC PROTEIN 1;5); water channel

Coordinates

chrA03:+:25057063..25058184

Molecular Weight (calculated)

30765.5 Da

IEP (calculated)

9.076

GRAVY (calculated)

0.364

Length

287 amino acids

Sequence
(BLAST)

001: MEGKEEDVNV GANKFPERQP IGTAAQTEGK DYKEPPPAPF FEPGELKSWS FYRAGIAEFI ATFLFLYVTV LTVMGVKRAP NMCASVGIQG IAWAFGGMIF
101: ALVYCTAGIS GGHINPAVTF GLFLARKLSL TRTVFYIVMQ CLGAMCGAGV VKGFQPWPYQ SNGGGANLVA HGYTKGSGLG AEIVGTFVLV YTVFSATDAK
201: RSARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS LGAAIIYNKD HAWDDHWIFW VGPFIGAALA ALYHQIVIRA IPFKSKT

Best Arabidopsis Sequence Match ( AT4G23400.1 )
(BLAST)

001: MEGKEEDVNV GANKFPERQP IGTAAQTESK DYKEPPPAPF FEPGELKSWS FYRAGIAEFI ATFLFLYVTV LTVMGVKRAP NMCASVGIQG IAWAFGGMIF
101: ALVYCTAGIS GGHINPAVTF GLFLARKLSL TRALFYIVMQ CLGAICGAGV VKGFQPGLYQ TNGGGANVVA HGYTKGSGLG AEIVGTFVLV YTVFSATDAK
201: RSARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS LGAAIIYNKD HAWDDHWIFW VGPFIGAALA ALYHQIVIRA IPFKSKT

Arabidopsis Description

PIP1-5PIP1D [Source:UniProtKB/TrEMBL;Acc:A0A178V129]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.