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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_02s0025g02450.t01
VIT_03s0038g02520.t01
VIT_06s0080g00970.t01
VIT_08s0040g01890.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G01620.1 VIT_03s0038g02520.t01 AT2G16850.1 21798944
AT1G01620.1 VIT_08s0040g01890.t01 AT3G54820.1 21798944
AT1G01620.1 VIT_06s0080g00970.t01 AT5G22290.1 21798944
AT4G00430.1 VIT_03s0038g02520.t01 AT2G16850.1 21798944
AT4G00430.1 VIT_08s0040g01890.t01 AT3G54820.1 21798944
AT4G00430.1 VIT_02s0025g02450.t01 AT4G24090.1 21798944
AT4G23400.1 VIT_08s0040g01890.t01 AT3G54820.1 21798944
AT4G23400.1 VIT_03s0038g02520.t01 AT4G35100.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G23400.1 Thale cress plasma membrane 90.21 89.9
CDY10936 Canola plasma membrane 89.86 89.55
AT4G00430.1 Thale cress golgi, peroxisome, plasma membrane 89.86 89.55
AT1G01620.1 Thale cress golgi, peroxisome, plasma membrane 89.51 89.51
Bra019307.1-P Field mustard cytosol, peroxisome, plasma membrane 89.51 89.2
VIT_15s0046g02420.t01 Wine grape peroxisome 89.16 89.16
CDY66913 Canola cytosol, mitochondrion, nucleus 14.34 89.13
CDY38017 Canola plasma membrane 88.81 88.81
CDX95670 Canola cytosol, peroxisome, plasma membrane 88.81 88.81
CDY27346 Canola cytosol, peroxisome, plasma membrane 88.81 88.81
CDY37078 Canola cytosol, peroxisome, plasma membrane 88.81 88.81
CDX83385 Canola cytosol, peroxisome, plasma membrane 88.81 88.81
Bra032644.1-P Field mustard plasma membrane 88.81 88.81
CDY51161 Canola cytosol, peroxisome, plasma membrane 88.81 88.81
CDX74777 Canola cytosol, peroxisome, plasma membrane 88.46 88.46
CDY48920 Canola plasma membrane 88.46 88.46
CDY07221 Canola cytosol, peroxisome, plasma membrane 88.46 88.46
AT3G61430.1 Thale cress plasma membrane 88.46 88.46
CDY18886 Canola cytosol, peroxisome, plasma membrane 88.46 88.46
CDX89115 Canola plasma membrane 69.58 88.44
CDX74334 Canola cytosol, peroxisome, plasma membrane 88.81 88.19
Bra000974.1-P Field mustard cytosol, peroxisome, plasma membrane 88.81 88.19
CDX94185 Canola plasma membrane 88.46 88.15
CDX90046 Canola cytosol, peroxisome, plasma membrane 88.11 88.11
CDX71738 Canola plasma membrane 88.11 88.11
Bra033248.1-P Field mustard cytosol, peroxisome, plasma membrane 88.11 88.11
CDY66912 Canola extracellular 63.29 87.86
CDX91911 Canola cytosol, peroxisome, plasma membrane 88.46 87.85
Bra007603.1-P Field mustard plasma membrane 87.76 87.76
Bra004950.1-P Field mustard cytosol, peroxisome, plasma membrane 87.76 87.76
Bra014437.1-P Field mustard plasma membrane 87.06 87.06
VIT_02s0025g03390.t01 Wine grape peroxisome 86.01 85.71
VIT_15s0046g02410.t01 Wine grape plasma membrane 81.12 81.12
CDY15165 Canola plastid 89.16 78.7
AT2G45960.3 Thale cress golgi, peroxisome, plasma membrane 81.47 77.41
VIT_03s0038g02520.t01 Wine grape plasma membrane 68.53 70.25
VIT_06s0004g02850.t01 Wine grape plasma membrane 68.53 70.0
VIT_13s0019g04280.t01 Wine grape plasma membrane 68.18 68.66
VIT_08s0040g01890.t01 Wine grape plasma membrane 67.83 67.6
VIT_18s0001g06480.t01 Wine grape cytosol, extracellular, vacuole 27.97 56.74
VIT_12s0034g00250.t01 Wine grape cytosol, extracellular, plastid 21.33 51.26
VIT_00s2783g00010.t01 Wine grape extracellular 16.08 37.1
VIT_00s0229g00130.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 30.07 34.4
VIT_09s0002g04020.t01 Wine grape plasma membrane, vacuole 29.02 33.33
VIT_16s0039g00220.t01 Wine grape cytosol 29.72 32.82
VIT_08s0007g04780.t01 Wine grape cytosol 28.67 32.67
VIT_13s0019g00330.t01 Wine grape cytosol, plasma membrane, vacuole 28.67 32.67
VIT_16s0022g00330.t01 Wine grape cytosol, extracellular, plasma membrane, plastid 28.32 32.53
VIT_06s0061g00730.t01 Wine grape cytosol, plasma membrane, vacuole 26.92 30.68
VIT_06s0004g04120.t01 Wine grape cytosol, plasma membrane, vacuole 28.67 30.6
VIT_15s0021g02420.t01 Wine grape extracellular 23.78 27.09
VIT_04s0008g03550.t01 Wine grape plasma membrane 25.87 24.58
Protein Annotations
Gene3D:1.20.1080.10EntrezGene:100233000wikigene:100233000MapMan:24.3.1.2UniProt:A3FA63ProteinID:ABH09322
ProteinID:ABH09322.1ProteinID:ABN14347ProteinID:ABN14347.1ProteinID:AEZ35024ProteinID:AEZ35024.1EMBL:AM474295
InterPro:Aquaporin-likeInterPro:Aquaporin_transptrProteinID:CAN77353ProteinID:CAN77353.1ProteinID:CCB49887ProteinID:CCB49887.1
EMBL:DQ834694EMBL:EF364432EMBL:FN595514GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0005887GO:GO:0006810GO:GO:0006833GO:GO:0008150
GO:GO:0015250GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0034220GO:GO:0055085
EMBL:HQ913643InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230EntrezGene:PIP1;1
wikigene:PIP1;1PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF169SUPFAM:SSF81338
TIGR:TC51776TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI00000420E8ArrayExpress:VIT_13s0067g00220EnsemblPlantsGene:VIT_13s0067g00220
EnsemblPlants:VIT_13s0067g00220.t01unigene:Vvi.24304unigene:Vvi.5433:::
Description
Aquaporin PIP11 [Source:UniProtKB/TrEMBL;Acc:A3FA63]
Coordinates
chr13:-:154711..155950
Molecular Weight (calculated)
30549.1 Da
IEP (calculated)
8.449
GRAVY (calculated)
0.369
Length
286 amino acids
Sequence
(BLAST)
001: MEGKEEDVRV GANKFSERQP IGTAAQGDDK DYKEPPPAPL FEPGELCSWS FYRAGIAEFI ATFLFLYVSV LTVMGVVRAD SKCSTVGIQG IAWAFGGMIF
101: ALVYCTAGIS GGHINPAVTF GLFLARKLSL TRAVYYMVMQ CLGAICGAGV VKGFEKGRYN SLGGGANVVN AGYTKGDGLG AEIVGTFVLV YTVFSATDAK
201: RNARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS LGAAIIYNKD HAWDDHWIFW VGPFIGAALA ALYHQVVIRA IPFKSK
Best Arabidopsis Sequence Match ( AT4G00430.1 )
(BLAST)
001: MEGKEEDVRV GANKFPERQP IGTSAQSTDK DYKEPPPAPL FEPGELSSWS FYRAGIAEFI ATFLFLYITV LTVMGVKRAP NMCASVGIQG IAWAFGGMIF
101: ALVYCTAGIS GGHINPAVTF GLFLARKLSL TRAVFYMIMQ CLGAICGAGV VKGFQPTPYQ TLGGGANTVA HGYTKGSGLG AEIIGTFVLV YTVFSATDAK
201: RSARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS LGAAIIYNKD HSWDDHWIFW VGPFIGAALA ALYHQIVIRA IPFKSKS
Arabidopsis Description
PIP1.4TMP-C [Source:UniProtKB/TrEMBL;Acc:A0A178USZ7]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.