Factsheet for VIT_02s0025g03390.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
plastid 1
peroxisome 2
plasma membrane 3
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0046g02420.t01	Wine grape	peroxisome	90.59	90.91
KRH59918	Soybean	peroxisome	89.9	89.9
KRH41192	Soybean	endoplasmic reticulum	90.24	89.62
KRH27918	Soybean	plasma membrane	86.41	86.71
KRH77555	Soybean	plasma membrane	86.41	86.71
Solyc12g056220.1.1	Tomato	plastid	86.76	86.46
PGSC0003DMT400014809	Potato	peroxisome	86.41	86.41
Solyc08g008050.2.1	Tomato	peroxisome	86.41	86.41
Solyc08g081190.2.1	Tomato	plastid	86.06	86.36
VIT_13s0067g00220.t01	Wine grape	plasma membrane	85.71	86.01
PGSC0003DMT400012780	Potato	cytosol, peroxisome, plasma membrane	85.71	85.42
KRH66037	Soybean	golgi, peroxisome, plasma membrane	84.32	85.21
PGSC0003DMT400032134	Potato	cytosol, peroxisome, plasma membrane	84.32	84.62
Solyc01g094690.2.1	Tomato	nucleus	83.97	84.56
PGSC0003DMT400000151	Potato	cytosol, peroxisome, plasma membrane	83.62	84.21
PGSC0003DMT400053479	Potato	plasma membrane	83.62	83.92
VIT_15s0046g02410.t01	Wine grape	plasma membrane	83.28	83.57
Solyc03g096290.2.1	Tomato	nucleus	82.58	82.87
KRH00178	Soybean	golgi, peroxisome, plasma membrane	81.18	81.18
VIT_06s0004g02850.t01	Wine grape	plasma membrane	67.25	68.93
VIT_03s0038g02520.t01	Wine grape	plasma membrane	66.55	68.46
VIT_13s0019g04280.t01	Wine grape	plasma membrane	67.25	67.96
TraesCS2A01G407700.2	Wheat	golgi, peroxisome, plasma membrane	66.9	66.44
VIT_08s0040g01890.t01	Wine grape	plasma membrane	65.85	65.85
KRH75838	Soybean	golgi, peroxisome, plasma membrane	81.18	64.19
VIT_18s0001g06480.t01	Wine grape	cytosol, extracellular, vacuole	27.18	55.32
VIT_12s0034g00250.t01	Wine grape	cytosol, extracellular, plastid	21.95	52.94
VIT_00s2783g00010.t01	Wine grape	extracellular	15.33	35.48
VIT_00s0229g00130.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	30.31	34.8
VIT_09s0002g04020.t01	Wine grape	plasma membrane, vacuole	29.27	33.73
VIT_08s0007g04780.t01	Wine grape	cytosol	28.92	33.07
VIT_13s0019g00330.t01	Wine grape	cytosol, plasma membrane, vacuole	28.92	33.07
VIT_16s0039g00220.t01	Wine grape	cytosol	29.27	32.43
VIT_06s0061g00730.t01	Wine grape	cytosol, plasma membrane, vacuole	27.53	31.47
VIT_16s0022g00330.t01	Wine grape	cytosol, extracellular, plasma membrane, plastid	27.18	31.33
VIT_06s0004g04120.t01	Wine grape	cytosol, plasma membrane, vacuole	28.92	30.97
VIT_15s0021g02420.t01	Wine grape	extracellular	23.0	26.29
VIT_04s0008g03550.t01	Wine grape	plasma membrane	25.09	23.92

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100233001	wikigene:100233001	MapMan:24.3.1.2	ProteinID:AAF80557	ProteinID:AAF80557.1
ProteinID:ABH09324	ProteinID:ABH09324.1	ProteinID:ABN14349	ProteinID:ABN14349.1	ProteinID:ABN14355	ProteinID:ABN14355.1
EMBL:AF188844	EMBL:AM454917	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	ProteinID:CAN74419	ProteinID:CAN74419.1
ProteinID:CCB58343	ProteinID:CCB58343.1	EMBL:DQ834696	EMBL:EF364434	EMBL:EF364440	EMBL:FN596251
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020
GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS
PFAM:PF00230	EntrezGene:PIP1;3	wikigene:PIP1;3	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF169	UniProt:Q0MX16	SUPFAM:SSF81338	TIGR:TC51722	TIGR:TC52559	TIGR:TC67265
TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI0000DBEA2B	ArrayExpress:VIT_02s0025g03390	EnsemblPlantsGene:VIT_02s0025g03390	EnsemblPlants:VIT_02s0025g03390.t01
unigene:Vvi.6732	:	:	:	:	:

Description

Putative aquaporin [Source:UniProtKB/TrEMBL;Acc:Q0MX16]

Coordinates

chr2:-:2890636..2893718

Molecular Weight (calculated)

30714.7 Da

IEP (calculated)

8.585

GRAVY (calculated)

0.444

Length

287 amino acids

Sequence
(BLAST)

001: MEGKEEDVKL GANKFTERQP LGTAAQTDKD YKDLPPAPLF EPGELKSWSF YRAGIAEFMA TFLFLYITIL TVMGVKKSPT MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LLLARKLSLT RAIFYIIMQC LGAICGAGVV KGFEGSQSYE VLGGGANVVN SGYTKGDGLG AEIVGTFVLV YTVFSATDAK
201: RNARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS LGAAIIFNRE HAWDDMWIFW VGPFIGAALA AMYQQIVIRA IPFKSRA

Best Arabidopsis Sequence Match ( AT2G45960.1 )
(BLAST)

001: MEGKEEDVRV GANKFPERQP IGTSAQSDKD YKEPPPAPLF EPGELASWSF WRAGIAEFIA TFLFLYITVL TVMGVKRSPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVYYIVMQC LGAICGAGVV KGFQPKQYQA LGGGANTIAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: NARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIFNKDN AWDDHWVFWV GPFIGAALAA LYHVIVIRAI PFKSRS

Arabidopsis Description

PIP1BPlasma membrane intrinsic protein 1B [Source:UniProtKB/TrEMBL;Acc:A8MRW1]
SUBAcon: [golgi,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.