Factsheet for VIT_13s0019g04280.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
peroxisome 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g02850.t01	Wine grape	plasma membrane	84.86	86.07
TraesCS2A01G198500.1	Wheat	plasma membrane	85.21	83.45
Os07t0448800-01	Rice	plasma membrane	84.86	83.1
TraesCS2B01G225900.1	Wheat	golgi	84.86	83.1
TraesCS2D01G206300.1	Wheat	golgi	84.86	83.1
EER98451	Sorghum	plasma membrane	84.51	82.76
VIT_08s0040g01890.t01	Wine grape	plasma membrane	83.45	82.58
VIT_03s0038g02520.t01	Wine grape	plasma membrane	80.99	82.44
Zm00001d019563_P006	Maize	plasma membrane	83.8	82.07
Zm00001d005421_P001	Maize	plasma membrane	82.04	79.79
HORVU2Hr1G038740.1	Barley	golgi, mitochondrion, plasma membrane	85.21	70.97
VIT_15s0046g02420.t01	Wine grape	peroxisome	68.66	68.18
VIT_13s0067g00220.t01	Wine grape	plasma membrane	68.66	68.18
VIT_02s0025g03390.t01	Wine grape	peroxisome	67.96	67.25
VIT_15s0046g02410.t01	Wine grape	plasma membrane	64.79	64.34
VIT_18s0001g06480.t01	Wine grape	cytosol, extracellular, vacuole	25.35	51.06
VIT_12s0034g00250.t01	Wine grape	cytosol, extracellular, plastid	20.07	47.9
VIT_13s0019g00330.t01	Wine grape	cytosol, plasma membrane, vacuole	32.04	36.26
VIT_00s0229g00130.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	31.34	35.6
VIT_09s0002g04020.t01	Wine grape	plasma membrane, vacuole	30.99	35.34
VIT_00s2783g00010.t01	Wine grape	extracellular	15.14	34.68
VIT_08s0007g04780.t01	Wine grape	cytosol	30.28	34.26
VIT_06s0004g04120.t01	Wine grape	cytosol, plasma membrane, vacuole	31.34	33.21
VIT_06s0061g00730.t01	Wine grape	cytosol, plasma membrane, vacuole	28.87	32.67
VIT_16s0039g00220.t01	Wine grape	cytosol	28.87	31.66
VIT_16s0022g00330.t01	Wine grape	cytosol, extracellular, plasma membrane, plastid	26.76	30.52
VIT_15s0021g02420.t01	Wine grape	extracellular	23.59	26.69
VIT_04s0008g03550.t01	Wine grape	plasma membrane	28.17	26.58

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100233002	wikigene:100233002	MapMan:24.3.1.2	ProteinID:AAV69744	ProteinID:AAV69744.1
ProteinID:ABH09326	ProteinID:ABH09326.1	ProteinID:ABN14353	ProteinID:ABN14353.1	EMBL:AM486947	EMBL:AY823263
InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	ProteinID:CAN75442	ProteinID:CAN75442.1	ProteinID:CCB56185	ProteinID:CCB56185.1
EMBL:DQ834698	EMBL:EF364438	EMBL:FN595998	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150
GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	EntrezGene:PIP2;1	wikigene:PIP2;1
PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF260	UniProt:Q5PXH0	SUPFAM:SSF81338
TIGR:TC68489	TIGR:TC69190	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI000048E8FB	ArrayExpress:VIT_13s0019g04280
EnsemblPlantsGene:VIT_13s0019g04280	EnsemblPlants:VIT_13s0019g04280.t01	unigene:Vvi.7400	:	:	:

Description

Aquaporin [Source:UniProtKB/TrEMBL;Acc:Q5PXH0]

Coordinates

chr13:-:5602037..5604892

Molecular Weight (calculated)

30292.8 Da

IEP (calculated)

8.298

GRAVY (calculated)

0.527

Length

284 amino acids

Sequence
(BLAST)

001: MTKDVEVAEH GSFSAKDYHD PPPAPLFDSV ELTKWSFYRA LIAEFIATLL FLYITVLTVI GYKSQTAGGD PCGGVGILGI AWSFGGMIFI LVYCTAGISG
101: GHINPAVTFG LFLARKVSLI RAILYMVAQC LGAICGVGLV KAFQSAYYDR YGGGANELST GYSKGTGLGA EIIGTFVLVY TVFSATDPKR SARDSHVPVL
201: APLPIGFAVF MVHLATIPIT GTGINPARSL GAAVIYNNEK AWDDQWIFWV GPFIGAAIAA FYHQFILRAG AVKALGSFRS TTHV

Best Arabidopsis Sequence Match ( AT2G37170.2 )
(BLAST)

001: MRALTIAIVS LYKQLSFVSS VFTNTTYPQY KTQLSYITKK VIEMAKDVEG PEGFQTRDYE DPPPTPFFDA DELTKWSLYR AVIAEFVATL LFLYITVLTV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV

Arabidopsis Description

PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.