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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 plasma membrane: 18622732
extracellular: 20408568
plastid: 22065420
plastid: 23198870
plasma membrane: 23353019
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663
gfp PMID: 18622732 doi
C Hachez, RB Heinen, X Draye, F Chaumont
Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 5-15, 1348 Louvain-la-Neuve, Belgium.
msms PMID: 23353019 doi
D Hopff, S Wienkoop, S Lüthje
University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 23198870 doi
M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
msms PMID: 22065420 doi
W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
msms PMID: 23508561 doi
Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck
Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d002690_P001
Zm00001d005421_P001
Zm00001d008871_P001
Zm00001d010783_P001
Zm00001d017526_P001
Zm00001d019563_P006
Zm00001d038803_P001
Zm00001d051403_P001
Zm00001d051872_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37180.1 Zm00001d002690_P001 AT1G01620.1 21798944
AT2G37180.1 Zm00001d017526_P001 AT1G01620.1 21798944
AT2G37180.1 Zm00001d051403_P001 AT1G01620.1 21798944
AT2G37180.1 Zm00001d051872_P001 AT1G01620.1 21798944
AT2G37180.1 Zm00001d008871_P001 AT3G16310.1 21798944
AT2G37180.1 Zm00001d010783_P001 AT3G16310.1 21798944
AT2G37180.1 Zm00001d038803_P001 AT3G16310.1 21798944
AT2G37180.1 Zm00001d005421_P001 AT3G54820.1 21798944
AT2G37180.1 Zm00001d019563_P006 AT3G54820.1 21798944
AT2G37180.1 Zm00001d002690_P001 AT3G61430.1 21798944
AT2G37180.1 Zm00001d017526_P001 AT3G61430.1 21798944
AT2G37180.1 Zm00001d051403_P001 AT3G61430.1 21798944
AT2G37180.1 Zm00001d051872_P001 AT3G61430.1 21798944
AT2G37180.1 Zm00001d002690_P001 AT4G23400.1 21798944
AT2G37180.1 Zm00001d017526_P001 AT4G23400.1 21798944
AT2G37180.1 Zm00001d051403_P001 AT4G23400.1 21798944
AT2G37180.1 Zm00001d051872_P001 AT4G23400.1 21798944
AT3G53420.1 Zm00001d005421_P001 AT3G53420.1 19258017
AT3G53420.1 Zm00001d019563_P006 AT3G53420.1 19258017
AT3G54820.1 Zm00001d002690_P001 AT1G01620.1 21798944
AT3G54820.1 Zm00001d017526_P001 AT1G01620.1 21798944
AT3G54820.1 Zm00001d051403_P001 AT1G01620.1 21798944
AT3G54820.1 Zm00001d051872_P001 AT1G01620.1 21798944
AT3G54820.1 Zm00001d002690_P001 AT3G61430.1 21798944
AT3G54820.1 Zm00001d017526_P001 AT3G61430.1 21798944
AT3G54820.1 Zm00001d051403_P001 AT3G61430.1 21798944
AT3G54820.1 Zm00001d051872_P001 AT3G61430.1 21798944
AT3G54820.1 Zm00001d002690_P001 AT4G00430.1 21798944
AT3G54820.1 Zm00001d017526_P001 AT4G00430.1 21798944
AT3G54820.1 Zm00001d051403_P001 AT4G00430.1 21798944
AT3G54820.1 Zm00001d051872_P001 AT4G00430.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER98451 Sorghum plasma membrane 99.31 99.31
Zm00001d005421_P001 Maize plasma membrane 96.55 95.89
Os07t0448800-01 Rice plasma membrane 92.76 92.76
TraesCS2A01G198500.1 Wheat plasma membrane 91.03 91.03
TraesCS2B01G225900.1 Wheat golgi 90.69 90.69
TraesCS2D01G206300.1 Wheat golgi 90.69 90.69
KRG91899 Soybean plasma membrane 85.52 87.32
PGSC0003DMT400053882 Potato extracellular 58.62 86.73
Zm00001d017288_P001 Maize plasma membrane 85.52 86.11
CDY70391 Canola extracellular, golgi 46.9 85.53
Zm00001d051174_P002 Maize plasma membrane 85.17 85.47
VIT_06s0004g02850.t01 Wine grape plasma membrane 82.07 85.0
PGSC0003DMT400053877 Potato plasma membrane 81.72 84.95
KRH70183 Soybean mitochondrion 82.41 83.86
Zm00001d003006_P001 Maize plasma membrane 82.41 83.86
VIT_13s0019g04280.t01 Wine grape plasma membrane 82.07 83.8
KRH08523 Soybean plasma membrane 82.07 83.51
KRH08522 Soybean plasma membrane 82.07 83.51
PGSC0003DMT400027154 Potato plasma membrane 80.69 83.27
Bra005216.1-P Field mustard cytosol, golgi, plasma membrane 66.21 83.12
Solyc09g007770.2.1 Tomato nucleus 74.14 83.01
Solyc10g084120.1.1 Tomato nucleus 80.34 82.92
Bra023103.1-P Field mustard plasma membrane 81.38 82.81
Bra023102.1-P Field mustard plasma membrane 80.69 82.69
CDY46758 Canola plasma membrane 80.69 82.69
CDY46759 Canola plasma membrane 81.03 82.46
KRH34875 Soybean plasma membrane 84.14 82.43
KRH29919 Soybean mitochondrion 81.03 82.17
KRH70184 Soybean plasma membrane 80.69 82.11
CDX91340 Canola plasma membrane 80.69 82.11
KRH25011 Soybean mitochondrion 80.69 81.82
AT3G53420.1 Thale cress plasma membrane 80.69 81.53
CDX91341 Canola plasma membrane 80.0 81.4
CDX74983 Canola cytosol, peroxisome, plasma membrane 55.17 81.22
CDX78177 Canola plasma membrane 80.34 81.18
Bra006997.1-P Field mustard plasma membrane 80.34 81.18
Zm00001d005410_P001 Maize plasma membrane 80.0 81.12
Bra005215.1-P Field mustard cytosol, peroxisome, plasma membrane 66.55 81.09
Zm00001d019565_P001 Maize plasma membrane 80.34 80.9
CDY56697 Canola plasma membrane 80.0 80.84
AT3G54820.1 Thale cress plasma membrane 79.31 80.42
CDY07519 Canola plasma membrane 78.62 79.72
CDX67611 Canola plasma membrane 78.62 79.72
AT2G37180.1 Thale cress plasma membrane 78.28 79.65
VIT_08s0040g01890.t01 Wine grape plasma membrane 78.62 79.44
CDY13298 Canola plasma membrane 78.62 79.44
KRH26410 Soybean golgi, peroxisome, plasma membrane 78.28 79.09
KRH22889 Soybean golgi, peroxisome, plasma membrane 77.93 78.75
Bra007100.1-P Field mustard plasma membrane 77.59 78.67
Bra003196.1-P Field mustard plasma membrane 77.59 78.67
CDX78265 Canola plasma membrane 77.59 78.67
CDX73446 Canola peroxisome 77.24 78.32
HORVU2Hr1G038740.1 Barley golgi, mitochondrion, plasma membrane 90.69 77.13
PGSC0003DMT400053881 Potato plasma membrane 81.03 76.55
KRG95980 Soybean plasma membrane 75.17 76.49
KRH67688 Soybean plasma membrane 74.83 75.87
CDX74984 Canola cytosol, peroxisome, plasma membrane 80.69 75.48
Solyc09g007760.2.1 Tomato extracellular 78.62 74.51
Zm00001d014285_P001 Maize plasma membrane 71.72 73.5
AT2G37170.2 Thale cress plasma membrane 80.69 71.34
Zm00001d022608_P001 Maize plasma membrane 67.59 68.06
Zm00001d017526_P001 Maize plasma membrane 65.86 66.09
Zm00001d002690_P001 Maize plasma membrane 65.17 65.62
Zm00001d051403_P001 Maize plasma membrane 65.86 65.41
Zm00001d051872_P001 Maize plasma membrane 64.83 65.28
Zm00001d026177_P001 Maize extracellular 32.76 38.31
Zm00001d002738_P001 Maize plasma membrane 32.41 37.9
Zm00001d051362_P001 Maize plasma membrane 32.07 37.35
Zm00001d011778_P001 Maize plasma membrane 32.41 37.01
Zm00001d027652_P001 Maize plasma membrane 31.03 36.0
Zm00001d017485_P002 Maize endoplasmic reticulum, extracellular, plasma membrane 30.69 35.6
Zm00001d013956_P003 Maize plasma membrane 31.03 34.35
Zm00001d032610_P003 Maize mitochondrion, plastid 31.38 34.21
Zm00001d019676_P001 Maize endoplasmic reticulum, extracellular, plastid 11.72 32.08
Zm00001d015518_P001 Maize endoplasmic reticulum, extracellular 11.72 32.08
Zm00001d037779_P001 Maize cytosol, plasma membrane, vacuole 27.93 31.76
Zm00001d039713_P001 Maize plasma membrane 26.55 30.92
Zm00001d002952_P001 Maize plasma membrane 27.59 30.19
Zm00001d020747_P001 Maize extracellular 11.03 29.91
Zm00001d039293_P001 Maize plastid 27.93 28.22
Zm00001d026178_P002 Maize plastid 24.48 26.59
Zm00001d010410_P001 Maize plasma membrane, plastid 27.24 25.4
Zm00001d048520_P014 Maize mitochondrion 21.72 23.51
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2EntrezGene:541888EMBL:AF326491EMBL:AY243801InterPro:Aquaporin-like
InterPro:Aquaporin_transptrUniProt:B4FA22EMBL:BT033960EMBL:BT039587EMBL:BT041139EMBL:EU959656
GO:GO:0003674GO:GO:0005215GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0006833GO:GO:0008150GO:GO:0009987GO:GO:0015250
GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0016043GO:GO:0032991GO:GO:0043234
GO:GO:0051289GO:GO:0051290GO:GO:0055085InterPro:IPR023271InterPro:MIPInterPro:MIP_CS
ProteinID:ONM53255.1PFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF260
UniProt:Q84RL7SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI00000AB39FEnsemblPlantsGene:Zm00001d019563
EnsemblPlants:Zm00001d019563_P006EnsemblPlants:Zm00001d019563_T006SEG:seg:::
Description
plasma membrane intrinsic protein2Aquaporin PIP2-1
Coordinates
chr7:-:42951729..42954764
Molecular Weight (calculated)
30216.6 Da
IEP (calculated)
7.965
GRAVY (calculated)
0.558
Length
290 amino acids
Sequence
(BLAST)
001: MGKDDVIESG AGGGEFAAKD YTDPPPAPLI DAAELGSWSL YRAVIAEFIA TLLFLYITVA TVIGYKHQTD ASASGADAAC GGVGVLGIAW AFGGMIFVLV
101: YCTAGISGGH INPAVTFGLF LARKVSLVRA LLYIVAQCLG AICGVGLVKA FQSAYFDRYG GGANSLASGY SRGTGLGAEI IGTFVLVYTV FSATDPKRNA
201: RDSHVPVLAP LPIGFAVFMV HLATIPVTGT GINPARSLGA AVIYNKDKPW DDHWIFWVGP LVGAAIAAFY HQYILRAGAI KALGSFRSNA
Best Arabidopsis Sequence Match ( AT2G37170.2 )
(BLAST)
001: MRALTIAIVS LYKQLSFVSS VFTNTTYPQY KTQLSYITKK VIEMAKDVEG PEGFQTRDYE DPPPTPFFDA DELTKWSLYR AVIAEFVATL LFLYITVLTV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV
Arabidopsis Description
PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.