Factsheet for PGSC0003DMT400053881

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400053882	Potato	extracellular	63.19	98.98
PGSC0003DMT400053877	Potato	plasma membrane	89.25	98.21
Solyc09g007770.2.1	Tomato	nucleus	78.83	93.44
PGSC0003DMT400027154	Potato	plasma membrane	80.78	88.26
Solyc09g007760.2.1	Tomato	extracellular	83.71	83.99
KRG91899	Soybean	plasma membrane	77.52	83.8
KRH70183	Soybean	mitochondrion	76.87	82.81
KRH08522	Soybean	plasma membrane	76.55	82.46
KRH08523	Soybean	plasma membrane	76.55	82.46
KRH70184	Soybean	plasma membrane	76.55	82.46
EER98451	Sorghum	plasma membrane	76.87	81.38
Zm00001d019563_P006	Maize	plasma membrane	76.55	81.03
KRH34875	Soybean	plasma membrane	77.52	80.41
Os07t0448800-01	Rice	plasma membrane	75.57	80.0
TraesCS2A01G198500.1	Wheat	plasma membrane	74.92	79.31
PGSC0003DMT400062174	Potato	plasma membrane	73.62	79.02
TraesCS2D01G206300.1	Wheat	golgi	74.59	78.97
TraesCS2B01G225900.1	Wheat	golgi	74.59	78.97
PGSC0003DMT400068708	Potato	plasma membrane	71.66	77.74
Zm00001d005421_P001	Maize	plasma membrane	73.62	77.4
PGSC0003DMT400020870	Potato	plasma membrane	72.31	77.35
PGSC0003DMT400015824	Potato	plasma membrane	70.03	75.97
PGSC0003DMT400009240	Potato	cytosol, extracellular, plasma membrane	60.91	74.5
PGSC0003DMT400053479	Potato	plasma membrane	63.19	67.83
HORVU2Hr1G038740.1	Barley	golgi, mitochondrion, plasma membrane	74.59	67.16
PGSC0003DMT400000151	Potato	cytosol, peroxisome, plasma membrane	61.24	65.96
PGSC0003DMT400014809	Potato	peroxisome	61.56	65.85
PGSC0003DMT400012780	Potato	cytosol, peroxisome, plasma membrane	61.24	65.28
PGSC0003DMT400032134	Potato	cytosol, peroxisome, plasma membrane	60.59	65.03
PGSC0003DMT400060322	Potato	mitochondrion	56.35	62.91
PGSC0003DMT400064008	Potato	extracellular	19.54	53.57
PGSC0003DMT400042613	Potato	cytosol, extracellular, plasma membrane	31.92	39.36
PGSC0003DMT400030994	Potato	endoplasmic reticulum, plasma membrane, vacuole	31.27	38.4
PGSC0003DMT400072432	Potato	cytosol	30.62	37.9
PGSC0003DMT400018375	Potato	cytosol	30.29	37.2
PGSC0003DMT400068047	Potato	cytosol, extracellular, plastid, vacuole	29.97	37.1
PGSC0003DMT400006558	Potato	endoplasmic reticulum, plasma membrane	28.66	35.34
PGSC0003DMT400077927	Potato	cytosol, plasma membrane, plastid, vacuole	28.99	35.18
PGSC0003DMT400024847	Potato	extracellular, plasma membrane, vacuole	26.71	33.2
PGSC0003DMT400069330	Potato	cytosol	27.69	32.82
PGSC0003DMT400039507	Potato	cytosol, golgi, plasma membrane	25.73	30.38
PGSC0003DMT400038394	Potato	plastid	24.43	29.88

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	InterPro:IPR023271	UniProt:M1BVL3	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230
EnsemblPlantsGene:PGSC0003DMG401020908	PGSC:PGSC0003DMG401020908	EnsemblPlants:PGSC0003DMT400053881	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF158	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI000295B4A2	:

Description

Plasma intrinsic protein 2,1 [Source:PGSC_GENE;Acc:PGSC0003DMG401020908]

Coordinates

chr9:-:5803079..5804429

Molecular Weight (calculated)

32804.9 Da

IEP (calculated)

8.105

GRAVY (calculated)

0.505

Length

307 amino acids

Sequence
(BLAST)

001: MGKDIEVGTE YAPKDYQDPP PAPLIDPEEL GKWSFYRAII AEFIATLLFL YITVLTVIGY NSQNSTDQCG GVATLLFLYI TVLTVIGYNS QNSTDQCGGV
101: GILGIAWAFG GMIFVLVYCT AGISGGHINP AVTFGLFLAR KVSLVRAIMY IVAQCLGAIC GCGLVKSFQK AYYVQYGGGA NKLNDGYSTG TGLGAEIIGT
201: FILVYTVFAA TDPKRNARDS HVPVLAPLPI GFAVFMVHLA TIPVTGTGIN PARSFGAAVI YGHHKAWNDQ WIFWVGPFIG AAIAAFYHQF ILRAGAVKAL
301: GSFRSNA

Best Arabidopsis Sequence Match ( AT3G53420.2 )
(BLAST)

001: MAKDVEAVPG EGFQTRDYQD PPPAPFIDGA ELKKWSFYRA VIAEFVATLL FLYITVLTVI GYKIQSDTDA GGVDCGGVGI LGIAWAFGGM IFILVYCTAG
101: ISGGHINPAV TFGLFLARKV SLPRALLYII AQCLGAICGV GFVKAFQSSY YTRYGGGANS LADGYSTGTG LAAEIIGTFV LVYTVFSATD PKRSARDSHV
201: PVLAPLPIGF AVFMVHLATI PITGTGINPA RSFGAAVIYN KSKPWDDHWI FWVGPFIGAA IAAFYHQFVL RASGSKSLGS FRSAANV

Arabidopsis Description

PIP2-1PIP2A [Source:UniProtKB/TrEMBL;Acc:A0A178V8P4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.